RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 GPR55Q9Y2T6 319 aaPredicted RBP13.59□□□□□ -0.23
CXCL12-201ENST00000343575 PTRH2Q9Y3E5 179 aaKnown RBP13.59□□□□□ -0.23
CXCL12-201ENST00000343575 HSPE1-MOB4S4R3N1 261 aa13.59□□□□□ -0.23
CXCL12-201ENST00000343575 LOC102723996A0A087X1L8 192 aa13.58□□□□□ -0.24
CXCL12-201ENST00000343575 A0A0G2JPF8 293 aa13.58□□□□□ -0.24
CXCL12-201ENST00000343575 SAGE2PA6NJ88 616 aa13.58□□□□□ -0.24
CXCL12-201ENST00000343575 HNRNPCL2B2RXH8 293 aa13.58□□□□□ -0.24
CXCL12-201ENST00000343575 HNRNPCL3B7ZW38 293 aa13.58□□□□□ -0.24
CXCL12-201ENST00000343575 C9J4A7 227 aa13.58□□□□□ -0.24
CXCL12-201ENST00000343575 TERTO14746 1132 aaKnown RBP13.58□□□□□ -0.24
CXCL12-201ENST00000343575 SUV39H1O43463 412 aa13.58□□□□□ -0.24
CXCL12-201ENST00000343575 KCNK2O95069 426 aa13.58□□□□□ -0.24
CXCL12-201ENST00000343575 AGR2O95994 175 aa13.58□□□□□ -0.24
CXCL12-201ENST00000343575 CYC1P08574 325 aa13.58□□□□□ -0.24
CXCL12-201ENST00000343575 HNRNPCL4P0DMR1 293 aa13.58□□□□□ -0.24
CXCL12-201ENST00000343575 CD40LGP29965 261 aa13.58□□□□□ -0.24
CXCL12-201ENST00000343575 MVKQ03426 396 aa13.58□□□□□ -0.24
CXCL12-201ENST00000343575 KRR1Q13601 381 aaKnown RBP13.58□□□□□ -0.24
CXCL12-201ENST00000343575 PUM1Q14671 1186 aaKnown RBP eCLIP13.58□□□□□ -0.24
CXCL12-201ENST00000343575 NNATQ16517 81 aa13.58□□□□□ -0.24
CXCL12-201ENST00000343575 ATAD3BQ5T9A4 648 aa13.58□□□□□ -0.24
CXCL12-201ENST00000343575 C16orf62Q7Z3J2 963 aa13.58□□□□□ -0.24
CXCL12-201ENST00000343575 CPEB2Q7Z5Q1 589 aaKnown RBP13.58□□□□□ -0.24
CXCL12-201ENST00000343575 COX18Q8N8Q8 333 aa13.58□□□□□ -0.24
CXCL12-201ENST00000343575 MORN4Q8NDC4 146 aa13.58□□□□□ -0.24
CXCL12-201ENST00000343575 SETD9Q8NE22 299 aa13.58□□□□□ -0.24
CXCL12-201ENST00000343575 OR2Y1Q8NGV0 311 aa13.58□□□□□ -0.24
CXCL12-201ENST00000343575 BBS10Q8TAM1 723 aa13.58□□□□□ -0.24
CXCL12-201ENST00000343575 CT55Q8WUE5 264 aa13.58□□□□□ -0.24
CXCL12-201ENST00000343575 SLC46A1Q96NT5 459 aa13.58□□□□□ -0.24
CXCL12-201ENST00000343575 LMF1Q96S06 567 aa13.58□□□□□ -0.24
CXCL12-201ENST00000343575 SEMA4CQ9C0C4 833 aa13.58□□□□□ -0.24
CXCL12-201ENST00000343575 IL1RAPQ9NPH3 570 aa13.58□□□□□ -0.24
CXCL12-201ENST00000343575 GPN3Q9UHW5 284 aaPredicted RBP13.58□□□□□ -0.24
CXCL12-201ENST00000343575 ORC6Q9Y5N6 252 aa13.58□□□□□ -0.24
CXCL12-201ENST00000343575 DCHS1Q96JQ0 3298 aa13.58□□□□□ -0.24
CXCL12-201ENST00000343575 OXSR1O95747 527 aaPredicted RBP13.57□□□□□ -0.24
CXCL12-201ENST00000343575 F8A1P23610 371 aa13.57□□□□□ -0.24
CXCL12-201ENST00000343575 KCNJ5P48544 419 aa13.57□□□□□ -0.24
CXCL12-201ENST00000343575 AQP6Q13520 282 aa13.57□□□□□ -0.24
CXCL12-201ENST00000343575 EBPQ15125 230 aaKnown RBP13.57□□□□□ -0.24
CXCL12-201ENST00000343575 FIGNL1Q6PIW4 674 aa13.57□□□□□ -0.24
CXCL12-201ENST00000343575 PAPD4Q6PIY7 484 aaKnown RBP13.57□□□□□ -0.24
CXCL12-201ENST00000343575 MFSD4AQ8N468 514 aa13.57□□□□□ -0.24
CXCL12-201ENST00000343575 OR6Q1Q8NGQ2 317 aa13.57□□□□□ -0.24
CXCL12-201ENST00000343575 METTL21AQ8WXB1 218 aa13.57□□□□□ -0.24
CXCL12-201ENST00000343575 HPS1Q92902 700 aa13.57□□□□□ -0.24
CXCL12-201ENST00000343575 BTBD2Q9BX70 525 aa13.57□□□□□ -0.24
CXCL12-201ENST00000343575 NXF5Q9H1B4 397 aaKnown RBP13.57□□□□□ -0.24
CXCL12-201ENST00000343575 ADPRHL2Q9NX46 363 aa13.57□□□□□ -0.24
CXCL12-201ENST00000343575 ABCG2Q9UNQ0 655 aa13.57□□□□□ -0.24
CXCL12-201ENST00000343575 IFT52Q9Y366 437 aa13.57□□□□□ -0.24
CXCL12-201ENST00000343575 SYNDIG1LA6NDD5 238 aa13.57□□□□□ -0.24
CXCL12-201ENST00000343575 SLC16A6O15403 523 aa13.57□□□□□ -0.24
CXCL12-201ENST00000343575 BRINP1O60477 761 aa13.57□□□□□ -0.24
CXCL12-201ENST00000343575 GFRA3O60609 400 aa13.57□□□□□ -0.24
CXCL12-201ENST00000343575 TCN2P20062 427 aa13.57□□□□□ -0.24
CXCL12-201ENST00000343575 PCMT1P22061 227 aa13.57□□□□□ -0.24
CXCL12-201ENST00000343575 OR1E2P47887 323 aa13.57□□□□□ -0.24
CXCL12-201ENST00000343575 CXCR4P61073 352 aa13.57□□□□□ -0.24
CXCL12-201ENST00000343575 RPS18P62269 152 aaKnown RBP13.57□□□□□ -0.24
CXCL12-201ENST00000343575 POU6F2P78424 691 aaPredicted RBP13.57□□□□□ -0.24
CXCL12-201ENST00000343575 MAPK14Q16539 360 aa13.57□□□□□ -0.24
CXCL12-201ENST00000343575 ZIK1Q3SY52 487 aaPredicted RBP13.57□□□□□ -0.24
CXCL12-201ENST00000343575 TMEM164Q5U3C3 297 aa13.57□□□□□ -0.24
CXCL12-201ENST00000343575 THOC7Q6I9Y2 204 aaKnown RBP13.57□□□□□ -0.24
CXCL12-201ENST00000343575 TMPRSS7Q7RTY8 843 aa13.57□□□□□ -0.24
CXCL12-201ENST00000343575 ADCK1Q86TW2 530 aa13.57□□□□□ -0.24
CXCL12-201ENST00000343575 ARMC8Q8IUR7 673 aa13.57□□□□□ -0.24
CXCL12-201ENST00000343575 SVOPQ8N4V2 548 aa13.57□□□□□ -0.24
CXCL12-201ENST00000343575 ZNF441Q8N8Z8 693 aa13.57□□□□□ -0.24
CXCL12-201ENST00000343575 B3GNT7Q8NFL0 401 aa13.57□□□□□ -0.24
CXCL12-201ENST00000343575 FBLIM1Q8WUP2 373 aa13.57□□□□□ -0.24
CXCL12-201ENST00000343575 RORBQ92753 470 aa13.57□□□□□ -0.24
CXCL12-201ENST00000343575 B3GNT4Q9C0J1 378 aa13.57□□□□□ -0.24
CXCL12-201ENST00000343575 CCNB1IP1Q9NPC3 277 aa13.57□□□□□ -0.24
CXCL12-201ENST00000343575 PRODH2Q9UF12 536 aa13.57□□□□□ -0.24
CXCL12-201ENST00000343575 TPRKBQ9Y3C4 175 aa13.57□□□□□ -0.24
CXCL12-201ENST00000343575 UGT2A1Q9Y4X1 527 aa13.57□□□□□ -0.24
CXCL12-201ENST00000343575 HS3ST3B1Q9Y662 390 aa13.57□□□□□ -0.24
CXCL12-201ENST00000343575 PCSK5Q92824 1860 aa13.56□□□□□ -0.24
CXCL12-201ENST00000343575 CDRT15L2A8MXV6 281 aa13.56□□□□□ -0.24
CXCL12-201ENST00000343575 SLC1A7O00341 560 aa13.56□□□□□ -0.24
CXCL12-201ENST00000343575 DYRK3O43781 588 aa13.56□□□□□ -0.24
CXCL12-201ENST00000343575 SEMA7AO75326 666 aa13.56□□□□□ -0.24
CXCL12-201ENST00000343575 HTR1AP08908 422 aa13.56□□□□□ -0.24
CXCL12-201ENST00000343575 CCNYL3P0C7X3 344 aa13.56□□□□□ -0.24
CXCL12-201ENST00000343575 TRHRP34981 398 aaPredicted RBP13.56□□□□□ -0.24
CXCL12-201ENST00000343575 PIGAP37287 484 aa13.56□□□□□ -0.24
CXCL12-201ENST00000343575 PPICP45877 212 aa13.56□□□□□ -0.24
CXCL12-201ENST00000343575 PPP5CP53041 499 aa13.56□□□□□ -0.24
CXCL12-201ENST00000343575 GABREP78334 506 aa13.56□□□□□ -0.24
CXCL12-201ENST00000343575 PPP2R2BQ00005 443 aa13.56□□□□□ -0.24
CXCL12-201ENST00000343575 GNA13Q14344 377 aa13.56□□□□□ -0.24
CXCL12-201ENST00000343575 PCOLCEQ15113 449 aa13.56□□□□□ -0.24
CXCL12-201ENST00000343575 KCNJ8Q15842 424 aa13.56□□□□□ -0.24
CXCL12-201ENST00000343575 VRK2Q86Y07 508 aa13.56□□□□□ -0.24
CXCL12-201ENST00000343575 ZDHHC21Q8IVQ6 265 aa13.56□□□□□ -0.24
CXCL12-201ENST00000343575 OR4D11Q8NGI4 311 aa13.56□□□□□ -0.24
CXCL12-201ENST00000343575 CHAC2Q8WUX2 184 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms