RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 HCAR2Q8TDS4 363 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 RAB8BQ92930 207 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 DUS3LQ96G46 650 aaKnown RBP5.85□□□□□ -1.47
VCAN-203ENST00000343200 HBEGFQ99075 208 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 NICN1Q9BSH3 213 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 SERINC1Q9NRX5 453 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 ACOXLQ9NUZ1 547 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 RAI2Q9Y5P3 530 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 ETV7Q9Y603 341 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 PTPN13Q12923 2485 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 ZNF106Q9H2Y7 1883 aaKnown RBP5.85□□□□□ -1.47
VCAN-203ENST00000343200 MEGF11A6BM72 1044 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 A8MU76 341 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 CTRB1P17538 263 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 WNT3AP56704 352 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 HNRNPKP61978 463 aaKnown RBP eCLIP5.85□□□□□ -1.47
VCAN-203ENST00000343200 CDK6Q00534 326 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 TAP2Q03519 686 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 ARSJQ5FYB0 599 aaPredicted RBP5.85□□□□□ -1.47
VCAN-203ENST00000343200 FRG2Q64ET8 278 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 CTRB2Q6GPI1 263 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 ENPP6Q6UWR7 440 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 HACD2Q6Y1H2 254 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 ABHD12BQ7Z5M8 362 aaPredicted RBP5.85□□□□□ -1.47
VCAN-203ENST00000343200 TPRA1Q86W33 373 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 C7orf57Q8NEG2 295 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 HAS1Q92839 578 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 PGLYRP2Q96PD5 576 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 FRG2BQ96QU4 278 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 MTIF3Q9H2K0 278 aaKnown RBP5.85□□□□□ -1.47
VCAN-203ENST00000343200 AGO4Q9HCK5 861 aaKnown RBP5.85□□□□□ -1.47
VCAN-203ENST00000343200 CENPMQ9NSP4 180 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 TNFSF12O43508 249 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 PRDX3P30048 256 aaKnown RBP5.85□□□□□ -1.47
VCAN-203ENST00000343200 SGSHP51688 502 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 MRPL49Q13405 166 aaKnown RBP5.85□□□□□ -1.47
VCAN-203ENST00000343200 STRADAQ7RTN6 431 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 TMEM145Q8NBT3 493 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 OR1J1Q8NGS3 322 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 GPR119Q8TDV5 335 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 ATG101Q9BSB4 218 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 SLCO5A1Q9H2Y9 848 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 UTS2RQ9UKP6 389 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 FABP7O15540 132 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 CACNG3O60359 315 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 SLC43A1O75387 559 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 STC2O76061 302 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 POMCP01189 267 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 CTSHP09668 335 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 ARL16Q0P5N6 197 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 TBCEQ15813 527 aaPredicted RBP5.85□□□□□ -1.47
VCAN-203ENST00000343200 GRIK5Q16478 980 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 SLX4IPQ5VYV7 408 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 SFRP4Q6FHJ7 346 aaPredicted RBP5.85□□□□□ -1.47
VCAN-203ENST00000343200 SLC8B1Q6J4K2 584 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 IRF2BP2Q7Z5L9 587 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 DEFB106AQ8N104 65 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 OR13D1Q8NGV5 346 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 CCNL2Q96S94 520 aaPredicted RBP5.85□□□□□ -1.47
VCAN-203ENST00000343200 ZNF587Q96SQ5 575 aaPredicted RBP5.85□□□□□ -1.47
VCAN-203ENST00000343200 HDHD5Q9BXW7 423 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 MYOZ2Q9NPC6 264 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 ABI3Q9P2A4 366 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 NUMBLQ9Y6R0 609 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 PTPRAP18433 802 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 EPHA1P21709 976 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 THPOP40225 353 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 CXCR4P61073 352 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 RAB11AP62491 216 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 ZNF763Q0D2J5 394 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 CCINQ13939 588 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 DECR1Q16698 335 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 LCN8Q6JVE9 175 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 Q6ZN92 141 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 LRRTM1Q86UE6 522 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 XYLT1Q86Y38 959 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 ZNF440Q8IYI8 595 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 ARNTL2Q8WYA1 636 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 ADGRG7Q96K78 797 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 AK3Q9UIJ7 227 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.84□□□□□ -1.47
VCAN-203ENST00000343200 XKRY2A2RUG3 117 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 NDUFS4O43181 175 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 OR2F2O95006 317 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 GABRR2P28476 465 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 AMTP48728 403 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 PPP2CAP67775 309 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 OR2F1Q13607 317 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 ENDOGQ14249 297 aaKnown RBP5.84□□□□□ -1.47
VCAN-203ENST00000343200 CLINT1Q14677 625 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 SBSNQ6UWP8 590 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 IL34Q6ZMJ4 242 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 SERPINA9Q86WD7 417 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 TMEM139Q8IV31 216 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 GLB1L2Q8IW92 636 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 PRMT6Q96LA8 375 aaPredicted RBP5.84□□□□□ -1.47
VCAN-203ENST00000343200 FAAP24Q9BTP7 215 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 SORBS1Q9BX66 1292 aaKnown RBP5.84□□□□□ -1.47
VCAN-203ENST00000343200 PDGFDQ9GZP0 370 aaPredicted RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms