RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 MMP21Q8N119 569 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 ZNF619Q8N2I2 560 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 Q8N9G6 341 aaPredicted RBP6.74□□□□□ -1.33
VCAN-202ENST00000342785 SDR9C7Q8NEX9 313 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 OR2L3Q8NG85 312 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 HAVCR1Q96D42 359 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 TMEM41AQ96HV5 264 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 POTEKPQ9BYX7 375 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 PPIL3Q9H2H8 161 aaKnown RBP6.74□□□□□ -1.33
VCAN-202ENST00000342785 RNF167Q9H6Y7 350 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 DIMT1Q9UNQ2 313 aaKnown RBP6.74□□□□□ -1.33
VCAN-202ENST00000342785 OR51B4Q9Y5P0 310 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 A0A0X1KG70 313 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 FBXO45P0C2W1 286 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 GTF2F2P13984 249 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 PGAM2P15259 253 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 RBM34P42696 430 aaKnown RBP6.74□□□□□ -1.33
VCAN-202ENST00000342785 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.74□□□□□ -1.331e-7■■■■□ 23
VCAN-202ENST00000342785 PLK5Q496M5 336 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 TCTN3Q6NUS6 607 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 TMEFF1Q8IYR6 380 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 OR4K17Q8NGC6 315 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 CASTOR1Q8WTX7 329 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 TMEM234Q8WY98 164 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 ZDHHC12Q96GR4 267 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 MSLNLQ96KJ4 702 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 CMKLR1Q99788 373 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 GTPBP2Q9BX10 602 aaKnown RBP6.74□□□□□ -1.33
VCAN-202ENST00000342785 RANBP3Q9H6Z4 567 aaPredicted RBP6.74□□□□□ -1.33
VCAN-202ENST00000342785 SAGE1Q9NXZ1 904 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 TAAR2Q9P1P5 351 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 NAALAD2Q9Y3Q0 740 aa6.74□□□□□ -1.33
VCAN-202ENST00000342785 TRAV27A0A087WT01 109 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 SGK494L7N484 410 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 TMPRSS11DO60235 418 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 HPGDSO60760 199 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 MTFR2Q6P444 385 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 ADAMTSL4Q6UY14 1074 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 FAM83FQ8NEG4 500 aaPredicted RBP6.73□□□□□ -1.33
VCAN-202ENST00000342785 DYNC2LI1Q8TCX1 351 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 THAP3Q8WTV1 239 aaPredicted RBP6.73□□□□□ -1.33
VCAN-202ENST00000342785 TANKQ92844 425 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 THAP7Q9BT49 309 aaPredicted RBP6.73□□□□□ -1.33
VCAN-202ENST00000342785 DPCDQ9BVM2 203 aaPredicted RBP6.73□□□□□ -1.33
VCAN-202ENST00000342785 STARD5Q9NSY2 213 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 TMEFF2Q9UIK5 374 aaPredicted RBP6.73□□□□□ -1.33
VCAN-202ENST00000342785 SCML1Q9UN30 329 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 SH2B3Q9UQQ2 575 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 OR2AT4A6NND4 320 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 PRRT4C9JH25 899 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 PLGP00747 810 aaPredicted RBP6.73□□□□□ -1.33
VCAN-202ENST00000342785 MAS1P04201 325 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 PGCP20142 388 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 TGFBR1P36897 503 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 RPS19P39019 145 aaKnown RBP6.73□□□□□ -1.33
VCAN-202ENST00000342785 ART1P52961 327 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 RPS25P62851 125 aaKnown RBP6.73□□□□□ -1.33
VCAN-202ENST00000342785 SF3A2Q15428 464 aaKnown RBP6.73□□□□□ -1.33
VCAN-202ENST00000342785 LTB4RQ15722 352 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 TATDN3Q17R31 274 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 LRRN1Q6UXK5 716 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 BAIAP2L2Q6UXY1 529 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 Q6ZSR6 202 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 TECPR1Q7Z6L1 1165 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 LAS2Q8IYD9 372 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 CLDN22Q8N7P3 220 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 VN1R2Q8NFZ6 395 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 DEDD2Q8WXF8 326 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 ZNF582Q96NG8 517 aaPredicted RBP6.73□□□□□ -1.33
VCAN-202ENST00000342785 GAS2L1Q99501 681 aaPredicted RBP6.73□□□□□ -1.33
VCAN-202ENST00000342785 PRRG4Q9BZD6 226 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 TPSD1Q9BZJ3 242 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 CST11Q9H112 138 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 A4GALTQ9NPC4 353 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 FARSAQ9Y285 508 aaKnown RBP6.73□□□□□ -1.33
VCAN-202ENST00000342785 ASB4Q9Y574 426 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 CABIN1Q9Y6J0 2220 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 COL4A5P29400 1685 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 A0A1B0GVI7 797 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 H0YGG7 62 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 PROS1P07225 676 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 ARF3P61204 181 aaPredicted RBP6.73□□□□□ -1.33
VCAN-202ENST00000342785 TBC1D25Q3MII6 688 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 SLC22A10Q63ZE4 541 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 MEPCEQ7L2J0 689 aaKnown RBP6.73□□□□□ -1.33
VCAN-202ENST00000342785 CELF2-AS1Q8N7Q2 184 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 GABARAPL1Q9H0R8 117 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 SLC6A15Q9H2J7 730 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 CD93Q9NPY3 652 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 ECM29Q5VYK3 1845 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 PRSS38A1L453 326 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 PRAMEF2O60811 474 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 CD160O95971 181 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 CXCL10P02778 98 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 IGFBP1P08833 259 aaPredicted RBP6.73□□□□□ -1.33
VCAN-202ENST00000342785 HSD11B1P28845 292 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 HTR2BP41595 481 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 OR1Q1Q15612 314 aa6.73□□□□□ -1.33
VCAN-202ENST00000342785 MRPL2Q5T653 305 aaKnown RBP6.73□□□□□ -1.33
VCAN-202ENST00000342785 CALHM3Q86XJ0 350 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms