RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 RNF166Q96A37 237 aaPredicted RBP9.42□□□□□ -0.9
TPM3-207ENST00000341372 SPACA9Q96E40 222 aaPredicted RBP9.42□□□□□ -0.9
TPM3-207ENST00000341372 ZNF845Q96IR2 970 aaPredicted RBP9.42□□□□□ -0.9
TPM3-207ENST00000341372 TSSK3Q96PN8 268 aa9.42□□□□□ -0.9
TPM3-207ENST00000341372 GAL3ST4Q96RP7 486 aa9.42□□□□□ -0.9
TPM3-207ENST00000341372 REEP4Q9H6H4 257 aa9.42□□□□□ -0.9
TPM3-207ENST00000341372 ATP6V1HQ9UI12 483 aa9.42□□□□□ -0.9
TPM3-207ENST00000341372 DTX4Q9Y2E6 619 aa9.42□□□□□ -0.9
TPM3-207ENST00000341372 ATP6AP2A0A1C7CYW4 349 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 SHISA8B8ZZ34 492 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 PEX11AO75192 247 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 ATP6AP2O75787 350 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 TSPAN9O75954 239 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 PSMG1O95456 288 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 MST1P26927 711 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 NTSP30990 170 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 MRPS35P82673 323 aaKnown RBP9.41□□□□□ -0.9
TPM3-207ENST00000341372 MAD2L1Q13257 205 aaPredicted RBP9.41□□□□□ -0.9
TPM3-207ENST00000341372 EXOSC7Q15024 291 aaKnown RBP9.41□□□□□ -0.9
TPM3-207ENST00000341372 NTRK2Q16620 822 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 IL20RBQ6UXL0 311 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 TAGAPQ8N103 731 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 ZFP62Q8NB50 900 aaPredicted RBP9.41□□□□□ -0.9
TPM3-207ENST00000341372 OR52R1Q8NGF1 315 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 LRRC8CQ8TDW0 803 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 PAQR8Q8TEZ7 354 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 THOC1Q96FV9 657 aaKnown RBP9.41□□□□□ -0.9
TPM3-207ENST00000341372 AMDHD1Q96NU7 426 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 BTBD9Q96Q07 612 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 BBS4Q96RK4 519 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 SOX7Q9BT81 388 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 GLIPR2Q9H4G4 154 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 MEAF6Q9HAF1 191 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 HEYLQ9NQ87 328 aaPredicted RBP9.41□□□□□ -0.9
TPM3-207ENST00000341372 DEPPQ9NTK1 212 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 PRODH2Q9UF12 536 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 ERVK-11Q9UQG0 969 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 DTNAQ9Y4J8 743 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 ANKUB1A6NFN9 424 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 KLRC4-KLRK1H3BQV0 150 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 SCAMP2O15127 329 aaKnown RBP9.41□□□□□ -0.9
TPM3-207ENST00000341372 TO15178 435 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 RPL3P39023 403 aaKnown RBP9.41□□□□□ -0.9
TPM3-207ENST00000341372 NR0B1P51843 470 aaKnown RBP9.41□□□□□ -0.9
TPM3-207ENST00000341372 NCBP2P52298 156 aaKnown RBP eCLIP9.41□□□□□ -0.9
TPM3-207ENST00000341372 EMX2Q04743 252 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 MRPL49Q13405 166 aaKnown RBP9.41□□□□□ -0.9
TPM3-207ENST00000341372 RAB32Q13637 225 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 FAM69AQ5T7M9 428 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 HLA-DQA1Q5Y7H0 255 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 BTN2A1Q7KYR7 527 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 SPATA21Q7Z572 469 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 OR2L13Q8N349 312 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 LIX1Q8N485 282 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 CPSF7Q8N684 471 aaKnown RBP9.41□□□□□ -0.9
TPM3-207ENST00000341372 FNDC5Q8NAU1 212 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 CCDC197Q8NCU1 140 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 OR7G2Q8NG99 324 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 PPCDCQ96CD2 204 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 TUBGCP3Q96CW5 907 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 NTNG2Q96CW9 530 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 VSTM2LQ96N03 204 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 NXF5Q9H1B4 397 aaKnown RBP9.41□□□□□ -0.9
TPM3-207ENST00000341372 LDAHQ9H6V9 325 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 ACSS1Q9NUB1 689 aaPredicted RBP9.41□□□□□ -0.9
TPM3-207ENST00000341372 DECR2Q9NUI1 292 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 BAIAP2L1Q9UHR4 511 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 CHCHD2Q9Y6H1 151 aaPredicted RBP9.41□□□□□ -0.9
TPM3-207ENST00000341372 PTPN13Q12923 2485 aa9.41□□□□□ -0.9
TPM3-207ENST00000341372 FRG2CA6NGY1 282 aa9.4□□□□□ -0.9
TPM3-207ENST00000341372 ACOX3O15254 700 aa9.4□□□□□ -0.9
TPM3-207ENST00000341372 PEX1O43933 1283 aa9.4□□□□□ -0.9
TPM3-207ENST00000341372 CCL3P10147 92 aa9.4□□□□□ -0.9
TPM3-207ENST00000341372 NAGAP17050 411 aa9.4□□□□□ -0.9
TPM3-207ENST00000341372 DRD5P21918 477 aa9.4□□□□□ -0.9
TPM3-207ENST00000341372 PPICP45877 212 aa9.4□□□□□ -0.9
TPM3-207ENST00000341372 TMED10P49755 219 aaKnown RBP9.4□□□□□ -0.9
TPM3-207ENST00000341372 MEOX1P50221 254 aa9.4□□□□□ -0.9
TPM3-207ENST00000341372 PSPHP78330 225 aa9.4□□□□□ -0.9
TPM3-207ENST00000341372 SRSF1Q07955 248 aaKnown RBP eCLIP9.4□□□□□ -0.92e-7■□□□□ 8.7
TPM3-207ENST00000341372 PTGR1Q14914 329 aa9.4□□□□□ -0.9
TPM3-207ENST00000341372 IL23RQ5VWK5 629 aa9.4□□□□□ -0.9
TPM3-207ENST00000341372 OGFOD2Q6N063 350 aa9.4□□□□□ -0.9
TPM3-207ENST00000341372 CAMKMTQ7Z624 323 aa9.4□□□□□ -0.9
TPM3-207ENST00000341372 RIMKLAQ8IXN7 391 aa9.4□□□□□ -0.9
TPM3-207ENST00000341372 FBXW8Q8N3Y1 598 aa9.4□□□□□ -0.9
TPM3-207ENST00000341372 CLHC1Q8NHS4 586 aa9.4□□□□□ -0.9
TPM3-207ENST00000341372 RFWD2Q8NHY2 731 aa9.4□□□□□ -0.9
TPM3-207ENST00000341372 C10orf82Q8WW14 230 aa9.4□□□□□ -0.9
TPM3-207ENST00000341372 KAT2AQ92830 837 aa9.4□□□□□ -0.9
TPM3-207ENST00000341372 GFM2Q969S9 779 aaKnown RBP9.4□□□□□ -0.9
TPM3-207ENST00000341372 C3orf49Q96BT1 292 aa9.4□□□□□ -0.9
TPM3-207ENST00000341372 SECISBP2Q96T21 854 aaKnown RBP9.4□□□□□ -0.9
TPM3-207ENST00000341372 C1orf50Q9BV19 199 aa9.4□□□□□ -0.9
TPM3-207ENST00000341372 AKTIPQ9H8T0 292 aa9.4□□□□□ -0.9
TPM3-207ENST00000341372 NOP53Q9NZM5 478 aaKnown RBP9.4□□□□□ -0.9
TPM3-207ENST00000341372 NTMQ9P121 344 aa9.4□□□□□ -0.9
TPM3-207ENST00000341372 BCAP29Q9UHQ4 241 aa9.4□□□□□ -0.9
TPM3-207ENST00000341372 PRDM4Q9UKN5 801 aa9.4□□□□□ -0.9
TPM3-207ENST00000341372 DOPEY1Q5JWR5 2465 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms