RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 MR1Q95460 341 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 TSLPQ969D9 159 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 SNX18Q96RF0 628 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 CIB1Q99828 191 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 CNPPD1Q9BV87 410 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 NMNAT1Q9HAN9 279 aaPredicted RBP6.61□□□□□ -1.35
NUP43-201ENST00000340413 CCNB1IP1Q9NPC3 277 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 CNIH4Q9P003 139 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 YARS2Q9Y2Z4 477 aaKnown RBP6.61□□□□□ -1.35
NUP43-201ENST00000340413 CHST2Q9Y4C5 530 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 STMND1H3BQB6 276 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 TP53I11O14683 189 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 SERPINA7P05543 415 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 FTH1P19P0C7X4 201 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 MYF5P13349 255 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 IL12BP29460 328 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 GANABQ14697 944 aaKnown RBP6.61□□□□□ -1.35
NUP43-201ENST00000340413 UGT2A3Q6UWM9 527 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 LYPD8Q6UX82 237 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 SLC38A9Q8NBW4 561 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 PIGXQ8TBF5 258 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 BRIX1Q8TDN6 353 aaKnown RBP6.61□□□□□ -1.35
NUP43-201ENST00000340413 MBOAT4Q96T53 435 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 TEX12Q9BXU0 123 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 SH2D2AQ9NP31 389 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 FAM118AQ9NWS6 357 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 OR10H1Q9Y4A9 318 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 MAU2Q9Y6X3 613 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 NPIPB13A6NJU9 1138 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 NPIPB4C9JG80 1138 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 CNOT3O75175 753 aaKnown RBP6.6□□□□□ -1.35
NUP43-201ENST00000340413 UTS2O95399 124 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 TSPAN19P0C672 248 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 ADH6P28332 368 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 GRK5P34947 590 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 CAPZA2P47755 286 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 SNRPGP62308 76 aaKnown RBP6.6□□□□□ -1.35
NUP43-201ENST00000340413 SKP2Q13309 424 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 PDK3Q15120 406 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 MINDY4Q4G0A6 757 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 STK32CQ86UX6 486 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 DTX1Q86Y01 620 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 ADPRHL1Q8NDY3 354 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 STK35Q8TDR2 534 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 IPCEF1Q8WWN9 437 aaPredicted RBP6.6□□□□□ -1.35
NUP43-201ENST00000340413 SLC41A3Q96GZ6 507 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 SLC29A1Q99808 456 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 UCK2Q9BZX2 261 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 KRT84Q9NSB2 600 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 MAN2C1Q9NTJ4 1040 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 PDP1Q9P0J1 537 aaPredicted RBP6.6□□□□□ -1.35
NUP43-201ENST00000340413 DKK4Q9UBT3 224 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 TCFL5Q9UL49 500 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 ARPC4-TTLL3A0A0A6YYG9 625 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 GXYLT2A0PJZ3 443 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 ANKUB1A6NFN9 424 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 C9orf172C9J069 976 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 LINC01387J3KSC0 135 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 RAD1O60671 282 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 PIPP12273 146 aaPredicted RBP6.6□□□□□ -1.35
NUP43-201ENST00000340413 GGT2P36268 569 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 DAPP51397 102 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 PLCXD2Q0VAA5 305 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 DNASE1L3Q13609 305 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 ZNF239Q16600 458 aaKnown RBP6.6□□□□□ -1.35
NUP43-201ENST00000340413 EXOC3L2Q2M3D2 409 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 VWA2Q5GFL6 755 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 MRPL2Q5T653 305 aaKnown RBP6.6□□□□□ -1.35
NUP43-201ENST00000340413 MEDAGQ5VYS4 303 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 SLX4IPQ5VYV7 408 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 SZRD1Q7Z422 152 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 THAP5Q7Z6K1 395 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 ALDH16A1Q8IZ83 802 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 CPAMD8Q8IZJ3 1885 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 C8orf59Q8N0T1 100 aaPredicted RBP6.6□□□□□ -1.35
NUP43-201ENST00000340413 ADAMTS17Q8TE56 1095 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 CT55Q8WUE5 264 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 OMA1Q96E52 524 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 RMND5BQ96G75 393 aaPredicted RBP6.6□□□□□ -1.35
NUP43-201ENST00000340413 SGCZQ96LD1 299 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 MCHR1Q99705 422 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 MRPS26Q9BYN8 205 aaKnown RBP6.6□□□□□ -1.35
NUP43-201ENST00000340413 ADAM19Q9H013 955 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 KIF17Q9P2E2 1029 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 ZNF223Q9UK11 482 aaPredicted RBP6.6□□□□□ -1.35
NUP43-201ENST00000340413 SAC3D1A6NKF1 404 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 ZAR1LA6NP61 321 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 FFAR1O14842 300 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 ZNF264O43296 627 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 IDH3BO43837 385 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 IGKV1D-16P01601 117 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 C1QCP02747 245 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 CYP4B1P13584 511 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 APEHP13798 732 aaKnown RBP6.6□□□□□ -1.35
NUP43-201ENST00000340413 PGCP20142 388 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 TTKP33981 857 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 ACAA2P42765 397 aaKnown RBP6.6□□□□□ -1.35
NUP43-201ENST00000340413 TAS2R41P59536 307 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 MFSD13AQ14CX5 517 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 LPAL2Q16609 132 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms