RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 ZBTB8AQ96BR9 441 aa13.97□□□□□ -0.17
LINC01116-202ENST00000339037 CCDC126Q96EE4 140 aa13.97□□□□□ -0.17
LINC01116-202ENST00000339037 ADGRG7Q96K78 797 aa13.97□□□□□ -0.17
LINC01116-202ENST00000339037 TMEM204Q9BSN7 226 aa13.97□□□□□ -0.17
LINC01116-202ENST00000339037 TMEM185BQ9H7F4 350 aa13.97□□□□□ -0.17
LINC01116-202ENST00000339037 PRR14LQ5THK1 2151 aa13.97□□□□□ -0.17
LINC01116-202ENST00000339037 CUBNO60494 3623 aa13.96□□□□□ -0.17
LINC01116-202ENST00000339037 C7orf72A4D263 438 aa13.96□□□□□ -0.17
LINC01116-202ENST00000339037 TNFSF11O14788 317 aa13.96□□□□□ -0.17
LINC01116-202ENST00000339037 CXCL13O43927 109 aa13.96□□□□□ -0.17
LINC01116-202ENST00000339037 PLIN3O60664 434 aa13.96□□□□□ -0.17
LINC01116-202ENST00000339037 RSL1D1O76021 490 aaKnown RBP13.96□□□□□ -0.17
LINC01116-202ENST00000339037 OPN1LWP04000 364 aa13.96□□□□□ -0.17
LINC01116-202ENST00000339037 TUBBP07437 444 aa13.96□□□□□ -0.17
LINC01116-202ENST00000339037 NGFRP08138 427 aa13.96□□□□□ -0.17
LINC01116-202ENST00000339037 NID1P14543 1247 aa13.96□□□□□ -0.17
LINC01116-202ENST00000339037 PSMB1P20618 241 aaKnown RBP13.96□□□□□ -0.17
LINC01116-202ENST00000339037 GPC1P35052 558 aa13.96□□□□□ -0.17
LINC01116-202ENST00000339037 ZNF41P51814 821 aaPredicted RBP13.96□□□□□ -0.17
LINC01116-202ENST00000339037 RPS4XP62701 263 aaKnown RBP13.96□□□□□ -0.17
LINC01116-202ENST00000339037 RAC1P63000 192 aa13.96□□□□□ -0.17
LINC01116-202ENST00000339037 TNK1Q13470 666 aa13.96□□□□□ -0.17
LINC01116-202ENST00000339037 ALKBH2Q6NS38 261 aa13.96□□□□□ -0.17
LINC01116-202ENST00000339037 NOXRED1Q6NXP6 359 aa13.96□□□□□ -0.17
LINC01116-202ENST00000339037 ZNF551Q7Z340 670 aaPredicted RBP13.96□□□□□ -0.17
LINC01116-202ENST00000339037 TRIM46Q7Z4K8 759 aa13.96□□□□□ -0.17
LINC01116-202ENST00000339037 GALNT10Q86SR1 603 aa13.96□□□□□ -0.17
LINC01116-202ENST00000339037 EXOC3L1Q86VI1 746 aa13.96□□□□□ -0.17
LINC01116-202ENST00000339037 OR4C3Q8NH37 302 aa13.96□□□□□ -0.17
LINC01116-202ENST00000339037 OR2V1Q8NHB1 315 aa13.96□□□□□ -0.17
LINC01116-202ENST00000339037 AKAP1Q92667 903 aaKnown RBP eCLIP13.96□□□□□ -0.17
LINC01116-202ENST00000339037 RNF145Q96MT1 663 aa13.96□□□□□ -0.17
LINC01116-202ENST00000339037 OR10A4Q9H209 315 aa13.96□□□□□ -0.17
LINC01116-202ENST00000339037 C12orf49Q9H741 205 aa13.96□□□□□ -0.17
LINC01116-202ENST00000339037 LAMP3Q9UQV4 416 aa13.96□□□□□ -0.17
LINC01116-202ENST00000339037 GPR52Q9Y2T5 361 aa13.96□□□□□ -0.17
LINC01116-202ENST00000339037 A0A1W2PRB8 838 aa13.95□□□□□ -0.18
LINC01116-202ENST00000339037 PDPK1O15530 556 aa13.95□□□□□ -0.18
LINC01116-202ENST00000339037 CRLF1O75462 422 aa13.95□□□□□ -0.18
LINC01116-202ENST00000339037 CRCPO75575 148 aa13.95□□□□□ -0.18
LINC01116-202ENST00000339037 NKX2-2O95096 273 aa13.95□□□□□ -0.18
LINC01116-202ENST00000339037 OXSR1O95747 527 aaPredicted RBP13.95□□□□□ -0.18
LINC01116-202ENST00000339037 PRPS2P11908 318 aa13.95□□□□□ -0.18
LINC01116-202ENST00000339037 AGTR1P30556 359 aa13.95□□□□□ -0.18
LINC01116-202ENST00000339037 SLC18A2Q05940 514 aa13.95□□□□□ -0.18
LINC01116-202ENST00000339037 ZNF844Q08AG5 666 aa13.95□□□□□ -0.18
LINC01116-202ENST00000339037 VEZF1Q14119 521 aa13.95□□□□□ -0.18
LINC01116-202ENST00000339037 CAPRIN1Q14444 709 aaKnown RBP13.95□□□□□ -0.18
LINC01116-202ENST00000339037 ETFDHQ16134 617 aa13.95□□□□□ -0.18
LINC01116-202ENST00000339037 PLPPR5Q32ZL2 321 aa13.95□□□□□ -0.18
LINC01116-202ENST00000339037 CCDC153Q494R4 210 aa13.95□□□□□ -0.18
LINC01116-202ENST00000339037 CPTPQ5TA50 214 aa13.95□□□□□ -0.18
LINC01116-202ENST00000339037 HBMQ6B0K9 141 aa13.95□□□□□ -0.18
LINC01116-202ENST00000339037 SZRD1Q7Z422 152 aa13.95□□□□□ -0.18
LINC01116-202ENST00000339037 CNPY4Q8N129 248 aa13.95□□□□□ -0.18
LINC01116-202ENST00000339037 EIF1ADQ8N9N8 165 aaKnown RBP13.95□□□□□ -0.18
LINC01116-202ENST00000339037 CDRT4Q8N9R6 151 aa13.95□□□□□ -0.18
LINC01116-202ENST00000339037 GATSQ8NAP1 163 aa13.95□□□□□ -0.18
LINC01116-202ENST00000339037 STEAP2Q8NFT2 490 aa13.95□□□□□ -0.18
LINC01116-202ENST00000339037 ACTRT2Q8TDY3 377 aa13.95□□□□□ -0.18
LINC01116-202ENST00000339037 HOXB13Q92826 284 aaPredicted RBP13.95□□□□□ -0.18
LINC01116-202ENST00000339037 NPAS1Q99742 590 aa13.95□□□□□ -0.18
LINC01116-202ENST00000339037 TACO1Q9BSH4 297 aaKnown RBP13.95□□□□□ -0.18
LINC01116-202ENST00000339037 RRAGDQ9NQL2 400 aaPredicted RBP13.95□□□□□ -0.18
LINC01116-202ENST00000339037 MED17Q9NVC6 651 aa13.95□□□□□ -0.18
LINC01116-202ENST00000339037 OXSMQ9NWU1 459 aa13.95□□□□□ -0.18
LINC01116-202ENST00000339037 ABCA1O95477 2261 aa13.95□□□□□ -0.18
LINC01116-202ENST00000339037 NUP214P35658 2090 aaPredicted RBP13.95□□□□□ -0.18
LINC01116-202ENST00000339037 NBEAL1Q6ZS30 2694 aa13.94□□□□□ -0.18
LINC01116-202ENST00000339037 PABPC4LP0CB38 370 aaKnown RBP13.94□□□□□ -0.18
LINC01116-202ENST00000339037 HPGDP15428 266 aa13.94□□□□□ -0.18
LINC01116-202ENST00000339037 PSMA4P25789 261 aaKnown RBP13.94□□□□□ -0.18
LINC01116-202ENST00000339037 CRHR1P34998 444 aa13.94□□□□□ -0.18
LINC01116-202ENST00000339037 MAP3K8P41279 467 aa13.94□□□□□ -0.18
LINC01116-202ENST00000339037 PRKAG1P54619 331 aa13.94□□□□□ -0.18
LINC01116-202ENST00000339037 DNAJB13P59910 316 aa13.94□□□□□ -0.18
LINC01116-202ENST00000339037 KRTAP1-1Q07627 177 aa13.94□□□□□ -0.18
LINC01116-202ENST00000339037 DMTNQ08495 405 aa13.94□□□□□ -0.18
LINC01116-202ENST00000339037 CLEC12BQ2HXU8 276 aa13.94□□□□□ -0.18
LINC01116-202ENST00000339037 PDSS1Q5T2R2 415 aa13.94□□□□□ -0.18
LINC01116-202ENST00000339037 CLEC6AQ6EIG7 209 aa13.94□□□□□ -0.18
LINC01116-202ENST00000339037 GTF2IRD2BQ6EKJ0 949 aa13.94□□□□□ -0.18
LINC01116-202ENST00000339037 ANKRD26P1Q6NSI1 321 aa13.94□□□□□ -0.18
LINC01116-202ENST00000339037 GTF2IRD2Q86UP8 949 aa13.94□□□□□ -0.18
LINC01116-202ENST00000339037 TDRPQ86YL5 185 aa13.94□□□□□ -0.18
LINC01116-202ENST00000339037 C4orf33Q8N1A6 199 aa13.94□□□□□ -0.18
LINC01116-202ENST00000339037 CEP70Q8NHQ1 597 aa13.94□□□□□ -0.18
LINC01116-202ENST00000339037 FBXO30Q8TB52 745 aa13.94□□□□□ -0.18
LINC01116-202ENST00000339037 RAB3IL1Q8TBN0 382 aa13.94□□□□□ -0.18
LINC01116-202ENST00000339037 S100PBPQ96BU1 408 aa13.94□□□□□ -0.18
LINC01116-202ENST00000339037 TRIM44Q96DX7 344 aaPredicted RBP13.94□□□□□ -0.18
LINC01116-202ENST00000339037 SH3YL1Q96HL8 342 aaPredicted RBP13.94□□□□□ -0.18
LINC01116-202ENST00000339037 REXO5Q96IC2 774 aaKnown RBP13.94□□□□□ -0.18
LINC01116-202ENST00000339037 EGLN2Q96KS0 407 aa13.94□□□□□ -0.18
LINC01116-202ENST00000339037 IQCGQ9H095 443 aaKnown RBP13.94□□□□□ -0.18
LINC01116-202ENST00000339037 RNF115Q9Y4L5 304 aa13.94□□□□□ -0.18
LINC01116-202ENST00000339037 PTGDR2Q9Y5Y4 395 aa13.94□□□□□ -0.18
LINC01116-202ENST00000339037 A0A0J9YW62 118 aa13.93□□□□□ -0.18
LINC01116-202ENST00000339037 H3BQF6 201 aa13.93□□□□□ -0.18
LINC01116-202ENST00000339037 COPEO14579 308 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms