RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 DOC2AQ14183 400 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 TCEAL1Q15170 157 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 STEAP4Q687X5 459 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 CREB3L2Q70SY1 520 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 SIAH1Q8IUQ4 282 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 SULF2Q8IWU5 870 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 SKA3Q8IX90 412 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 ZNF75AQ96N20 296 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 DCBLD2Q96PD2 775 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 DDX31Q9H8H2 851 aaKnown RBP9.27□□□□□ -0.93
COL4A6-201ENST00000334504 MINDY3Q9H8M7 445 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 CRTAC1Q9NQ79 661 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 MARCH4Q9P2E8 410 aaPredicted RBP9.27□□□□□ -0.93
COL4A6-201ENST00000334504 V9GY05 133 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 SURF4O15260 269 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 GAB1Q13480 694 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 GPM6BQ13491 265 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 KIAA0141Q14154 515 aaPredicted RBP9.27□□□□□ -0.93
COL4A6-201ENST00000334504 FAM213BQ8TBF2 198 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 ADAMTS16Q8TE57 1224 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 CLEC4DQ8WXI8 215 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 SCLYQ96I15 445 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 C4orf36Q96KX1 117 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 SPATA6Q9NWH7 488 aaPredicted RBP9.27□□□□□ -0.93
COL4A6-201ENST00000334504 TP53TG5Q9Y2B4 290 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 WASH4PA8MWX3 477 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 IL1AP01583 271 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 FUCA1P04066 466 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 TP53P04637 393 aaPredicted RBP9.27□□□□□ -0.93
COL4A6-201ENST00000334504 RAB3AP20336 220 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 TBPL1P62380 186 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 RACK1P63244 317 aaKnown RBP9.27□□□□□ -0.93
COL4A6-201ENST00000334504 SQSTM1Q13501 440 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 FCN2Q15485 313 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 ASPGQ86U10 573 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 HUS1BQ8NHY5 278 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 GPR148Q8TDV2 347 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 OR1F2PQ96R84 312 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 PKMYT1Q99640 499 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 NIPAL2Q9H841 368 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 STYXL1Q9Y6J8 313 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 ADGRB2O60241 1585 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 A0A0D9SEW6 157 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 SYNGR4O95473 234 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 TAS2R38P59533 333 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 ERVPABLB-1P60509 514 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 MRPS34P82930 218 aaKnown RBP9.26□□□□□ -0.93
COL4A6-201ENST00000334504 RAB30Q15771 203 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 OR4C11Q6IEV9 310 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 FAM180BQ6P0A1 224 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 RNF111Q6ZNA4 994 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 FAM122BQ7Z309 247 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 OR4M1Q8NGD0 313 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 RPL3LQ92901 407 aaKnown RBP9.26□□□□□ -0.93
COL4A6-201ENST00000334504 IGSF5Q9NSI5 407 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 TDP1Q9NUW8 608 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 PCDHA9Q9Y5H5 950 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 IQGAP1P46940 1657 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 MTMR11A4FU01 709 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 ANKRD28O15084 1053 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 C8AP07357 584 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 GABRR1P24046 479 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 TAGLN2P37802 199 aaKnown RBP9.26□□□□□ -0.93
COL4A6-201ENST00000334504 HTR6P50406 440 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 ERVK-16P61578 105 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 FLI1Q01543 452 aaPredicted RBP9.26□□□□□ -0.93
COL4A6-201ENST00000334504 RAB40BQ12829 278 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 PIN1Q13526 163 aaPredicted RBP9.26□□□□□ -0.93
COL4A6-201ENST00000334504 IER5LQ5T953 404 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 FAM58AQ8N1B3 248 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 OR56B4Q8NH76 319 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 RAB39BQ96DA2 213 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 DAZAP1Q96EP5 407 aaKnown RBP9.26□□□□□ -0.93
COL4A6-201ENST00000334504 APIPQ96GX9 242 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 SENP5Q96HI0 755 aaPredicted RBP9.26□□□□□ -0.93
COL4A6-201ENST00000334504 FAM71F1Q96KD3 344 aaPredicted RBP9.26□□□□□ -0.93
COL4A6-201ENST00000334504 KCNK13Q9HB14 408 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 DCAF13Q9NV06 445 aaKnown RBP9.26□□□□□ -0.93
COL4A6-201ENST00000334504 SLC22A23A1A5C7 686 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 GABRPO00591 440 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 TSPAN6O43657 245 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 FZD7O75084 574 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 TYRP1P17643 537 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 NPY5RQ15761 445 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 C22orf39Q6P5X5 142 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 OR7G3Q8NG95 312 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 MMABQ96EY8 250 aaPredicted RBP9.26□□□□□ -0.93
COL4A6-201ENST00000334504 NPY6RQ99463 290 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 USB1Q9BQ65 265 aaKnown RBP9.26□□□□□ -0.93
COL4A6-201ENST00000334504 FAM212BQ9NTI7 297 aaPredicted RBP9.26□□□□□ -0.93
COL4A6-201ENST00000334504 ABRACLQ9P1F3 81 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 SH3BGRL2Q9UJC5 107 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 TCRBV3S1A0A5B6 114 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 RTCAO00442 366 aaKnown RBP9.26□□□□□ -0.93
COL4A6-201ENST00000334504 P2RX6O15547 441 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 ADAM12O43184 909 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 PEX10O60683 326 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 JMJD7P0C870 316 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 TAS2R30P59541 319 aa9.26□□□□□ -0.93
COL4A6-201ENST00000334504 LTBQ06643 244 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms