RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 PDZK1Q5T2W1 519 aa14.83□□□□□ -0.03
TUBB3-201ENST00000315491 IRAK1BP1Q5VVH5 260 aa14.83□□□□□ -0.03
TUBB3-201ENST00000315491 LYPD8Q6UX82 237 aa14.83□□□□□ -0.03
TUBB3-201ENST00000315491 ZNF836Q6ZNA1 936 aa14.83□□□□□ -0.03
TUBB3-201ENST00000315491 TMEM102Q8N9M5 508 aaPredicted RBP14.83□□□□□ -0.03
TUBB3-201ENST00000315491 CLEC1AQ8NC01 280 aa14.83□□□□□ -0.03
TUBB3-201ENST00000315491 PAPD5Q8NDF8 572 aaKnown RBP14.83□□□□□ -0.03
TUBB3-201ENST00000315491 OR4C3Q8NH37 302 aa14.83□□□□□ -0.03
TUBB3-201ENST00000315491 BRIX1Q8TDN6 353 aaKnown RBP14.83□□□□□ -0.03
TUBB3-201ENST00000315491 PROX1Q92786 737 aa14.83□□□□□ -0.03
TUBB3-201ENST00000315491 ZNF354BQ96LW1 612 aa14.83□□□□□ -0.03
TUBB3-201ENST00000315491 CCNL2Q96S94 520 aaPredicted RBP14.83□□□□□ -0.03
TUBB3-201ENST00000315491 CCDC86Q9H6F5 360 aaKnown RBP14.83□□□□□ -0.03
TUBB3-201ENST00000315491 ZBTB20Q9HC78 741 aaPredicted RBP14.83□□□□□ -0.03
TUBB3-201ENST00000315491 UBQLN4Q9NRR5 601 aa14.83□□□□□ -0.03
TUBB3-201ENST00000315491 ARMC1Q9NVT9 282 aa14.83□□□□□ -0.03
TUBB3-201ENST00000315491 FLRT3Q9NZU0 649 aa14.83□□□□□ -0.03
TUBB3-201ENST00000315491 DKK4Q9UBT3 224 aa14.83□□□□□ -0.03
TUBB3-201ENST00000315491 YARS2Q9Y2Z4 477 aaKnown RBP14.83□□□□□ -0.03
TUBB3-201ENST00000315491 ARGFXA6NJG6 315 aa14.83□□□□□ -0.04
TUBB3-201ENST00000315491 ABCB7O75027 752 aa14.83□□□□□ -0.04
TUBB3-201ENST00000315491 UGT2B11O75310 529 aa14.83□□□□□ -0.04
TUBB3-201ENST00000315491 NID1P14543 1247 aa14.83□□□□□ -0.04
TUBB3-201ENST00000315491 HOXB6P17509 224 aaKnown RBP14.83□□□□□ -0.04
TUBB3-201ENST00000315491 TMED10P49755 219 aaKnown RBP14.83□□□□□ -0.04
TUBB3-201ENST00000315491 RRADP55042 308 aa14.83□□□□□ -0.04
TUBB3-201ENST00000315491 CDC20Q12834 499 aa14.83□□□□□ -0.04
TUBB3-201ENST00000315491 EFR3AQ14156 821 aa14.83□□□□□ -0.04
TUBB3-201ENST00000315491 DESI1Q6ICB0 168 aa14.83□□□□□ -0.04
TUBB3-201ENST00000315491 SIRT6Q8N6T7 355 aa14.83□□□□□ -0.04
TUBB3-201ENST00000315491 ZNF614Q8N883 585 aa14.83□□□□□ -0.04
TUBB3-201ENST00000315491 OIT3Q8WWZ8 545 aa14.83□□□□□ -0.04
TUBB3-201ENST00000315491 GEMIN6Q8WXD5 167 aaKnown RBP14.83□□□□□ -0.04
TUBB3-201ENST00000315491 CHID1Q9BWS9 393 aa14.83□□□□□ -0.04
TUBB3-201ENST00000315491 RYDENQ9NUL5 291 aaKnown RBP14.83□□□□□ -0.04
TUBB3-201ENST00000315491 RIMS3Q9UJD0 308 aa14.83□□□□□ -0.04
TUBB3-201ENST00000315491 SLC13A4Q9UKG4 626 aa14.83□□□□□ -0.04
TUBB3-201ENST00000315491 CLDN24A6NM45 220 aa14.82□□□□□ -0.04
TUBB3-201ENST00000315491 H3BSA7 217 aa14.82□□□□□ -0.04
TUBB3-201ENST00000315491 SYT5O00445 386 aa14.82□□□□□ -0.04
TUBB3-201ENST00000315491 MAGEB3O15480 346 aa14.82□□□□□ -0.04
TUBB3-201ENST00000315491 ICOSLGO75144 302 aa14.82□□□□□ -0.04
TUBB3-201ENST00000315491 OXSR1O95747 527 aaPredicted RBP14.82□□□□□ -0.04
TUBB3-201ENST00000315491 EPPINO95925 133 aa14.82□□□□□ -0.04
TUBB3-201ENST00000315491 LGI1O95970 557 aa14.82□□□□□ -0.04
TUBB3-201ENST00000315491 FBXO45P0C2W1 286 aa14.82□□□□□ -0.04
TUBB3-201ENST00000315491 ATP6V1B1P15313 513 aa14.82□□□□□ -0.04
TUBB3-201ENST00000315491 TNFRSF1BP20333 461 aa14.82□□□□□ -0.04
TUBB3-201ENST00000315491 ITGA3P26006 1051 aa14.82□□□□□ -0.04
TUBB3-201ENST00000315491 EEF1A1P68104 462 aaKnown RBP14.82□□□□□ -0.04
TUBB3-201ENST00000315491 CCDC92Q53HC0 331 aaPredicted RBP14.82□□□□□ -0.04
TUBB3-201ENST00000315491 B3GNTL1Q67FW5 361 aaPredicted RBP14.82□□□□□ -0.04
TUBB3-201ENST00000315491 COMTD1Q86VU5 262 aa14.82□□□□□ -0.04
TUBB3-201ENST00000315491 PSMF1Q92530 271 aa14.82□□□□□ -0.04
TUBB3-201ENST00000315491 LHPPQ9H008 270 aa14.82□□□□□ -0.04
TUBB3-201ENST00000315491 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.82□□□□□ -0.04
TUBB3-201ENST00000315491 POLHQ9Y253 713 aa14.82□□□□□ -0.04
TUBB3-201ENST00000315491 CHST2Q9Y4C5 530 aa14.82□□□□□ -0.04
TUBB3-201ENST00000315491 SCDO00767 359 aa14.81□□□□□ -0.04
TUBB3-201ENST00000315491 EFSO43281 561 aa14.81□□□□□ -0.04
TUBB3-201ENST00000315491 E2F6O75461 281 aa14.81□□□□□ -0.04
TUBB3-201ENST00000315491 MT-ND1P03886 318 aa14.81□□□□□ -0.04
TUBB3-201ENST00000315491 HPGDP15428 266 aa14.81□□□□□ -0.04
TUBB3-201ENST00000315491 TBXA2RP21731 343 aa14.81□□□□□ -0.04
TUBB3-201ENST00000315491 SOX3P41225 446 aa14.81□□□□□ -0.04
TUBB3-201ENST00000315491 OR1E2P47887 323 aa14.81□□□□□ -0.04
TUBB3-201ENST00000315491 RNF144AP50876 292 aaPredicted RBP14.81□□□□□ -0.04
TUBB3-201ENST00000315491 SSR4P51571 173 aa14.81□□□□□ -0.04
TUBB3-201ENST00000315491 FBXW4P57775 412 aa14.81□□□□□ -0.04
TUBB3-201ENST00000315491 FGFBP1Q14512 234 aa14.81□□□□□ -0.04
TUBB3-201ENST00000315491 MEP1AQ16819 746 aa14.81□□□□□ -0.04
TUBB3-201ENST00000315491 KLHL26Q53HC5 615 aa14.81□□□□□ -0.04
TUBB3-201ENST00000315491 EIPR1Q53HC9 387 aa14.81□□□□□ -0.04
TUBB3-201ENST00000315491 OPN5Q6U736 354 aa14.81□□□□□ -0.04
TUBB3-201ENST00000315491 NUP54Q7Z3B4 507 aa14.81□□□□□ -0.04
TUBB3-201ENST00000315491 CLIP4Q8N3C7 705 aa14.81□□□□□ -0.04
TUBB3-201ENST00000315491 ZNF527Q8NB42 609 aa14.81□□□□□ -0.04
TUBB3-201ENST00000315491 APOBEC4Q8WW27 367 aaKnown RBP14.81□□□□□ -0.04
TUBB3-201ENST00000315491 ASB15Q8WXK1 588 aa14.81□□□□□ -0.04
TUBB3-201ENST00000315491 HGDQ93099 445 aa14.81□□□□□ -0.04
TUBB3-201ENST00000315491 ITPKCQ96DU7 683 aa14.81□□□□□ -0.04
TUBB3-201ENST00000315491 SPACA9Q96E40 222 aaPredicted RBP14.81□□□□□ -0.04
TUBB3-201ENST00000315491 IL1RAPQ9NPH3 570 aa14.81□□□□□ -0.04
TUBB3-201ENST00000315491 INIPQ9NRY2 104 aa14.81□□□□□ -0.04
TUBB3-201ENST00000315491 KLHL28Q9NXS3 571 aa14.81□□□□□ -0.04
TUBB3-201ENST00000315491 SERINC4A6NH21 518 aa14.8□□□□□ -0.04
TUBB3-201ENST00000315491 ZNF701M0R085 212 aaPredicted RBP14.8□□□□□ -0.04
TUBB3-201ENST00000315491 TIPRLO75663 272 aa14.8□□□□□ -0.04
TUBB3-201ENST00000315491 FABP3P05413 133 aa14.8□□□□□ -0.04
TUBB3-201ENST00000315491 NGFRP08138 427 aa14.8□□□□□ -0.04
TUBB3-201ENST00000315491 HOXD11P31277 338 aaPredicted RBP14.8□□□□□ -0.04
TUBB3-201ENST00000315491 MAGEA2P43356 314 aa14.8□□□□□ -0.04
TUBB3-201ENST00000315491 TUBA4AP68366 448 aa14.8□□□□□ -0.04
TUBB3-201ENST00000315491 VLDLRP98155 873 aa14.8□□□□□ -0.04
TUBB3-201ENST00000315491 KCNC4Q03721 635 aa14.8□□□□□ -0.04
TUBB3-201ENST00000315491 NTRK2Q16620 822 aa14.8□□□□□ -0.04
TUBB3-201ENST00000315491 ACER2Q5QJU3 275 aa14.8□□□□□ -0.04
TUBB3-201ENST00000315491 MRPL2Q5T653 305 aaKnown RBP14.8□□□□□ -0.04
TUBB3-201ENST00000315491 CARM1Q86X55 608 aa14.8□□□□□ -0.04
TUBB3-201ENST00000315491 ZDHHC21Q8IVQ6 265 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms