RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 ARHGAP33O14559 1287 aa12.94□□□□□ -0.34
SPAST-201ENST00000315285 HPGDSO60760 199 aa12.94□□□□□ -0.34
SPAST-201ENST00000315285 SEC14L2O76054 403 aa12.94□□□□□ -0.34
SPAST-201ENST00000315285 FARS2O95363 451 aaKnown RBP12.94□□□□□ -0.34
SPAST-201ENST00000315285 PNMTP11086 282 aa12.94□□□□□ -0.34
SPAST-201ENST00000315285 PTH2RP49190 550 aa12.94□□□□□ -0.34
SPAST-201ENST00000315285 HNRNPKP61978 463 aaKnown RBP eCLIP12.94□□□□□ -0.34
SPAST-201ENST00000315285 GALK2Q01415 458 aa12.94□□□□□ -0.34
SPAST-201ENST00000315285 BCL7AQ4VC05 210 aa12.94□□□□□ -0.34
SPAST-201ENST00000315285 CHPT1Q8WUD6 406 aa12.94□□□□□ -0.34
SPAST-201ENST00000315285 PGAM5Q96HS1 289 aa12.94□□□□□ -0.34
SPAST-201ENST00000315285 DHRS1Q96LJ7 313 aa12.94□□□□□ -0.34
SPAST-201ENST00000315285 CXXC1Q9P0U4 656 aaPredicted RBP12.94□□□□□ -0.34
SPAST-201ENST00000315285 DNMT3BQ9UBC3 853 aaKnown RBP12.94□□□□□ -0.34
SPAST-201ENST00000315285 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.94□□□□□ -0.34
SPAST-201ENST00000315285 M0R036 132 aa12.94□□□□□ -0.34
SPAST-201ENST00000315285 PTHP01270 115 aa12.94□□□□□ -0.34
SPAST-201ENST00000315285 ARRB2P32121 409 aa12.94□□□□□ -0.34
SPAST-201ENST00000315285 ZNF84P51523 738 aa12.94□□□□□ -0.34
SPAST-201ENST00000315285 CTBP2P56545 445 aa12.94□□□□□ -0.34
SPAST-201ENST00000315285 COL28A1Q2UY09 1125 aa12.94□□□□□ -0.34
SPAST-201ENST00000315285 INAVAQ3KP66 663 aa12.94□□□□□ -0.34
SPAST-201ENST00000315285 CCSAPQ6IQ19 270 aaPredicted RBP12.94□□□□□ -0.34
SPAST-201ENST00000315285 TBPL2Q6SJ96 375 aa12.94□□□□□ -0.34
SPAST-201ENST00000315285 PLXDC1Q8IUK5 500 aa12.94□□□□□ -0.34
SPAST-201ENST00000315285 TMEM151BQ8IW70 566 aa12.94□□□□□ -0.34
SPAST-201ENST00000315285 KLHL15Q96M94 604 aa12.94□□□□□ -0.34
SPAST-201ENST00000315285 AIFM2Q9BRQ8 373 aa12.94□□□□□ -0.34
SPAST-201ENST00000315285 BABAM2Q9NXR7 383 aa12.94□□□□□ -0.34
SPAST-201ENST00000315285 ASIC5Q9NY37 505 aa12.94□□□□□ -0.34
SPAST-201ENST00000315285 ZNF443Q9Y2A4 671 aaPredicted RBP12.94□□□□□ -0.34
SPAST-201ENST00000315285 SFTPBP07988 381 aa12.94□□□□□ -0.34
SPAST-201ENST00000315285 TSPAN31Q12999 210 aa12.94□□□□□ -0.34
SPAST-201ENST00000315285 ENTHD1Q8IYW4 607 aa12.94□□□□□ -0.34
SPAST-201ENST00000315285 OR5L2Q8NGL0 311 aa12.94□□□□□ -0.34
SPAST-201ENST00000315285 TOX2Q96NM4 488 aa12.94□□□□□ -0.34
SPAST-201ENST00000315285 INSM2Q96T92 566 aaPredicted RBP12.94□□□□□ -0.34
SPAST-201ENST00000315285 EGLN3Q9H6Z9 239 aa12.94□□□□□ -0.34
SPAST-201ENST00000315285 KCNIP3Q9Y2W7 256 aa12.94□□□□□ -0.34
SPAST-201ENST00000315285 A0A1B0GVC2 190 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 AIFM1O95831 613 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 AMY2AP04746 511 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 GYPBP06028 91 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 AGTR1P30556 359 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 CHRNEQ04844 493 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 FGFBP1Q14512 234 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 EXOSC7Q15024 291 aaKnown RBP12.93□□□□□ -0.34
SPAST-201ENST00000315285 CST9Q5W186 159 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 Q6ZSR6 202 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 RTN4RL1Q86UN2 441 aaPredicted RBP12.93□□□□□ -0.34
SPAST-201ENST00000315285 OR1F2PQ96R84 312 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 LMF1Q96S06 567 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 TPSD1Q9BZJ3 242 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 KATNBL1Q9H079 304 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 SYNPO2LQ9H987 977 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 MEPEQ9NQ76 525 aaPredicted RBP12.93□□□□□ -0.34
SPAST-201ENST00000315285 NAALAD2Q9Y3Q0 740 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 HSPA12AO43301 675 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 CAPZA1P52907 286 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 PFN3P60673 137 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 UBE2UQ5VVX9 321 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 C4orf36Q96KX1 117 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 NECTIN4Q96NY8 510 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 ZNF304Q9HCX3 659 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 STARD5Q9NSY2 213 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 TRAV27A0A087WT01 109 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 SLCO2B1O94956 709 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 AMY2BP19961 511 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 VEGFBP49765 207 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 HNRNPFP52597 415 aaKnown RBP12.93□□□□□ -0.34
SPAST-201ENST00000315285 NKX3-2P78367 333 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 COX20Q5RI15 118 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 MEPCEQ7L2J0 689 aaKnown RBP12.93□□□□□ -0.34
SPAST-201ENST00000315285 P4HA3Q7Z4N8 544 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 GALNT11Q8NCW6 608 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 CXorf36Q9H7Y0 433 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 RASD1Q9Y272 281 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 KLK4Q9Y5K2 254 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 ABLIM3O94929 683 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 GABARAPO95166 117 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 ZNF806P0C7X5 589 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 CPMP14384 443 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 MMP12P39900 470 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 HSD11B2P80365 405 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 CTBSQ01459 385 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 FGL1Q08830 312 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 NLGN4XQ8N0W4 816 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 OR52R1Q8NGF1 315 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 NUDT8Q8WV74 236 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 C7orf34Q96L11 122 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 UHRF1Q96T88 793 aaPredicted RBP12.93□□□□□ -0.34
SPAST-201ENST00000315285 PITX2Q99697 317 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 OR2S2Q9NQN1 319 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 C2orf42Q9NWW7 574 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 TEX10Q9NXF1 929 aaPredicted RBP12.93□□□□□ -0.34
SPAST-201ENST00000315285 NUBP2Q9Y5Y2 271 aa12.93□□□□□ -0.34
SPAST-201ENST00000315285 PRSS38A1L453 326 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 CENPBD1B2RD01 187 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 C17orf105B2RV13 164 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 MAN2B1O00754 1011 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms