RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 HOXC4P09017 264 aaPredicted RBP12.76□□□□□ -0.37
DDX54-202ENST00000314045 MYF5P13349 255 aa12.76□□□□□ -0.37
DDX54-202ENST00000314045 PDX1P52945 283 aa12.76□□□□□ -0.37
DDX54-202ENST00000314045 ACTC1P68032 377 aa12.76□□□□□ -0.37
DDX54-202ENST00000314045 ACTA1P68133 377 aa12.76□□□□□ -0.37
DDX54-202ENST00000314045 SCN1BQ07699 218 aa12.76□□□□□ -0.37
DDX54-202ENST00000314045 KCTD18Q6PI47 426 aaPredicted RBP12.76□□□□□ -0.37
DDX54-202ENST00000314045 NEK7Q8TDX7 302 aa12.76□□□□□ -0.37
DDX54-202ENST00000314045 SLC46A1Q96NT5 459 aa12.76□□□□□ -0.37
DDX54-202ENST00000314045 RNF121Q9H920 327 aa12.76□□□□□ -0.37
DDX54-202ENST00000314045 B3GAT2Q9NPZ5 323 aa12.76□□□□□ -0.37
DDX54-202ENST00000314045 NKIRAS2Q9NYR9 191 aa12.76□□□□□ -0.37
DDX54-202ENST00000314045 ZNF879B4DU55 563 aa12.76□□□□□ -0.37
DDX54-202ENST00000314045 OR2T1O43869 369 aa12.76□□□□□ -0.37
DDX54-202ENST00000314045 SFTPDP35247 375 aa12.76□□□□□ -0.37
DDX54-202ENST00000314045 MFSD13AQ14CX5 517 aa12.76□□□□□ -0.37
DDX54-202ENST00000314045 UGT2A3Q6UWM9 527 aa12.76□□□□□ -0.37
DDX54-202ENST00000314045 SHFQ7M4L6 423 aa12.76□□□□□ -0.37
DDX54-202ENST00000314045 ADGRF3Q8IZF5 1079 aa12.76□□□□□ -0.37
DDX54-202ENST00000314045 NLGN4XQ8N0W4 816 aa12.76□□□□□ -0.37
DDX54-202ENST00000314045 OR6T1Q8NGN1 323 aa12.76□□□□□ -0.37
DDX54-202ENST00000314045 OR2T4Q8NH00 348 aa12.76□□□□□ -0.37
DDX54-202ENST00000314045 THAP4Q8WY91 577 aa12.76□□□□□ -0.37
DDX54-202ENST00000314045 NDUFAF4Q9P032 175 aa12.76□□□□□ -0.37
DDX54-202ENST00000314045 PADI1Q9ULC6 663 aa12.76□□□□□ -0.37
DDX54-202ENST00000314045 CDH10Q9Y6N8 788 aa12.76□□□□□ -0.37
DDX54-202ENST00000314045 A6NCN8 305 aa12.75□□□□□ -0.37
DDX54-202ENST00000314045 SYT5O00445 386 aa12.75□□□□□ -0.37
DDX54-202ENST00000314045 PLOD3O60568 738 aa12.75□□□□□ -0.37
DDX54-202ENST00000314045 TMBIM6P55061 237 aa12.75□□□□□ -0.37
DDX54-202ENST00000314045 CLRN1P58418 232 aa12.75□□□□□ -0.37
DDX54-202ENST00000314045 KIAA0040Q15053 153 aa12.75□□□□□ -0.37
DDX54-202ENST00000314045 DUSP5Q16690 384 aa12.75□□□□□ -0.37
DDX54-202ENST00000314045 LCORQ96JN0 433 aaPredicted RBP12.75□□□□□ -0.37
DDX54-202ENST00000314045 SAP130Q9H0E3 1048 aa12.75□□□□□ -0.37
DDX54-202ENST00000314045 ZNF385DQ9H6B1 395 aa12.75□□□□□ -0.37
DDX54-202ENST00000314045 SNX11Q9Y5W9 270 aa12.75□□□□□ -0.37
DDX54-202ENST00000314045 ST14Q9Y5Y6 855 aa12.75□□□□□ -0.37
DDX54-202ENST00000314045 TMEM14AQ9Y6G1 99 aa12.75□□□□□ -0.37
DDX54-202ENST00000314045 SLC35F4A4IF30 521 aa12.75□□□□□ -0.37
DDX54-202ENST00000314045 FCARP24071 287 aa12.75□□□□□ -0.37
DDX54-202ENST00000314045 APOFQ13790 326 aa12.75□□□□□ -0.37
DDX54-202ENST00000314045 SMAD2Q15796 467 aaKnown RBP12.75□□□□□ -0.37
DDX54-202ENST00000314045 ZNF404Q494X3 552 aa12.75□□□□□ -0.37
DDX54-202ENST00000314045 Q6ZPB1 254 aaPredicted RBP12.75□□□□□ -0.37
DDX54-202ENST00000314045 DGLUCYQ7Z3D6 616 aa12.75□□□□□ -0.37
DDX54-202ENST00000314045 HDDC2Q7Z4H3 204 aa12.75□□□□□ -0.37
DDX54-202ENST00000314045 ZNF578Q96N58 590 aaPredicted RBP12.75□□□□□ -0.37
DDX54-202ENST00000314045 LMF2Q9BU23 707 aaKnown RBP12.75□□□□□ -0.37
DDX54-202ENST00000314045 C19orf53Q9UNZ5 99 aaPredicted RBP12.75□□□□□ -0.37
DDX54-202ENST00000314045 IER3IP1Q9Y5U9 82 aa12.75□□□□□ -0.37
DDX54-202ENST00000314045 LILRA5A6NI73 299 aa12.75□□□□□ -0.37
DDX54-202ENST00000314045 ZNF264O43296 627 aa12.75□□□□□ -0.37
DDX54-202ENST00000314045 RUNX2Q13950 521 aa12.75□□□□□ -0.37
DDX54-202ENST00000314045 LEG1Q6P5S2 330 aa12.75□□□□□ -0.37
DDX54-202ENST00000314045 LGALS12Q96DT0 336 aa12.75□□□□□ -0.37
DDX54-202ENST00000314045 OR52D1Q9H346 318 aa12.75□□□□□ -0.37
DDX54-202ENST00000314045 TESQ9UGI8 421 aaKnown RBP12.75□□□□□ -0.37
DDX54-202ENST00000314045 RPH3AQ9Y2J0 694 aaPredicted RBP12.75□□□□□ -0.37
DDX54-202ENST00000314045 CACNA1EQ15878 2313 aa12.75□□□□□ -0.37
DDX54-202ENST00000314045 A0A1W2PPL8 197 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 HCRTR1O43613 425 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 ENTPD6O75354 484 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 SYNGR4O95473 234 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 BMP1P13497 986 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 ZNF20P17024 532 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 PRPS1P60891 318 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 ALG10Q5BKT4 473 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 OPN5Q6U736 354 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 GPBAR1Q8TDU6 330 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 OLAHQ9NV23 265 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 PAIP2BQ9ULR5 123 aaKnown RBP12.74□□□□□ -0.37
DDX54-202ENST00000314045 ASXL3Q9C0F0 2248 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 CARD17Q5XLA6 110 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 SAXO2Q658L1 398 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 FCRLBQ6BAA4 426 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 IL20RBQ6UXL0 311 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 MED25Q71SY5 747 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 TMPRSS9Q7Z410 1059 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 KLBQ86Z14 1044 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 GPALPP1Q8IXQ4 340 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 OR14L1PQ8NHC6 308 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 GATAD2BQ8WXI9 593 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 OMA1Q96E52 524 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 CNRIP1Q96F85 164 aaPredicted RBP12.74□□□□□ -0.37
DDX54-202ENST00000314045 OR2A14Q96R47 310 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 BARD1Q99728 777 aaKnown RBP12.74□□□□□ -0.37
DDX54-202ENST00000314045 PRR14Q9BWN1 585 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 NRSN2Q9GZP1 204 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 DUSP22Q9NRW4 184 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 KCNE1BA0A087WTH5 132 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 SERINC4A6NH21 518 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 SLC15A1P46059 708 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 SOX2P48431 317 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 DAPP51397 102 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 PER3P56645 1201 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 TLE3Q04726 772 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 PDE7AQ13946 482 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 SGCAQ16586 387 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 CWF19L1Q69YN2 538 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms