RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 GVINP1Q7Z2Y8 2422 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 OR6C76A6NM76 312 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 RAB36O95755 333 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 APOC1P02654 83 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 FUT1P19526 365 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 TNFRSF1BP20333 461 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 TRHRP34981 398 aaPredicted RBP8.62□□□□□ -1.03
PTPRE-202ENST00000306042 TMPRSS3P57727 454 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 CHRNEQ04844 493 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 VRK2Q86Y07 508 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 GID4Q8IVV7 300 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 TMEM105Q8N8V8 129 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 CHST4Q8NCG5 386 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 OR2T4Q8NH00 348 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 UFD1Q92890 307 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 NMD3Q96D46 503 aaKnown RBP8.62□□□□□ -1.03
PTPRE-202ENST00000306042 CPNE2Q96FN4 548 aaPredicted RBP8.62□□□□□ -1.03
PTPRE-202ENST00000306042 FAM46AQ96IP4 442 aaKnown RBP8.62□□□□□ -1.03
PTPRE-202ENST00000306042 TPK1Q9H3S4 243 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 GNG8Q9UK08 70 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 TMEM14AQ9Y6G1 99 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 SCN5AQ14524 2016 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 ACOX3O15254 700 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 NDUFB2O95178 105 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 HSD17B1P14061 328 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 SIRPAP78324 504 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 HOXC5Q00444 222 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 CSRP2Q16527 193 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 MRPL2Q5T653 305 aaKnown RBP8.62□□□□□ -1.03
PTPRE-202ENST00000306042 TMEM211Q6ICI0 200 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 FTMTQ8N4E7 242 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 TMEM239Q8WW34 195 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 DNASE2BQ8WZ79 361 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 GPR78Q96P69 363 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 MROQ9BYG7 248 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 POLR2J2Q9GZM3 115 aaKnown RBP8.62□□□□□ -1.03
PTPRE-202ENST00000306042 NEU3Q9UQ49 428 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 B3GALT1Q9Y5Z6 326 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 APC2O95996 2303 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 AHCTF1Q8WYP5 2266 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 J3QLW9 94 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 UBFD1O14562 309 aaKnown RBP8.61□□□□□ -1.03
PTPRE-202ENST00000306042 LYNP07948 512 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 CKMT1AP12532 417 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 CCL4P13236 92 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 ZNF19P17023 458 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 CD22P20273 847 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 CSNK1A1P48729 337 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 NR1H2P55055 460 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 CXADRP78310 365 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 AIMP2Q13155 320 aaKnown RBP8.61□□□□□ -1.03
PTPRE-202ENST00000306042 RIPK1Q13546 671 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 UGT8Q16880 541 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 SWT1Q5T5J6 900 aaKnown RBP8.61□□□□□ -1.03
PTPRE-202ENST00000306042 MFSD12Q6NUT3 480 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 PACRGLQ8N7B6 248 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 OLIG1Q8TAK6 271 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 GTF2H4Q92759 462 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 SARAFQ96BY9 339 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 SGCZQ96LD1 299 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 TREX2Q9BQ50 279 aaPredicted RBP8.61□□□□□ -1.03
PTPRE-202ENST00000306042 TRAV17A0A0B4J275 112 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 A6NIZ1 184 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 NME4O00746 187 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 TMPRSS11DO60235 418 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 ALDOCP09972 364 aaKnown RBP8.61□□□□□ -1.03
PTPRE-202ENST00000306042 MSX1P28360 303 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 ALDH3A2P51648 485 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 OR12D2P58182 307 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 RAP1BP61224 184 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 RAP1AP62834 184 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 TRMT12Q53H54 448 aaKnown RBP8.61□□□□□ -1.03
PTPRE-202ENST00000306042 ZER1Q7Z7L7 766 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 TM9SF2Q99805 663 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 DEFB127Q9H1M4 99 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 MAGIXQ9H6Y5 334 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 CXorf36Q9H7Y0 433 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 BAIAP2Q9UQB8 552 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 HMX2A2RU54 273 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 A6NLC8 198 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 ATE1O95260 518 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 CSTBP04080 98 aaKnown RBP8.61□□□□□ -1.03
PTPRE-202ENST00000306042 HTR1AP08908 422 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 S1PR1P21453 382 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 ACVR1BP36896 505 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 CARD18P57730 90 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 NPRL3Q12980 569 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 CEACAM7Q14002 265 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 SLC10A1Q14973 349 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 PWWP2BQ6NUJ5 590 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 SLC23A3Q6PIS1 610 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 XKR5Q6UX68 686 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 CENPSQ8N2Z9 138 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 NT5CQ8TCD5 201 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 HDHD5Q9BXW7 423 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 MED11Q9P086 117 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 THSD7BQ9C0I4 1608 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 TRGV8A0A0C4DH27 118 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 ZNF208O43345 1280 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 CPOXP36551 454 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms