RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 METTL27Q8N6F8 245 aaPredicted RBP12.46□□□□□ -0.41
DDX54-201ENST00000306014 SDR9C7Q8NEX9 313 aa12.46□□□□□ -0.41
DDX54-201ENST00000306014 METTL21AQ8WXB1 218 aa12.46□□□□□ -0.41
DDX54-201ENST00000306014 BPIFA2Q96DR5 249 aa12.46□□□□□ -0.41
DDX54-201ENST00000306014 C7orf34Q96L11 122 aa12.46□□□□□ -0.41
DDX54-201ENST00000306014 C1QTNF2Q9BXJ5 285 aa12.46□□□□□ -0.41
DDX54-201ENST00000306014 SLC25A18Q9H1K4 315 aa12.46□□□□□ -0.41
DDX54-201ENST00000306014 PIGUQ9H490 435 aa12.46□□□□□ -0.41
DDX54-201ENST00000306014 FBXL3Q9UKT7 428 aa12.46□□□□□ -0.41
DDX54-201ENST00000306014 PLEKHA6Q9Y2H5 1048 aa12.46□□□□□ -0.41
DDX54-201ENST00000306014 C11orf98E9PRG8 122 aa12.46□□□□□ -0.42
DDX54-201ENST00000306014 APOC3P02656 99 aa12.46□□□□□ -0.42
DDX54-201ENST00000306014 HOXA9P31269 272 aa12.46□□□□□ -0.42
DDX54-201ENST00000306014 PSMB10P40306 273 aa12.46□□□□□ -0.42
DDX54-201ENST00000306014 CDK3Q00526 305 aa12.46□□□□□ -0.42
DDX54-201ENST00000306014 PRDX1Q06830 199 aaKnown RBP12.46□□□□□ -0.42
DDX54-201ENST00000306014 CST6Q15828 149 aa12.46□□□□□ -0.42
DDX54-201ENST00000306014 TCTN3Q6NUS6 607 aa12.46□□□□□ -0.42
DDX54-201ENST00000306014 FAM109AQ8N4B1 249 aa12.46□□□□□ -0.42
DDX54-201ENST00000306014 HMGB4Q8WW32 186 aa12.46□□□□□ -0.42
DDX54-201ENST00000306014 A4GALTQ9NPC4 353 aa12.46□□□□□ -0.42
DDX54-201ENST00000306014 OR6C2Q9NZP2 312 aa12.46□□□□□ -0.42
DDX54-201ENST00000306014 SLC5A10A0PJK1 596 aa12.46□□□□□ -0.42
DDX54-201ENST00000306014 HEPACAM2A8MVW5 462 aa12.46□□□□□ -0.42
DDX54-201ENST00000306014 TMEM150CB9EJG8 249 aa12.46□□□□□ -0.42
DDX54-201ENST00000306014 SOCS6O14544 535 aa12.46□□□□□ -0.42
DDX54-201ENST00000306014 KCNK2O95069 426 aa12.46□□□□□ -0.42
DDX54-201ENST00000306014 TFP02787 698 aa12.46□□□□□ -0.42
DDX54-201ENST00000306014 S100A6P06703 90 aa12.46□□□□□ -0.42
DDX54-201ENST00000306014 UCHL1P09936 223 aa12.46□□□□□ -0.42
DDX54-201ENST00000306014 CHRNB1P11230 501 aa12.46□□□□□ -0.42
DDX54-201ENST00000306014 HOXB2P14652 356 aa12.46□□□□□ -0.42
DDX54-201ENST00000306014 ITGA3P26006 1051 aa12.46□□□□□ -0.42
DDX54-201ENST00000306014 RPS15AP62244 130 aaKnown RBP12.46□□□□□ -0.42
DDX54-201ENST00000306014 BAIAP2L2Q6UXY1 529 aa12.46□□□□□ -0.42
DDX54-201ENST00000306014 CASTOR1Q8WTX7 329 aa12.46□□□□□ -0.42
DDX54-201ENST00000306014 CLDND1Q9NY35 253 aa12.46□□□□□ -0.42
DDX54-201ENST00000306014 KLHL9Q9P2J3 617 aa12.46□□□□□ -0.42
DDX54-201ENST00000306014 CEP290O15078 2479 aa12.45□□□□□ -0.42
DDX54-201ENST00000306014 ZNF888P0CJ79 500 aaPredicted RBP12.45□□□□□ -0.42
DDX54-201ENST00000306014 MMP12P39900 470 aa12.45□□□□□ -0.42
DDX54-201ENST00000306014 GDI2P50395 445 aaKnown RBP12.45□□□□□ -0.42
DDX54-201ENST00000306014 E2F1Q01094 437 aa12.45□□□□□ -0.42
DDX54-201ENST00000306014 DECR1Q16698 335 aa12.45□□□□□ -0.42
DDX54-201ENST00000306014 SWI5Q1ZZU3 235 aa12.45□□□□□ -0.42
DDX54-201ENST00000306014 PUS10Q3MIT2 529 aaKnown RBP12.45□□□□□ -0.42
DDX54-201ENST00000306014 HENMT1Q5T8I9 393 aaKnown RBP12.45□□□□□ -0.42
DDX54-201ENST00000306014 MEPCEQ7L2J0 689 aaKnown RBP12.45□□□□□ -0.42
DDX54-201ENST00000306014 PPP1R14AQ96A00 147 aa12.45□□□□□ -0.42
DDX54-201ENST00000306014 ZNF471Q9BX82 626 aaPredicted RBP12.45□□□□□ -0.42
DDX54-201ENST00000306014 ABCG4Q9H172 646 aa12.45□□□□□ -0.42
DDX54-201ENST00000306014 PLEKHA1Q9HB21 404 aa12.45□□□□□ -0.42
DDX54-201ENST00000306014 MAFFQ9ULX9 164 aa12.45□□□□□ -0.42
DDX54-201ENST00000306014 C13orf42A0A1B0GVH6 325 aa12.45□□□□□ -0.42
DDX54-201ENST00000306014 ARPC1BO15143 372 aaKnown RBP12.45□□□□□ -0.42
DDX54-201ENST00000306014 ARPC5O15511 151 aa12.45□□□□□ -0.42
DDX54-201ENST00000306014 AIFM1O95831 613 aa12.45□□□□□ -0.42
DDX54-201ENST00000306014 EN2P19622 333 aaPredicted RBP12.45□□□□□ -0.42
DDX54-201ENST00000306014 EVI2BP34910 448 aa12.45□□□□□ -0.42
DDX54-201ENST00000306014 MLLT3P42568 568 aaPredicted RBP12.45□□□□□ -0.42
DDX54-201ENST00000306014 SMCO1Q147U7 214 aa12.45□□□□□ -0.42
DDX54-201ENST00000306014 FCN2Q15485 313 aa12.45□□□□□ -0.42
DDX54-201ENST00000306014 WDR45BQ5MNZ6 344 aa12.45□□□□□ -0.42
DDX54-201ENST00000306014 METAP1DQ6UB28 335 aaPredicted RBP12.45□□□□□ -0.42
DDX54-201ENST00000306014 LRRC56Q8IYG6 542 aaPredicted RBP12.45□□□□□ -0.42
DDX54-201ENST00000306014 OR52E1Q8NGJ3 308 aa12.45□□□□□ -0.42
DDX54-201ENST00000306014 K7ESM1 405 aa12.45□□□□□ -0.42
DDX54-201ENST00000306014 ADH1BP00325 375 aa12.45□□□□□ -0.42
DDX54-201ENST00000306014 ALDOBP05062 364 aa12.45□□□□□ -0.42
DDX54-201ENST00000306014 PIPP12273 146 aaPredicted RBP12.45□□□□□ -0.42
DDX54-201ENST00000306014 ART1P52961 327 aa12.45□□□□□ -0.42
DDX54-201ENST00000306014 ZMYND11Q15326 602 aa12.45□□□□□ -0.42
DDX54-201ENST00000306014 TANKQ92844 425 aa12.45□□□□□ -0.42
DDX54-201ENST00000306014 AMDHD1Q96NU7 426 aa12.45□□□□□ -0.42
DDX54-201ENST00000306014 ALOXE3Q9BYJ1 711 aa12.45□□□□□ -0.42
DDX54-201ENST00000306014 OR8D2Q9GZM6 311 aa12.45□□□□□ -0.42
DDX54-201ENST00000306014 MCOLN1Q9GZU1 580 aa12.45□□□□□ -0.42
DDX54-201ENST00000306014 PLSCR3Q9NRY6 295 aa12.45□□□□□ -0.42
DDX54-201ENST00000306014 RXFP3Q9NSD7 469 aa12.45□□□□□ -0.42
DDX54-201ENST00000306014 WBP1LQ9NX94 342 aa12.45□□□□□ -0.42
DDX54-201ENST00000306014 NUP50Q9UKX7 468 aa12.45□□□□□ -0.42
DDX54-201ENST00000306014 SH2B3Q9UQQ2 575 aa12.45□□□□□ -0.42
DDX54-201ENST00000306014 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.44□□□□□ -0.42
DDX54-201ENST00000306014 TRIM23P36406 574 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 OCLNQ16625 522 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 C18orf63Q68DL7 685 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 KCTD9Q7L273 389 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 NUP54Q7Z3B4 507 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 SYNPO2LQ9H987 977 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 IER3IP1Q9Y5U9 82 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 A0A1B0GVI7 797 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 RNF13O43567 381 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 FZD7O75084 574 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 LDB3O75112 727 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 TRIM3O75382 744 aaPredicted RBP12.44□□□□□ -0.42
DDX54-201ENST00000306014 ZNF432O94892 652 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 WISP3O95389 354 aaPredicted RBP12.44□□□□□ -0.42
DDX54-201ENST00000306014 BMPR1AP36894 532 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 EIF1AXP47813 144 aaKnown RBP12.44□□□□□ -0.42
DDX54-201ENST00000306014 WNT3P56703 355 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms