RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 PTPRRQ15256 657 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 NKPD1Q17RQ9 610 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 LEXMQ3ZCV2 418 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 RNF111Q6ZNA4 994 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 SERPINA12Q8IW75 414 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 C12orf45Q8N5I9 185 aaPredicted RBP12.09□□□□□ -0.47
COL3A1-201ENST00000304636 ADAMTS18Q8TE60 1221 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 WDR92Q96MX6 357 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 PRRT1Q99946 306 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 SULT4A1Q9BR01 284 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 NCR1O76036 304 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 ZNF16P17020 682 aaPredicted RBP12.09□□□□□ -0.47
COL3A1-201ENST00000304636 CAV3P56539 151 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 TSPAN31Q12999 210 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 GBX1Q14549 363 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 AWAT2Q6E213 333 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 OR5AR1Q8NGP9 310 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 CREB3L4Q8TEY5 395 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 SMARCD2Q92925 531 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 ZNF419Q96HQ0 510 aaPredicted RBP12.09□□□□□ -0.47
COL3A1-201ENST00000304636 PGAM5Q96HS1 289 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 SERINC2Q96SA4 455 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 VRK1Q99986 396 aaPredicted RBP12.09□□□□□ -0.47
COL3A1-201ENST00000304636 SERTAD3Q9UJW9 196 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 IER3IP1Q9Y5U9 82 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 OR5K4A6NMS3 321 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 AHRP35869 848 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 OR6V1Q8N148 313 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 BPIFA2Q96DR5 249 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 BMFQ96LC9 184 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 GLTPQ9NZD2 209 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 SLC7A11Q9UPY5 501 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 RCE1Q9Y256 329 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 IGLON5A6NGN9 336 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 PPP3CBP16298 524 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 SYN1P17600 705 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 MEX3DQ86XN8 651 aaKnown RBP12.09□□□□□ -0.47
COL3A1-201ENST00000304636 HORMAD2Q8N7B1 307 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 ANKLE1Q8NAG6 615 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 OR5M11Q96RB7 305 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 SGIP1Q9BQI5 828 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 SORBS1Q9BX66 1292 aaKnown RBP12.09□□□□□ -0.47
COL3A1-201ENST00000304636 YARS2Q9Y2Z4 477 aaKnown RBP12.09□□□□□ -0.47
COL3A1-201ENST00000304636 UBR2Q8IWV8 1755 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 ICMTO60725 284 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 RHOP08100 348 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 TACR1P25103 407 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 OPCMLQ14982 345 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 IRF4Q15306 451 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 EOGTQ5NDL2 527 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 PDSS1Q5T2R2 415 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 PAQR9Q6ZVX9 377 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 SVBPQ8N300 66 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 ISG20Q96AZ6 181 aaKnown RBP12.09□□□□□ -0.47
COL3A1-201ENST00000304636 EVA1AQ9H8M9 152 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 CERS4Q9HA82 394 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 EMC7Q9NPA0 242 aa12.09□□□□□ -0.47
COL3A1-201ENST00000304636 C19orf25Q9UFG5 118 aaPredicted RBP12.09□□□□□ -0.47
COL3A1-201ENST00000304636 ANKRD34BA5PLL1 514 aa12.08□□□□□ -0.48
COL3A1-201ENST00000304636 TNFRSF10AO00220 468 aa12.08□□□□□ -0.48
COL3A1-201ENST00000304636 KIAA0355O15063 1070 aa12.08□□□□□ -0.48
COL3A1-201ENST00000304636 SCO2O43819 266 aa12.08□□□□□ -0.48
COL3A1-201ENST00000304636 CSO75390 466 aaKnown RBP12.08□□□□□ -0.48
COL3A1-201ENST00000304636 AADACL4Q5VUY2 407 aa12.08□□□□□ -0.48
COL3A1-201ENST00000304636 C1orf94Q6P1W5 598 aa12.08□□□□□ -0.48
COL3A1-201ENST00000304636 APOOLQ6UXV4 268 aa12.08□□□□□ -0.48
COL3A1-201ENST00000304636 SDR9C7Q8NEX9 313 aa12.08□□□□□ -0.48
COL3A1-201ENST00000304636 SMAP2Q8WU79 429 aaPredicted RBP12.08□□□□□ -0.48
COL3A1-201ENST00000304636 SYT3Q9BQG1 590 aa12.08□□□□□ -0.48
COL3A1-201ENST00000304636 CPEB1Q9BZB8 566 aaKnown RBP12.08□□□□□ -0.48
COL3A1-201ENST00000304636 MRPS17Q9Y2R5 130 aaKnown RBP12.08□□□□□ -0.48
COL3A1-201ENST00000304636 CHD4Q14839 1912 aa12.08□□□□□ -0.48
COL3A1-201ENST00000304636 ANKRD33BA6NCL7 494 aa12.08□□□□□ -0.48
COL3A1-201ENST00000304636 TVP23AA6NH52 213 aa12.08□□□□□ -0.48
COL3A1-201ENST00000304636 FOXE1O00358 373 aaPredicted RBP12.08□□□□□ -0.48
COL3A1-201ENST00000304636 ZNF195O14628 629 aa12.08□□□□□ -0.48
COL3A1-201ENST00000304636 DIRAS3O95661 229 aa12.08□□□□□ -0.48
COL3A1-201ENST00000304636 ZNF865P0CJ78 1059 aaPredicted RBP12.08□□□□□ -0.48
COL3A1-201ENST00000304636 IDUAP35475 653 aa12.08□□□□□ -0.48
COL3A1-201ENST00000304636 MTNR1BP49286 362 aa12.08□□□□□ -0.48
COL3A1-201ENST00000304636 ARHGAP19Q14CB8 494 aa12.08□□□□□ -0.48
COL3A1-201ENST00000304636 ENTPD8Q5MY95 495 aa12.08□□□□□ -0.48
COL3A1-201ENST00000304636 RAB11FIP2Q7L804 512 aa12.08□□□□□ -0.48
COL3A1-201ENST00000304636 SLC16A9Q7RTY1 509 aa12.08□□□□□ -0.48
COL3A1-201ENST00000304636 DOK4Q8TEW6 326 aa12.08□□□□□ -0.48
COL3A1-201ENST00000304636 GAPDHSO14556 408 aaPredicted RBP12.08□□□□□ -0.48
COL3A1-201ENST00000304636 SMAD6O43541 496 aaKnown RBP12.08□□□□□ -0.48
COL3A1-201ENST00000304636 SULT1C4O75897 302 aa12.08□□□□□ -0.48
COL3A1-201ENST00000304636 ALX3O95076 343 aa12.08□□□□□ -0.48
COL3A1-201ENST00000304636 PDGFAP04085 211 aa12.08□□□□□ -0.48
COL3A1-201ENST00000304636 PNMTP11086 282 aa12.08□□□□□ -0.48
COL3A1-201ENST00000304636 FUT1P19526 365 aa12.08□□□□□ -0.48
COL3A1-201ENST00000304636 APEX1P27695 318 aaKnown RBP12.08□□□□□ -0.48
COL3A1-201ENST00000304636 SLC1A3P43003 542 aa12.08□□□□□ -0.48
COL3A1-201ENST00000304636 SGCAQ16586 387 aa12.08□□□□□ -0.48
COL3A1-201ENST00000304636 NLRP8Q86W28 1048 aa12.08□□□□□ -0.48
COL3A1-201ENST00000304636 LAS2Q8IYD9 372 aa12.08□□□□□ -0.48
COL3A1-201ENST00000304636 ACBD4Q8NC06 268 aa12.08□□□□□ -0.48
COL3A1-201ENST00000304636 SLCO4A1Q96BD0 722 aa12.08□□□□□ -0.48
COL3A1-201ENST00000304636 RPS10P5Q9NQ39 176 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms