RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 BIDP55957 195 aa13.47□□□□□ -0.25
HIPK3-201ENST00000303296 HHEXQ03014 270 aa13.47□□□□□ -0.25
HIPK3-201ENST00000303296 CTC1Q2NKJ3 1217 aa13.47□□□□□ -0.25
HIPK3-201ENST00000303296 LY6G5CQ5SRR4 150 aa13.47□□□□□ -0.25
HIPK3-201ENST00000303296 DOHHQ9BU89 302 aa13.47□□□□□ -0.25
HIPK3-201ENST00000303296 DNAJB4Q9UDY4 337 aa13.47□□□□□ -0.25
HIPK3-201ENST00000303296 K7EQM0 130 aa13.47□□□□□ -0.25
HIPK3-201ENST00000303296 USP2O75604 605 aaPredicted RBP13.47□□□□□ -0.25
HIPK3-201ENST00000303296 ALDOAP04075 364 aaKnown RBP13.47□□□□□ -0.25
HIPK3-201ENST00000303296 SLURP2P0DP57 97 aa13.47□□□□□ -0.25
HIPK3-201ENST00000303296 ZNF30P17039 623 aa13.47□□□□□ -0.25
HIPK3-201ENST00000303296 SLC9A3R2Q15599 337 aa13.47□□□□□ -0.25
HIPK3-201ENST00000303296 MSMO1Q15800 293 aa13.47□□□□□ -0.25
HIPK3-201ENST00000303296 CHDHQ8NE62 594 aaPredicted RBP13.47□□□□□ -0.25
HIPK3-201ENST00000303296 OR8J1Q8NGP2 316 aa13.47□□□□□ -0.25
HIPK3-201ENST00000303296 POLHQ9Y253 713 aa13.47□□□□□ -0.25
HIPK3-201ENST00000303296 TNFRSF1BP20333 461 aa13.47□□□□□ -0.25
HIPK3-201ENST00000303296 HLA-DMAP28067 261 aa13.47□□□□□ -0.25
HIPK3-201ENST00000303296 TRHRP34981 398 aaPredicted RBP13.47□□□□□ -0.25
HIPK3-201ENST00000303296 CLDN6P56747 220 aa13.47□□□□□ -0.25
HIPK3-201ENST00000303296 EDDM3BP56851 147 aa13.47□□□□□ -0.25
HIPK3-201ENST00000303296 TGFBR3Q03167 851 aa13.47□□□□□ -0.25
HIPK3-201ENST00000303296 MLF2Q15773 248 aaPredicted RBP13.47□□□□□ -0.25
HIPK3-201ENST00000303296 NXPE4Q6UWF7 544 aa13.47□□□□□ -0.25
HIPK3-201ENST00000303296 TMEM217Q8N7C4 229 aa13.47□□□□□ -0.25
HIPK3-201ENST00000303296 OR11L1Q8NGX0 322 aa13.47□□□□□ -0.25
HIPK3-201ENST00000303296 FAM213BQ8TBF2 198 aa13.47□□□□□ -0.25
HIPK3-201ENST00000303296 F2RL3Q96RI0 385 aa13.47□□□□□ -0.25
HIPK3-201ENST00000303296 HHATLQ9HCP6 504 aa13.47□□□□□ -0.25
HIPK3-201ENST00000303296 FAM198AQ9UFP1 575 aa13.47□□□□□ -0.25
HIPK3-201ENST00000303296 SUSD5O60279 629 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 AGFG1P52594 562 aaKnown RBP13.46□□□□□ -0.25
HIPK3-201ENST00000303296 SPHARQ15513 63 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 TPGS2Q68CL5 300 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 LARP4Q71RC2 724 aaKnown RBP eCLIP13.46□□□□□ -0.25
HIPK3-201ENST00000303296 EGFL6Q8IUX8 553 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 MKXQ8IYA7 352 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 ZNF454Q8N9F8 522 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 AKR1E2Q96JD6 320 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 UBL7Q96S82 380 aaPredicted RBP13.46□□□□□ -0.25
HIPK3-201ENST00000303296 LOC102725191A0A1B0GVB3 256 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 ANHXE9PGG2 379 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 HSD17B6O14756 317 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 F2P00734 622 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 OR8U8P0C7N1 319 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 CNN3Q15417 329 aaKnown RBP13.46□□□□□ -0.25
HIPK3-201ENST00000303296 ZNF791Q3KP31 576 aaPredicted RBP13.46□□□□□ -0.25
HIPK3-201ENST00000303296 TP53I3Q53FA7 332 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 OR5D14Q8NGL3 314 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 MIB2Q96AX9 1013 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 ZMYND19Q96E35 227 aaPredicted RBP13.46□□□□□ -0.25
HIPK3-201ENST00000303296 MMP27Q9H306 513 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 SLC39A9Q9NUM3 307 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 LRIT1Q9P2V4 623 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 A6NIN4 97 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 EFSO43281 561 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 FGF18O76093 207 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 PIGRP01833 764 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 IL1RNP18510 177 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 PSMB10P40306 273 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 ARSFP54793 590 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 MOGQ16653 247 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 PPP1R3AQ16821 1122 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 ARHGAP11BQ3KRB8 267 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 NCCRP1Q6ZVX7 275 aaPredicted RBP13.46□□□□□ -0.25
HIPK3-201ENST00000303296 TEX26Q8N6G2 289 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 OR6F1Q8NGZ6 308 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 TVP23CQ96ET8 276 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 IL17FQ96PD4 163 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 CHRDQ9H2X0 955 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 ACTL7AQ9Y615 435 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 DOK2O60496 412 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 LEFTY1O75610 366 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 HADHBP55084 474 aaKnown RBP13.46□□□□□ -0.25
HIPK3-201ENST00000303296 RPS15AP62244 130 aaKnown RBP13.46□□□□□ -0.25
HIPK3-201ENST00000303296 ZNF33BQ06732 778 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 ABHD18Q0P651 414 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 ZNF169Q14929 603 aaPredicted RBP13.46□□□□□ -0.25
HIPK3-201ENST00000303296 SYPL2Q5VXT5 272 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 DESI1Q6ICB0 168 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 GRAMD2AQ8IUY3 354 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 OR5P2Q8WZ92 322 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 GSTO2Q9H4Y5 243 aa13.46□□□□□ -0.25
HIPK3-201ENST00000303296 TCRBV7S3A2A0A539 114 aa13.46□□□□□ -0.26
HIPK3-201ENST00000303296 NTF3P20783 257 aa13.46□□□□□ -0.26
HIPK3-201ENST00000303296 MEOX1P50221 254 aa13.46□□□□□ -0.26
HIPK3-201ENST00000303296 TUSC1Q2TAM9 212 aa13.46□□□□□ -0.26
HIPK3-201ENST00000303296 C22orf39Q6P5X5 142 aa13.46□□□□□ -0.26
HIPK3-201ENST00000303296 DNAJC22Q8N4W6 341 aa13.46□□□□□ -0.26
HIPK3-201ENST00000303296 ANKRD9Q96BM1 317 aaPredicted RBP13.46□□□□□ -0.26
HIPK3-201ENST00000303296 ARSGQ96EG1 525 aa13.46□□□□□ -0.26
HIPK3-201ENST00000303296 DPH7Q9BTV6 452 aa13.46□□□□□ -0.26
HIPK3-201ENST00000303296 A0A1W2PP18 115 aa13.46□□□□□ -0.26
HIPK3-201ENST00000303296 AOC2O75106 756 aa13.46□□□□□ -0.26
HIPK3-201ENST00000303296 MAOBP27338 520 aa13.46□□□□□ -0.26
HIPK3-201ENST00000303296 CSNK1A1P48729 337 aa13.46□□□□□ -0.26
HIPK3-201ENST00000303296 DAP3P51398 398 aaKnown RBP13.46□□□□□ -0.26
HIPK3-201ENST00000303296 RPS26P11Q5JNZ5 115 aaPredicted RBP13.46□□□□□ -0.26
HIPK3-201ENST00000303296 SLC22A10Q63ZE4 541 aa13.46□□□□□ -0.26
HIPK3-201ENST00000303296 OR2M7Q8NG81 312 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms