RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 TMEM201Q5SNT2 666 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 C1orf94Q6P1W5 598 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 KLBQ86Z14 1044 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 TCTE3Q8IZS6 198 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 GHDCQ8N2G8 530 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 MS4A6EQ96DS6 147 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 TTTY10Q9BZA0 68 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 CACYBPQ9HB71 228 aaKnown RBP12.56□□□□□ -0.4
CTDP1-202ENST00000299543 PHPT1Q9NRX4 125 aaPredicted RBP12.56□□□□□ -0.4
CTDP1-202ENST00000299543 PTGFRNQ9P2B2 879 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 PLEKHB1Q9UF11 243 aaPredicted RBP12.56□□□□□ -0.4
CTDP1-202ENST00000299543 CLEC4AQ9UMR7 237 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 NPIPA5A0A0B4J1W7 369 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 NPIPA7E9PJI5 369 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 HYAL3O43820 417 aaPredicted RBP12.56□□□□□ -0.4
CTDP1-202ENST00000299543 NPIPA8P0DM63 369 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 ACP2P11117 423 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 SPTBP11277 2137 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 DRD3P35462 400 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 AHRP35869 848 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 TRIM23P36406 574 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 IFNGR2P38484 337 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 RPS5P46782 204 aaKnown RBP12.56□□□□□ -0.4
CTDP1-202ENST00000299543 SIM1P81133 766 aaPredicted RBP12.56□□□□□ -0.4
CTDP1-202ENST00000299543 PDGFRLQ15198 375 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 C2orf27AQ580R0 203 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 TMEM255BQ8WV15 326 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 C11orf49Q9H6J7 331 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 IL23AQ9NPF7 189 aa12.56□□□□□ -0.4
CTDP1-202ENST00000299543 ALPK2Q86TB3 2170 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 TBC1D3DA0A087WVF3 549 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 TBC1D3IA0A087WXS9 549 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 TBC1D3EA0A087X179 549 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 TBC1D3KA0A087X1G2 549 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 TBC1D3FA6NER0 549 aaPredicted RBP12.55□□□□□ -0.4
CTDP1-202ENST00000299543 TBC1D3LB9A6J9 549 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 UBXN7O94888 489 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 KAT7O95251 611 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 TBC1D3HP0C7X1 549 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 SLC2A2P11168 524 aaPredicted RBP12.55□□□□□ -0.4
CTDP1-202ENST00000299543 ACADMP11310 421 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 PDX1P52945 283 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 STXBP1P61764 594 aaKnown RBP12.55□□□□□ -0.4
CTDP1-202ENST00000299543 CDK5Q00535 292 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 TRAM2Q15035 370 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 P2RY14Q15391 338 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 CST6Q15828 149 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 TUSC1Q2TAM9 212 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 ENTPD8Q5MY95 495 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 FCRLBQ6BAA4 426 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 TBC1D3GQ6DHY5 549 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 TBC1D3CQ6IPX1 549 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 ABHD17CQ6PCB6 329 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 ADAMTSL4Q6UY14 1074 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 TBC1D3Q8IZP1 549 aaPredicted RBP12.55□□□□□ -0.4
CTDP1-202ENST00000299543 SAMD8Q96LT4 415 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 ADAP2Q9NPF8 381 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 ING4Q9UNL4 249 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 SOCS6O14544 535 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 DVL2O14641 736 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 GKN3PP0CG01 181 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 CPEP16870 476 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 ST3GAL3Q11203 375 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 NDUFA9Q16795 377 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 PLK5Q496M5 336 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 TANGO2Q6ICL3 276 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 CNIH2Q6PI25 160 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 KRT74Q7RTS7 529 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 ADGRD2Q7Z7M1 963 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 CPOQ8IVL8 374 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 Q8N402 240 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 BMPERQ8N8U9 685 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 NEIL3Q8TAT5 605 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 GNPDA2Q8TDQ7 276 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 SMAP2Q8WU79 429 aaPredicted RBP12.55□□□□□ -0.4
CTDP1-202ENST00000299543 MENTQ9BUN1 341 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 CFHR5Q9BXR6 569 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 GHITMQ9H3K2 345 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 SYNPO2LQ9H987 977 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 SLC6A20Q9NP91 592 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 DPP7Q9UHL4 492 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 ACAD8Q9UKU7 415 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 ACSL5Q9ULC5 683 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 CACNA1CQ13936 2221 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 ARID1BQ8NFD5 2236 aaPredicted RBP12.55□□□□□ -0.4
CTDP1-202ENST00000299543 A0A0G2JPF8 293 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 GRXCR1A8MXD5 290 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 HNRNPCL3B7ZW38 293 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 HRO43593 1189 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 IL1AP01583 271 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 LIMS3P0CW19 117 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 LIMS4P0CW20 117 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 HNRNPCL4P0DMR1 293 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 GSTM3P21266 225 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 AK4P27144 223 aaPredicted RBP12.55□□□□□ -0.4
CTDP1-202ENST00000299543 EXOSC2Q13868 293 aaKnown RBP12.55□□□□□ -0.4
CTDP1-202ENST00000299543 DEFB134Q4QY38 66 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 LRFN4Q6PJG9 635 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 C17orf107Q6ZR85 190 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 LRRC17Q8N6Y2 441 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms