RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 DMDP11532 3685 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 KIAA1549LQ6ZVL6 1849 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 WDFY3Q8IZQ1 3526 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 TRAV6A0A075B6T7 132 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 PROM1O43490 865 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 SDC3O75056 442 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 DRD2P14416 443 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 RPS19P39019 145 aaKnown RBP9.43□□□□□ -0.9
FOXN4-201ENST00000299162 GSTM5P46439 218 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 RFX2P48378 723 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 LSSP48449 732 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 SMSP52788 366 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 SCN1BQ07699 218 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 NFATC4Q14934 902 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 PRICKLE2Q7Z3G6 844 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 POP5Q969H6 163 aaKnown RBP9.43□□□□□ -0.9
FOXN4-201ENST00000299162 TRMT61AQ96FX7 289 aaKnown RBP9.43□□□□□ -0.9
FOXN4-201ENST00000299162 RIPOR3Q96MK2 946 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 WACQ9BTA9 647 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 SEMA4GQ9NTN9 838 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 MCUBQ9NWR8 336 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 MRPL39Q9NYK5 338 aaKnown RBP9.43□□□□□ -0.9
FOXN4-201ENST00000299162 ACTR10Q9NZ32 417 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 FTSJ1Q9UET6 329 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 ZNF222Q9UK12 451 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 FAM240BA0A1B0GVZ2 78 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 H0YGG7 62 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 STK25O00506 426 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 CDRT1O95170 752 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 PRG2P13727 222 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 GNSP15586 552 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 HNRNPA2B1P22626 353 aaKnown RBP9.43□□□□□ -0.9
FOXN4-201ENST00000299162 ARF3P61204 181 aaPredicted RBP9.43□□□□□ -0.9
FOXN4-201ENST00000299162 SLC46A3Q7Z3Q1 461 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 NRMQ8IXM6 262 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 TMEM52Q8NDY8 209 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 C19orf18Q8NEA5 215 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 OR52P1PQ8NH57 321 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 LHFPL5Q8TAF8 219 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 SMAP2Q8WU79 429 aaPredicted RBP9.43□□□□□ -0.9
FOXN4-201ENST00000299162 RSC1A1Q92681 617 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 FBXW5Q969U6 566 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 SLC35A4Q96G79 324 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 SDHCQ99643 169 aaPredicted RBP9.43□□□□□ -0.9
FOXN4-201ENST00000299162 RAB11FIP5Q9BXF6 653 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 PPIL3Q9H2H8 161 aaKnown RBP9.43□□□□□ -0.9
FOXN4-201ENST00000299162 KIR3DX1Q9H7L2 352 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 BEX1Q9HBH7 125 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 ACSS1Q9NUB1 689 aaPredicted RBP9.43□□□□□ -0.9
FOXN4-201ENST00000299162 REV1Q9UBZ9 1251 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 DIMT1Q9UNQ2 313 aaKnown RBP9.43□□□□□ -0.9
FOXN4-201ENST00000299162 WDR45Q9Y484 360 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 CSNK1G3Q9Y6M4 447 aa9.43□□□□□ -0.9
FOXN4-201ENST00000299162 CELSR3Q9NYQ7 3312 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 A0A087WUU8 490 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 ZC3H12DA2A288 527 aaKnown RBP9.42□□□□□ -0.9
FOXN4-201ENST00000299162 ZAR1LA6NP61 321 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 PEX12O00623 359 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 MYL12BO14950 172 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 ZNF780AO75290 641 aaPredicted RBP9.42□□□□□ -0.9
FOXN4-201ENST00000299162 SLC2A10O95528 541 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 FCER2P06734 321 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 ZNF250P15622 560 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 MAT1AQ00266 395 aaKnown RBP9.42□□□□□ -0.9
FOXN4-201ENST00000299162 ZNF91Q05481 1191 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 PRKCDQ05655 676 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 HNRNPA0Q13151 305 aaKnown RBP9.42□□□□□ -0.9
FOXN4-201ENST00000299162 GPR50Q13585 617 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 EFR3AQ14156 821 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 GRM7Q14831 915 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 TATDN3Q17R31 274 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 TMEM35AQ53FP2 167 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 USP30Q70CQ3 517 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 NRROSQ86YC3 692 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 TMEM255BQ8WV15 326 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 GATAD2BQ8WXI9 593 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 MCHR1Q99705 422 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 SEC22CQ9BRL7 303 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 C1QTNF6Q9BXI9 259 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 HCN3Q9P1Z3 774 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 ALPK3Q96L96 1907 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 EMC8O43402 210 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 NDUFS6O75380 124 aaKnown RBP9.42□□□□□ -0.9
FOXN4-201ENST00000299162 RDH16O75452 317 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 SEMA4FO95754 770 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 SSTR2P30874 369 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 DUSP5Q16690 384 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 TRIQKQ629K1 86 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 ZNF770Q6IQ21 691 aaPredicted RBP9.42□□□□□ -0.9
FOXN4-201ENST00000299162 BHLHB9Q6PI77 547 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 ASB18Q6ZVZ8 466 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 DENND6BQ8NEG7 585 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 OR4K14Q8NGD5 310 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 OR9A4Q8NGU2 314 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 SLC37A2Q8TED4 501 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 TTC9Q92623 222 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 SLC38A1Q9H2H9 487 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 SLA2Q9H6Q3 261 aa9.42□□□□□ -0.9
FOXN4-201ENST00000299162 CACYBPQ9HB71 228 aaKnown RBP9.42□□□□□ -0.9
FOXN4-201ENST00000299162 OR6C2Q9NZP2 312 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms