RNA–Protein interactions for RNA: ENST00000298428.13

SEC61A2-201, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A2, Length 1,893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-201ENST00000298428 LCN1P31025 176 aa17.04■□□□□ 0.32
SEC61A2-201ENST00000298428 RPS18P62269 152 aaKnown RBP17.04■□□□□ 0.32
SEC61A2-201ENST00000298428 KLHL26Q53HC5 615 aa17.04■□□□□ 0.32
SEC61A2-201ENST00000298428 NLGN4XQ8N0W4 816 aa17.04■□□□□ 0.32
SEC61A2-201ENST00000298428 NLGN4YQ8NFZ3 816 aaPredicted RBP17.04■□□□□ 0.32
SEC61A2-201ENST00000298428 OR5L2Q8NGL0 311 aa17.04■□□□□ 0.32
SEC61A2-201ENST00000298428 TESQ9UGI8 421 aaKnown RBP17.04■□□□□ 0.32
SEC61A2-201ENST00000298428 FARSAQ9Y285 508 aaKnown RBP17.04■□□□□ 0.32
SEC61A2-201ENST00000298428 H0YAE9 185 aa17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 SCDO00767 359 aa17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 TSPAN2O60636 221 aa17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 ZFAND5O76080 213 aa17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 OR5F1O95221 314 aa17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 OXSR1O95747 527 aaPredicted RBP17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 CYP4B1P13584 511 aa17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 CEACAM1P13688 526 aa17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 RPS15P62841 145 aaKnown RBP17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 ADARB1P78563 741 aaKnown RBP17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 ST3GAL3Q11203 375 aa17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 KCNAB2Q13303 367 aa17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 SEC23BQ15437 767 aa17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 BTBD16Q32M84 506 aa17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 KIRREL2Q6UWL6 708 aa17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 FUZQ9BT04 418 aa17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 B3GNT4Q9C0J1 378 aa17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 RIF1Q5UIP0 2472 aaKnown RBP17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 TM4SF5O14894 197 aa17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 FMO6PO60774 539 aa17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 ICOSLGO75144 302 aa17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 CYP7B1O75881 506 aa17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 CSTAP01040 98 aa17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 GNAO1P09471 354 aa17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 UBTFL6P0CB48 400 aaPredicted RBP17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 CDH2P19022 906 aaPredicted RBP17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 HTR2AP28223 471 aa17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 PNLIPRP2P54317 469 aa17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 TRAM2Q15035 370 aa17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 ZNF770Q6IQ21 691 aaPredicted RBP17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 PODNL1Q6PEZ8 512 aa17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 C16orf47Q6ZP98 133 aaPredicted RBP17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 MARCH9Q86YJ5 346 aa17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 AQP11Q8NBQ7 271 aa17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 ZNF555Q8NEP9 628 aa17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 SLC35B4Q969S0 331 aa17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 SLC41A3Q96GZ6 507 aa17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 NR1H4Q96RI1 486 aaPredicted RBP17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 POLR2J2Q9GZM3 115 aaKnown RBP17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 POLR2J3Q9H1A7 115 aaKnown RBP17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 ZNF556Q9HAH1 456 aa17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 FAM118AQ9NWS6 357 aa17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 UBAP1Q9NZ09 502 aa17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 SLC35A3Q9Y2D2 325 aa17.03■□□□□ 0.32
SEC61A2-201ENST00000298428 SH3PXD2BA1X283 911 aa17.02■□□□□ 0.32
SEC61A2-201ENST00000298428 TMEM200CA6NKL6 621 aa17.02■□□□□ 0.32
SEC61A2-201ENST00000298428 SOCS6O14544 535 aa17.02■□□□□ 0.32
SEC61A2-201ENST00000298428 OR10H3O60404 316 aa17.02■□□□□ 0.32
SEC61A2-201ENST00000298428 CLIC3O95833 236 aa17.02■□□□□ 0.32
SEC61A2-201ENST00000298428 TBXA2RP21731 343 aa17.02■□□□□ 0.32
SEC61A2-201ENST00000298428 NOVA1P51513 510 aaKnown RBP17.02■□□□□ 0.32
SEC61A2-201ENST00000298428 EXT1Q16394 746 aa17.02■□□□□ 0.32
SEC61A2-201ENST00000298428 DESI1Q6ICB0 168 aa17.02■□□□□ 0.32
SEC61A2-201ENST00000298428 OR11G2Q8NGC1 345 aa17.02■□□□□ 0.32
SEC61A2-201ENST00000298428 ELP5Q8TE02 316 aa17.02■□□□□ 0.32
SEC61A2-201ENST00000298428 IMMP1LQ96LU5 166 aa17.02■□□□□ 0.32
SEC61A2-201ENST00000298428 NIPSNAP1Q9BPW8 284 aa17.02■□□□□ 0.32
SEC61A2-201ENST00000298428 RIBC2Q9H4K1 309 aa17.02■□□□□ 0.32
SEC61A2-201ENST00000298428 ANKRD19PQ9H560 264 aa17.02■□□□□ 0.32
SEC61A2-201ENST00000298428 PAPOLBQ9NRJ5 636 aaKnown RBP17.02■□□□□ 0.32
SEC61A2-201ENST00000298428 STMND1H3BQB6 276 aa17.01■□□□□ 0.31
SEC61A2-201ENST00000298428 WWP2O00308 870 aa17.01■□□□□ 0.31
SEC61A2-201ENST00000298428 RAD1O60671 282 aa17.01■□□□□ 0.31
SEC61A2-201ENST00000298428 CBLP22681 906 aa17.01■□□□□ 0.31
SEC61A2-201ENST00000298428 OTX2P32243 289 aa17.01■□□□□ 0.31
SEC61A2-201ENST00000298428 STAT5AP42229 794 aa17.01■□□□□ 0.31
SEC61A2-201ENST00000298428 GABREP78334 506 aa17.01■□□□□ 0.31
SEC61A2-201ENST00000298428 DNASE1L3Q13609 305 aa17.01■□□□□ 0.31
SEC61A2-201ENST00000298428 OR1Q1Q15612 314 aa17.01■□□□□ 0.31
SEC61A2-201ENST00000298428 TTC23Q5W5X9 447 aa17.01■□□□□ 0.31
SEC61A2-201ENST00000298428 ZNF550Q7Z398 422 aa17.01■□□□□ 0.31
SEC61A2-201ENST00000298428 GDF7Q7Z4P5 450 aa17.01■□□□□ 0.31
SEC61A2-201ENST00000298428 GATSQ8NAP1 163 aa17.01■□□□□ 0.31
SEC61A2-201ENST00000298428 SLC38A4Q969I6 547 aa17.01■□□□□ 0.31
SEC61A2-201ENST00000298428 ZNF559Q9BR84 538 aa17.01■□□□□ 0.31
SEC61A2-201ENST00000298428 DEFB126Q9BYW3 111 aa17.01■□□□□ 0.31
SEC61A2-201ENST00000298428 POLR1BQ9H9Y6 1135 aa17.01■□□□□ 0.31
SEC61A2-201ENST00000298428 POFUT2Q9Y2G5 429 aa17.01■□□□□ 0.31
SEC61A2-201ENST00000298428 NPFFR2Q9Y5X5 522 aa17.01■□□□□ 0.31
SEC61A2-201ENST00000298428 DMXL1Q9Y485 3027 aa17.01■□□□□ 0.31
SEC61A2-201ENST00000298428 NSG1A0A0A6YYJ2 146 aa17.01■□□□□ 0.31
SEC61A2-201ENST00000298428 A0A1W2PQ72 361 aa17.01■□□□□ 0.31
SEC61A2-201ENST00000298428 TRAPPC13A5PLN9 417 aa17.01■□□□□ 0.31
SEC61A2-201ENST00000298428 C21orf140B9A014 251 aa17.01■□□□□ 0.31
SEC61A2-201ENST00000298428 UGT2B11O75310 529 aa17.01■□□□□ 0.31
SEC61A2-201ENST00000298428 GASTP01350 101 aa17.01■□□□□ 0.31
SEC61A2-201ENST00000298428 THY1P04216 161 aa17.01■□□□□ 0.31
SEC61A2-201ENST00000298428 POU2F1P14859 743 aa17.01■□□□□ 0.31
SEC61A2-201ENST00000298428 MYF6P23409 242 aa17.01■□□□□ 0.31
SEC61A2-201ENST00000298428 POLR2IP36954 125 aaKnown RBP17.01■□□□□ 0.31
SEC61A2-201ENST00000298428 DLSTP36957 453 aa17.01■□□□□ 0.31
SEC61A2-201ENST00000298428 ADH7P40394 386 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms