RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 GABRG2P18507 467 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 GNRHRP30968 328 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 EVI2BP34910 448 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 EIF4EBP2Q13542 120 aaPredicted RBP11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 LPAL2Q16609 132 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 RAB6CQ53S08 254 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 LARP4Q71RC2 724 aaKnown RBP eCLIP11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 BEST4Q8NFU0 473 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 OR4E2Q8NGC2 313 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 TCEAL3Q969E4 200 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 MRGPRX1Q96LB2 322 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 PHB2Q99623 299 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 RAB6CQ9H0N0 254 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 MYO10Q9HD67 2058 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 AQP9O43315 295 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 SSX5O60225 188 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 IFNA17P01571 189 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 ITGB7P26010 798 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 CAMLGP49069 296 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 RPS21P63220 83 aaKnown RBP11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 GTDC1Q4AE62 458 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 AGAP7PQ5VUJ5 663 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 C3P1Q6ZMU1 363 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 GALNT10Q86SR1 603 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 SIMC1Q8NDZ2 872 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 HUS1BQ8NHY5 278 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 RELTQ969Z4 430 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 PTERQ96BW5 349 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 MFFQ9GZY8 342 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 MRPL15Q9P015 296 aaKnown RBP11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 BTNL2Q9UIR0 455 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 KLHL21Q9UJP4 597 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 KCNK6Q9Y257 313 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 MUSKO15146 869 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 B4GALT2O60909 372 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 TGM6O95932 706 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 IL32P24001 234 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 DLX5P56178 289 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 TBPL1P62380 186 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 GSTM4Q03013 218 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 RGNQ15493 299 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 FIP1L1Q6UN15 594 aaKnown RBP11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 SLC16A9Q7RTY1 509 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 KIAA0907Q7Z7F0 614 aaPredicted RBP11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 ZNF283Q8N7M2 679 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 RLN3Q8WXF3 142 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 SNX18Q96RF0 628 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 RBCK1Q9BYM8 510 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 PRMT8Q9NR22 394 aaPredicted RBP11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 ASB6Q9NWX5 421 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 QPCTLQ9NXS2 382 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 COQ3Q9NZJ6 369 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 CD300AQ9UGN4 299 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 B4GAT1O43505 415 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 TSPAN15O95858 294 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 IL1AP01583 271 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 CAPNS1P04632 268 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 RPS17P08708 135 aaKnown RBP11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 ADRB3P13945 408 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 PRKCAP17252 672 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 GALEQ14376 348 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 PXKQ7Z7A4 578 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 OR7G1Q8NGA0 311 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 OR2T4Q8NH00 348 aa11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 CPEB1Q9BZB8 566 aaKnown RBP11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 ZNF701Q9NV72 531 aaPredicted RBP11.14□□□□□ -0.63
SYNGAP1-201ENST00000293748 OR6C74A6NCV1 312 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 ACOT7O00154 380 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 MLLT3P42568 568 aaPredicted RBP11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 RIDAP52758 137 aaKnown RBP11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 IER5LQ5T953 404 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 ZNF691Q5VV52 312 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 KIAA0895LQ68EN5 471 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 C3orf33Q6P1S2 294 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 PLBD1Q6P4A8 553 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 NXPE4Q6UWF7 544 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 Q6ZNX1 250 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 ZNF440Q8IYI8 595 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 PARP16Q8N5Y8 322 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 NPWQ8N729 165 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 MDGA1Q8NFP4 955 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 VAPAQ9P0L0 249 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 PCDHGA5Q9Y5G8 931 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 LOC105369274A0A096LPK9 316 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 TNFSF8P32971 234 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 GABRA3P34903 492 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 GPR4P46093 362 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 ARRB1P49407 418 aaPredicted RBP11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 TAP2Q03519 686 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 RAB40BQ12829 278 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 SGCBQ16585 318 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 OR4N4Q8N0Y3 316 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 B3GNT7Q8NFL0 401 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 GPR150Q8NGU9 434 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 SCAMP4Q969E2 229 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 THAP7Q9BT49 309 aaPredicted RBP11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 A0A1B0GTW7 788 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 TVP23AA6NH52 213 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 UGDHO60701 494 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 OR8U9P0C7N5 309 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms