RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 SACM1LQ9NTJ5 587 aa12.02□□□□□ -0.49
PTCD1-201ENST00000292478 OBP2AQ9NY56 170 aa12.02□□□□□ -0.49
PTCD1-201ENST00000292478 A0A0A6YYC8 382 aaPredicted RBP12.02□□□□□ -0.49
PTCD1-201ENST00000292478 TMX2-CTNND1H3BSU7 103 aa12.02□□□□□ -0.49
PTCD1-201ENST00000292478 I3L1I5 382 aaPredicted RBP12.02□□□□□ -0.49
PTCD1-201ENST00000292478 CHMP24386 653 aa12.02□□□□□ -0.49
PTCD1-201ENST00000292478 RPL34P49207 117 aaKnown RBP12.02□□□□□ -0.49
PTCD1-201ENST00000292478 EMP2P54851 167 aa12.02□□□□□ -0.49
PTCD1-201ENST00000292478 CTBSQ01459 385 aa12.02□□□□□ -0.49
PTCD1-201ENST00000292478 NR0B2Q15466 257 aa12.02□□□□□ -0.49
PTCD1-201ENST00000292478 METTL11BQ5VVY1 283 aa12.02□□□□□ -0.49
PTCD1-201ENST00000292478 FAM205BPQ63HN1 556 aa12.02□□□□□ -0.49
PTCD1-201ENST00000292478 CCDC28AQ8IWP9 274 aa12.02□□□□□ -0.49
PTCD1-201ENST00000292478 KHSRPQ92945 711 aaKnown RBP eCLIP12.02□□□□□ -0.49
PTCD1-201ENST00000292478 FOXRED1Q96CU9 486 aaPredicted RBP12.02□□□□□ -0.49
PTCD1-201ENST00000292478 NLKQ9UBE8 527 aa12.02□□□□□ -0.49
PTCD1-201ENST00000292478 CBLCQ9ULV8 474 aa12.02□□□□□ -0.49
PTCD1-201ENST00000292478 LRP5O75197 1615 aa12.02□□□□□ -0.49
PTCD1-201ENST00000292478 IL1AP01583 271 aa12.02□□□□□ -0.49
PTCD1-201ENST00000292478 CD34P28906 385 aa12.02□□□□□ -0.49
PTCD1-201ENST00000292478 SLC6A11P48066 632 aa12.02□□□□□ -0.49
PTCD1-201ENST00000292478 HBA1P69905 142 aa12.02□□□□□ -0.49
PTCD1-201ENST00000292478 BCL7AQ4VC05 210 aa12.02□□□□□ -0.49
PTCD1-201ENST00000292478 ENTPD8Q5MY95 495 aa12.02□□□□□ -0.49
PTCD1-201ENST00000292478 AWAT2Q6E213 333 aa12.02□□□□□ -0.49
PTCD1-201ENST00000292478 ZNF767PQ75MW2 155 aa12.02□□□□□ -0.49
PTCD1-201ENST00000292478 KCTD20Q7Z5Y7 419 aa12.02□□□□□ -0.49
PTCD1-201ENST00000292478 ZNF595Q8IYB9 648 aa12.02□□□□□ -0.49
PTCD1-201ENST00000292478 ARL14Q8N4G2 192 aa12.02□□□□□ -0.49
PTCD1-201ENST00000292478 OR5H2Q8NGV7 314 aa12.02□□□□□ -0.49
PTCD1-201ENST00000292478 OR52D1Q9H346 318 aa12.02□□□□□ -0.49
PTCD1-201ENST00000292478 TMEM185BQ9H7F4 350 aa12.02□□□□□ -0.49
PTCD1-201ENST00000292478 FOXD2O60548 495 aaPredicted RBP12.01□□□□□ -0.49
PTCD1-201ENST00000292478 RGS6P49758 472 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 PRKXP51817 358 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 TAS2R31P59538 309 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 TSPAN31Q12999 210 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 ATXN7L3Q14CW9 347 aaPredicted RBP12.01□□□□□ -0.49
PTCD1-201ENST00000292478 CNIH2Q6PI25 160 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 PTRH1Q86Y79 214 aaKnown RBP12.01□□□□□ -0.49
PTCD1-201ENST00000292478 IL17RCQ8NAC3 791 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 ADAMTS14Q8WXS8 1223 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 INTS14Q96SY0 518 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 VRK1Q99986 396 aaPredicted RBP12.01□□□□□ -0.49
PTCD1-201ENST00000292478 INIPQ9NRY2 104 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 CSNK1G3Q9Y6M4 447 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 SLC33A1O00400 549 aaPredicted RBP12.01□□□□□ -0.49
PTCD1-201ENST00000292478 IMPA1P29218 277 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 GJA4P35212 333 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 FOXK1P85037 733 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 TMEM244Q5VVB8 128 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 FAM180BQ6P0A1 224 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 TPRA1Q86W33 373 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 LRRC56Q8IYG6 542 aaPredicted RBP12.01□□□□□ -0.49
PTCD1-201ENST00000292478 ZMYND19Q96E35 227 aaPredicted RBP12.01□□□□□ -0.49
PTCD1-201ENST00000292478 INSM2Q96T92 566 aaPredicted RBP12.01□□□□□ -0.49
PTCD1-201ENST00000292478 CRB3Q9BUF7 120 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 ZBP1Q9H171 429 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 PAQR5Q9NXK6 330 aaPredicted RBP12.01□□□□□ -0.49
PTCD1-201ENST00000292478 TAS2R3Q9NYW6 316 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 SMAD9O15198 467 aaKnown RBP12.01□□□□□ -0.49
PTCD1-201ENST00000292478 ACPPP15309 386 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 RAB38P57729 211 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 REEP5Q00765 189 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 SLC5A12Q1EHB4 618 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 TMEM52BQ4KMG9 183 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 PRAMEF8Q5VWM4 474 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 PRAMEF7Q5VXH5 474 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 SLCO4C1Q6ZQN7 724 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 ZNF442Q9H7R0 627 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 UBQLN4Q9NRR5 601 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 PGAP2Q9UHJ9 254 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 SLC6A14Q9UN76 642 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 A0A1B0GUL6 1792 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 BTAF1O14981 1849 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 IFNA2P01563 188 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 AMY2AP04746 511 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 CD6P30203 668 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 SF3B4Q15427 424 aaKnown RBP eCLIP12.01□□□□□ -0.49
PTCD1-201ENST00000292478 HSF5Q4G112 596 aaPredicted RBP12.01□□□□□ -0.49
PTCD1-201ENST00000292478 TP53I3Q53FA7 332 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 PIP5KL1Q5T9C9 394 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 EEF1A1P5Q5VTE0 462 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 TMEM184AQ6ZMB5 413 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 OR14L1PQ8NHC6 308 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 TOE1Q96GM8 510 aaKnown RBP12.01□□□□□ -0.49
PTCD1-201ENST00000292478 TCTN2Q96GX1 697 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 MSANTD3Q96H12 275 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 EGLN2Q96KS0 407 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 ARL6Q9H0F7 186 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 ERVK-19Q9WJR5 959 aa12.01□□□□□ -0.49
PTCD1-201ENST00000292478 FUOMA2VDF0 154 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 GGT3PA6NGU5 568 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 EFCAB7A8K855 629 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 HOXA9P31269 272 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 FOLR3P41439 243 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 TSFMP43897 325 aaKnown RBP12□□□□□ -0.49
PTCD1-201ENST00000292478 XCR1P46094 333 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 MAN2A2P49641 1150 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 HES5Q5TA89 166 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms