RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 NDUFB2O95178 105 aa15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 RAB5CP51148 216 aa15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 CAV3P56539 151 aa15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 LEXMQ3ZCV2 418 aa15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 ACSM3Q53FZ2 586 aa15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 OR1J4Q8NGS1 313 aa15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 MACROD1Q9BQ69 325 aa15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 HIF3AQ9Y2N7 669 aa15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 SETD1AO15047 1707 aaKnown RBP15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 HOXC11O43248 304 aaPredicted RBP15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 KLF8O95600 359 aaPredicted RBP15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 LALBAP00709 142 aa15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 PGCP20142 388 aa15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 PSMB10P40306 273 aa15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 SNU13P55769 128 aaKnown RBP15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 ALKAL2Q6UX46 152 aa15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 KCTD20Q7Z5Y7 419 aa15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 LAX1Q8IWV1 398 aa15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 SLC35F2Q8IXU6 374 aa15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 PITX2Q99697 317 aa15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 SLC6A16Q9GZN6 736 aa15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 CA5BQ9Y2D0 317 aa15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 HRH3Q9Y5N1 445 aa15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 UBBP0CG47 229 aa15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 UBCP0CG48 685 aaKnown RBP15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 CAMLGP49069 296 aa15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 RAB40BQ12829 278 aa15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 RAB41Q5JT25 222 aa15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 C6orf132Q5T0Z8 1188 aa15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 SLC18B1Q6NT16 456 aa15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 C11orf49Q9H6J7 331 aa15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 E9PI62 339 aa15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 GYPBP06028 91 aa15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 CCR7P32248 378 aa15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 RGRP47804 291 aa15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 NKX6-1P78426 367 aaPredicted RBP15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 PIP5KL1Q5T9C9 394 aa15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 QRSL1Q9H0R6 528 aaKnown RBP15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 ARNT2Q9HBZ2 717 aa15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 COPS3Q9UNS2 423 aa15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 NAALAD2Q9Y3Q0 740 aa15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 NPIPA5A0A0B4J1W7 369 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 FAM155AB1AL88 458 aaPredicted RBP15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 NPIPA2E9PIF3 369 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 NPIPA7E9PJI5 369 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 NPIPA3F8WFD2 350 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 KCNJ13O60928 360 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 IL33O95760 270 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 LATS1O95835 1130 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 IFNA5P01569 189 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 OR8U9P0C7N5 309 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 NPIPA8P0DM63 369 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 PIM1P11309 404 aaPredicted RBP15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 AHRP35869 848 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 TAP2Q03519 686 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 ELOAQ14241 798 aaKnown RBP15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 OR2G6Q5TZ20 316 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 TRIM46Q7Z4K8 759 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 SDR9C7Q8NEX9 313 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 TGM7Q96PF1 710 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 OR1F2PQ96R84 312 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 METTL17Q9H7H0 456 aaPredicted RBP15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 TMPRSS11EQ9UL52 423 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 KCNS2Q9ULS6 477 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 WASF3Q9UPY6 502 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 MROH6A6NGR9 719 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 EDIL3O43854 480 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 WDR5P61964 334 aaKnown RBP15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 LRIF1Q5T3J3 769 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 AVPI1Q5T686 147 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 ZC3H14Q6PJT7 736 aaKnown RBP15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 ARRDC2Q8TBH0 407 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 NINJ1Q92982 152 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 MAP6Q96JE9 813 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 IFT22Q9H7X7 185 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 PCDHA9Q9Y5H5 950 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 IER3IP1Q9Y5U9 82 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 RAB3DO95716 219 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 MT-ND4P03905 459 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 DCNP07585 359 aaKnown RBP15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 S100PP25815 95 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 KIAA1211LQ6NV74 962 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 C3orf33Q6P1S2 294 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 PODNL1Q6PEZ8 512 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 CLEC14AQ86T13 490 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 CBARPQ8N350 705 aaPredicted RBP15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 ZNF611Q8N823 705 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 C19orf25Q9UFG5 118 aaPredicted RBP15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 hCG_1807616A0A1W2PRN6 198 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 AGPAT2O15120 278 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 ZNF780AO75290 641 aaPredicted RBP15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 SGSHP51688 502 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 MLLT11Q13015 90 aaPredicted RBP15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 OR56B4Q8NH76 319 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 ZBED3Q96IU2 234 aaPredicted RBP15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 EMC7Q9NPA0 242 aa15.5■□□□□ 0.07
SH3RF1-201ENST00000284637 RAB19A4D1S5 217 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 KNG1P01042 644 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 VIPR2P41587 438 aa15.49■□□□□ 0.07
SH3RF1-201ENST00000284637 HTR3AP46098 478 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms