RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 C2orf68Q2NKX9 166 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 TMEM31Q5JXX7 168 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 ATPAF1Q5TC12 328 aaPredicted RBP8.63□□□□□ -1.03
PDGFC-201ENST00000274071 NCEH1Q6PIU2 408 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 PAQR3Q6TCH7 311 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 SLC30A8Q8IWU4 369 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 TCEANCQ8N8B7 351 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 UBAC2Q8NBM4 344 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 OR5M1Q8NGP8 315 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 ZNF461Q8TAF7 563 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 C3orf49Q96BT1 292 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 BSCL2Q96G97 398 aaPredicted RBP8.63□□□□□ -1.03
PDGFC-201ENST00000274071 ZDHHC5Q9C0B5 715 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 UQCC1Q9NVA1 299 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 MRPL15Q9P015 296 aaKnown RBP8.63□□□□□ -1.03
PDGFC-201ENST00000274071 TESQ9UGI8 421 aaKnown RBP8.63□□□□□ -1.03
PDGFC-201ENST00000274071 CBLCQ9ULV8 474 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 NINQ8N4C6 2090 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 MCM3APO60318 1980 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 SHROOM3Q8TF72 1996 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 MYLKQ15746 1914 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 FNDC1Q4ZHG4 1894 aaPredicted RBP8.63□□□□□ -1.03
PDGFC-201ENST00000274071 CREBL2O60519 120 aaPredicted RBP8.62□□□□□ -1.03
PDGFC-201ENST00000274071 UGDHO60701 494 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 OTCP00480 354 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 PMP2P02689 132 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 HOXB5P09067 269 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 GAAP10253 952 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 RAC2P15153 192 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 ZNF25P17030 456 aaPredicted RBP8.62□□□□□ -1.03
PDGFC-201ENST00000274071 HOXA5P20719 270 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 MSX1P28360 303 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 S100A3P33764 101 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 GJA5P36382 358 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 PMELP40967 661 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 MMP15P51511 669 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 OR2B8PP59922 312 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 GMFBP60983 142 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 HGFACQ04756 655 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 ARHGAP40Q5TG30 622 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 TPGS2Q68CL5 300 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 PAPD4Q6PIY7 484 aaKnown RBP8.62□□□□□ -1.03
PDGFC-201ENST00000274071 RNF165Q6ZSG1 346 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 DNAJB7Q7Z6W7 309 aaPredicted RBP8.62□□□□□ -1.03
PDGFC-201ENST00000274071 TMEM200AQ86VY9 491 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 FBXO16Q8IX29 292 aaPredicted RBP8.62□□□□□ -1.03
PDGFC-201ENST00000274071 DEFB106AQ8N104 65 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 PXYLP1Q8TE99 480 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 NDRG1Q92597 394 aaKnown RBP8.62□□□□□ -1.03
PDGFC-201ENST00000274071 ZNF75AQ96N20 296 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 LRFN5Q96NI6 719 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 CNTNAP3BQ96NU0 1288 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 FAIM2Q9BWQ8 316 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 LAT2Q9GZY6 243 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 ASCL3Q9NQ33 180 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 ZMYM5Q9UJ78 669 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 FZD4Q9ULV1 537 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 ST3GAL5Q9UNP4 418 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 KCNIP3Q9Y2W7 256 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 GOLT1BQ9Y3E0 138 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 PRAMEF25A6NGN4 478 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 ZNF705EA8MWA4 302 aaPredicted RBP8.62□□□□□ -1.03
PDGFC-201ENST00000274071 BLOC1S5-TXNDC5H3BN57 136 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 KLK8O60259 260 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 FMO6PO60774 539 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 CRTAPO75718 401 aaPredicted RBP8.62□□□□□ -1.03
PDGFC-201ENST00000274071 HLA-DPB1P04440 258 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 INHAP05111 366 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 ADH1AP07327 375 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 SRPRAP08240 638 aaKnown RBP8.62□□□□□ -1.03
PDGFC-201ENST00000274071 THBS2P35442 1172 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 SLC11A2P49281 568 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 LUMP51884 338 aaPredicted RBP8.62□□□□□ -1.03
PDGFC-201ENST00000274071 F2RL1P55085 397 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 DAOAP59103 153 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 CDK6Q00534 326 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 BEX3Q00994 111 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 TAP2Q03519 686 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 BIKQ13323 160 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 DYRK1AQ13627 763 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 SLC25A52Q3SY17 297 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 ZNF626Q68DY1 528 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 ARHGAP11AQ6P4F7 1023 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 TRIM46Q7Z4K8 759 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 HMGB4Q8WW32 186 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 RGMAQ96B86 450 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 MED8Q96G25 268 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 SPATA33Q96N06 139 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 F2RL3Q96RI0 385 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 ALG8Q9BVK2 526 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 FSD1LQ9BXM9 530 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 TMEM134Q9H6X4 195 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 MRPS30Q9NP92 439 aaKnown RBP8.62□□□□□ -1.03
PDGFC-201ENST00000274071 MYOZ1Q9NP98 299 aaPredicted RBP8.62□□□□□ -1.03
PDGFC-201ENST00000274071 TREM1Q9NP99 234 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 C1GALT1Q9NS00 363 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 ACER3Q9NUN7 267 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 PARPBPQ9NWS1 579 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 SPG21Q9NZD8 308 aa8.62□□□□□ -1.03
PDGFC-201ENST00000274071 OR12D3Q9UGF7 316 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms