RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 PIK3IP1Q96FE7 263 aa17.06■□□□□ 0.32
TM6SF1-201ENST00000258909 RNF145Q96MT1 663 aa17.06■□□□□ 0.32
TM6SF1-201ENST00000258909 SLC39A3Q9BRY0 314 aa17.06■□□□□ 0.32
TM6SF1-201ENST00000258909 UBQLN4Q9NRR5 601 aa17.06■□□□□ 0.32
TM6SF1-201ENST00000258909 MED17Q9NVC6 651 aa17.06■□□□□ 0.32
TM6SF1-201ENST00000258909 GIN1Q9NXP7 522 aa17.06■□□□□ 0.32
TM6SF1-201ENST00000258909 LGALS13Q9UHV8 139 aa17.06■□□□□ 0.32
TM6SF1-201ENST00000258909 NAV3Q8IVL0 2385 aa17.06■□□□□ 0.32
TM6SF1-201ENST00000258909 NPIPA5A0A0B4J1W7 369 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 DEFB108AA8MXU0 73 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 NPIPA7E9PJI5 369 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 SCDO00767 359 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 NPIPA8P0DM63 369 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 CD8BP10966 210 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 ZNF17P17021 662 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 MAPK1P28482 360 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 SERPINB4P48594 390 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 MLC1Q15049 377 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 GUSBP1Q15486 140 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 PLPPR5Q32ZL2 321 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 ATP6AP1LQ52LC2 224 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 EXOSC6Q5RKV6 272 aaKnown RBP17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 C6orf136Q5SQH8 315 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 IL23RQ5VWK5 629 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 ZCCHC12Q6PEW1 402 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 FAM214BQ7L5A3 538 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 WDR75Q8IWA0 830 aaKnown RBP17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 GTPBP8Q8N3Z3 284 aaPredicted RBP17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 OR10D3Q8NH80 312 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 BTBD2Q9BX70 525 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 KLHL4Q9C0H6 718 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 ELOVL5Q9NYP7 299 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 ROS1P08922 2347 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 A0A087WZY1 265 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 C16orf97H3BN30 126 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 TNFSF11O14788 317 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 CXCL13O43927 109 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 C6orf47O95873 294 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 IL11P20809 199 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 PSMA4P25789 261 aaKnown RBP17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 ZNF41P51814 821 aaPredicted RBP17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 TP53BP2Q13625 1128 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 CTU2Q2VPK5 515 aaKnown RBP17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 CPTPQ5TA50 214 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 HEATR5AQ86XA9 2040 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 FNDC5Q8NAU1 212 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 POC1BQ8TC44 478 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 ADGRG7Q96K78 797 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 CXorf36Q9H7Y0 433 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 NEUROD4Q9HD90 331 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 DLL4Q9NR61 685 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 ZNF226Q9NYT6 803 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 STOML1Q9UBI4 398 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 KCNE3Q9Y6H6 103 aa17.05■□□□□ 0.32
TM6SF1-201ENST00000258909 ARID1AO14497 2285 aa17.04■□□□□ 0.32
TM6SF1-201ENST00000258909 UQCRHLA0A096LP55 91 aa17.04■□□□□ 0.32
TM6SF1-201ENST00000258909 A0A0J9YW62 118 aa17.04■□□□□ 0.32
TM6SF1-201ENST00000258909 OIP5O43482 229 aa17.04■□□□□ 0.32
TM6SF1-201ENST00000258909 PLGP00747 810 aaPredicted RBP17.04■□□□□ 0.32
TM6SF1-201ENST00000258909 FCGR2AP12318 317 aa17.04■□□□□ 0.32
TM6SF1-201ENST00000258909 CCT3P49368 545 aaKnown RBP17.04■□□□□ 0.32
TM6SF1-201ENST00000258909 SPDYE7PQ495Y7 208 aa17.04■□□□□ 0.32
TM6SF1-201ENST00000258909 B4GALNT2Q8NHY0 566 aa17.04■□□□□ 0.32
TM6SF1-201ENST00000258909 PHOSPHO1Q8TCT1 267 aa17.04■□□□□ 0.32
TM6SF1-201ENST00000258909 OR5P2Q8WZ92 322 aa17.04■□□□□ 0.32
TM6SF1-201ENST00000258909 ZBTB8AQ96BR9 441 aa17.04■□□□□ 0.32
TM6SF1-201ENST00000258909 PIGUQ9H490 435 aa17.04■□□□□ 0.32
TM6SF1-201ENST00000258909 PRR14LQ5THK1 2151 aa17.03■□□□□ 0.32
TM6SF1-201ENST00000258909 BPGMP07738 259 aa17.03■□□□□ 0.32
TM6SF1-201ENST00000258909 DDX5P17844 614 aaKnown RBP17.03■□□□□ 0.32
TM6SF1-201ENST00000258909 CRYGSP22914 178 aa17.03■□□□□ 0.32
TM6SF1-201ENST00000258909 SHC1P29353 583 aa17.03■□□□□ 0.32
TM6SF1-201ENST00000258909 HOXC12P31275 282 aa17.03■□□□□ 0.32
TM6SF1-201ENST00000258909 RPL3P39023 403 aaKnown RBP17.03■□□□□ 0.32
TM6SF1-201ENST00000258909 RAC1P63000 192 aa17.03■□□□□ 0.32
TM6SF1-201ENST00000258909 OCRLQ01968 901 aa17.03■□□□□ 0.32
TM6SF1-201ENST00000258909 ZNF117Q03924 483 aa17.03■□□□□ 0.32
TM6SF1-201ENST00000258909 FGFBP1Q14512 234 aa17.03■□□□□ 0.32
TM6SF1-201ENST00000258909 CDC73Q6P1J9 531 aa17.03■□□□□ 0.32
TM6SF1-201ENST00000258909 OR5AK3PQ8NH89 298 aa17.03■□□□□ 0.32
TM6SF1-201ENST00000258909 OR2V1Q8NHB1 315 aa17.03■□□□□ 0.32
TM6SF1-201ENST00000258909 ACTRT2Q8TDY3 377 aa17.03■□□□□ 0.32
TM6SF1-201ENST00000258909 AENQ8WTP8 325 aaKnown RBP17.03■□□□□ 0.32
TM6SF1-201ENST00000258909 TUBGCP3Q96CW5 907 aa17.03■□□□□ 0.32
TM6SF1-201ENST00000258909 HS3ST6Q96QI5 342 aa17.03■□□□□ 0.32
TM6SF1-201ENST00000258909 STACQ99469 402 aa17.03■□□□□ 0.32
TM6SF1-201ENST00000258909 ACTRT3Q9BYD9 372 aa17.03■□□□□ 0.32
TM6SF1-201ENST00000258909 ROPN1BQ9BZX4 212 aaPredicted RBP17.03■□□□□ 0.32
TM6SF1-201ENST00000258909 ZNF395Q9H8N7 513 aaPredicted RBP17.03■□□□□ 0.32
TM6SF1-201ENST00000258909 ROPN1Q9HAT0 212 aaPredicted RBP17.03■□□□□ 0.32
TM6SF1-201ENST00000258909 DUSP22Q9NRW4 184 aa17.03■□□□□ 0.32
TM6SF1-201ENST00000258909 MCTS1Q9ULC4 181 aaKnown RBP17.03■□□□□ 0.32
TM6SF1-201ENST00000258909 EMC9Q9Y3B6 208 aa17.03■□□□□ 0.32
TM6SF1-201ENST00000258909 A0A1W2PQD3 144 aa17.02■□□□□ 0.32
TM6SF1-201ENST00000258909 WDR91A4D1P6 747 aa17.02■□□□□ 0.32
TM6SF1-201ENST00000258909 CFLARO15519 480 aa17.02■□□□□ 0.32
TM6SF1-201ENST00000258909 LYPLA1O75608 230 aaPredicted RBP17.02■□□□□ 0.32
TM6SF1-201ENST00000258909 SYNGR4O95473 234 aa17.02■□□□□ 0.32
TM6SF1-201ENST00000258909 ATP6V1C1P21283 382 aa17.02■□□□□ 0.32
TM6SF1-201ENST00000258909 LCN1P31025 176 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms