RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 OSMP13725 252 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 DRD2P14416 443 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 EIF2DP41214 584 aaKnown RBP8.44□□□□□ -1.06
CKAP2-201ENST00000258607 SOX2P48431 317 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 RBBP4Q09028 425 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 SPHARQ15513 63 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 SMU1Q2TAY7 513 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 SLC27A4Q6P1M0 643 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 DEFB123Q8N688 67 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 C19orf47Q8N9M1 422 aaKnown RBP8.44□□□□□ -1.06
CKAP2-201ENST00000258607 PJA1Q8NG27 643 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 OR56A1Q8NGH5 318 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 OR52E2Q8NGJ4 325 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 GPR119Q8TDV5 335 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 IPCEF1Q8WWN9 437 aaPredicted RBP8.44□□□□□ -1.06
CKAP2-201ENST00000258607 HLA-CQ95604 372 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 MUL1Q969V5 352 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 ERMAPQ96PL5 475 aaPredicted RBP8.44□□□□□ -1.06
CKAP2-201ENST00000258607 GFM1Q96RP9 751 aaKnown RBP8.44□□□□□ -1.06
CKAP2-201ENST00000258607 EPYCQ99645 322 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 ASPNQ9BXN1 380 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 ISG20L2Q9H9L3 353 aaKnown RBP8.44□□□□□ -1.06
CKAP2-201ENST00000258607 TRPV4Q9HBA0 871 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 AP3M1Q9Y2T2 418 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 IGHV1OR15-9A0A0B4J2B8 117 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 OR5K3A6NET4 321 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 TGFBR3LH3BV60 316 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 SLC16A6O15403 523 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 SEC14L2O76054 403 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 FBXO45P0C2W1 286 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 ZNF10P21506 573 aaPredicted RBP8.44□□□□□ -1.06
CKAP2-201ENST00000258607 PYCR1P32322 319 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 PCBP3P57721 371 aaKnown RBP8.44□□□□□ -1.06
CKAP2-201ENST00000258607 COPZ1P61923 177 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 ERVK-25P63136 954 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 POU6F2P78424 691 aaPredicted RBP8.44□□□□□ -1.06
CKAP2-201ENST00000258607 EEF1A2Q05639 463 aaKnown RBP8.44□□□□□ -1.06
CKAP2-201ENST00000258607 ZNF425Q6IV72 752 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 FRRS1Q6ZNA5 592 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 IKBIPQ70UQ0 350 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 KANSL1Q7Z3B3 1105 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 NAXEQ8NCW5 288 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 MAFAQ8NHW3 353 aaPredicted RBP8.44□□□□□ -1.06
CKAP2-201ENST00000258607 HCAR2Q8TDS4 363 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 SPATA5L1Q9BVQ7 753 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 PLGRKTQ9HBL7 147 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 SEC14L4Q9UDX3 406 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 ENPP5Q9UJA9 477 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 ZNF443Q9Y2A4 671 aaPredicted RBP8.44□□□□□ -1.06
CKAP2-201ENST00000258607 LTBP2Q14767 1821 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 PKDREJQ9NTG1 2253 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 FAM25AB3EWG3 89 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 FAM25CB3EWG5 89 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 FAM25GB3EWG6 89 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 IDSB3KWA1 339 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 LOC110117498-PIK3R3F6TDL0 507 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 RFPL3O75679 317 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 GPR75O95800 540 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 CCDC159P0C7I6 412 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 GLULP15104 373 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 FOLR1P15328 257 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 PCMT1P22061 227 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 SDC2P34741 201 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 PCYT1AP49585 367 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 RPS25P62851 125 aaKnown RBP8.44□□□□□ -1.06
CKAP2-201ENST00000258607 C1DQ13901 141 aaKnown RBP8.44□□□□□ -1.06
CKAP2-201ENST00000258607 MYBPC3Q14896 1274 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 OR1Q1Q15612 314 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 TP53I3Q53FA7 332 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 TMEM35AQ53FP2 167 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 C1QL3Q5VWW1 255 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 HLA-DQA1Q5Y7H0 255 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 ASB18Q6ZVZ8 466 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 GLCCI1Q86VQ1 547 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 IZUMO1Q8IYV9 350 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 ANKK1Q8NFD2 765 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 FANK1Q8TC84 345 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 UBASH3BQ8TF42 649 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 KLHL6Q8WZ60 621 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 DCLRE1CQ96SD1 692 aaKnown RBP8.44□□□□□ -1.06
CKAP2-201ENST00000258607 TMEM38AQ9H6F2 299 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 APMAPQ9HDC9 416 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 OBP2AQ9NY56 170 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 MRPL15Q9P015 296 aaKnown RBP8.44□□□□□ -1.06
CKAP2-201ENST00000258607 PSORS1C1Q9UIG5 152 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 A0A087WV48 116 aa8.43□□□□□ -1.06
CKAP2-201ENST00000258607 C12orf71A8MTZ7 269 aa8.43□□□□□ -1.06
CKAP2-201ENST00000258607 CLDN25C9JDP6 229 aa8.43□□□□□ -1.06
CKAP2-201ENST00000258607 EIF1AYO14602 144 aaKnown RBP8.43□□□□□ -1.06
CKAP2-201ENST00000258607 STX11O75558 287 aa8.43□□□□□ -1.06
CKAP2-201ENST00000258607 MAKP20794 623 aa8.43□□□□□ -1.06
CKAP2-201ENST00000258607 DCKP27707 260 aa8.43□□□□□ -1.06
CKAP2-201ENST00000258607 RGS6P49758 472 aa8.43□□□□□ -1.06
CKAP2-201ENST00000258607 MRPS21P82921 87 aaKnown RBP8.43□□□□□ -1.06
CKAP2-201ENST00000258607 RUNX1T1Q06455 604 aa8.43□□□□□ -1.06
CKAP2-201ENST00000258607 ST3GAL3Q11203 375 aa8.43□□□□□ -1.06
CKAP2-201ENST00000258607 KIR2DS3Q14952 304 aa8.43□□□□□ -1.06
CKAP2-201ENST00000258607 RGS21Q2M5E4 152 aa8.43□□□□□ -1.06
CKAP2-201ENST00000258607 FAHD1Q6P587 224 aa8.43□□□□□ -1.06
CKAP2-201ENST00000258607 LAX1Q8IWV1 398 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms