RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 RPP38P78345 283 aaKnown RBP13.08□□□□□ -0.32
SDF2-201ENST00000247020 RAPSNQ13702 412 aa13.08□□□□□ -0.32
SDF2-201ENST00000247020 NCF4Q15080 339 aa13.08□□□□□ -0.32
SDF2-201ENST00000247020 OR1Q1Q15612 314 aa13.08□□□□□ -0.32
SDF2-201ENST00000247020 NNATQ16517 81 aa13.08□□□□□ -0.32
SDF2-201ENST00000247020 KLHL26Q53HC5 615 aa13.08□□□□□ -0.32
SDF2-201ENST00000247020 LCN10Q6JVE6 187 aa13.08□□□□□ -0.32
SDF2-201ENST00000247020 PAPD4Q6PIY7 484 aaKnown RBP13.08□□□□□ -0.32
SDF2-201ENST00000247020 SHISA6Q6ZSJ9 500 aa13.08□□□□□ -0.32
SDF2-201ENST00000247020 RRM2BQ7LG56 351 aa13.08□□□□□ -0.32
SDF2-201ENST00000247020 GDF7Q7Z4P5 450 aa13.08□□□□□ -0.32
SDF2-201ENST00000247020 PIP4P1Q86T03 277 aa13.08□□□□□ -0.32
SDF2-201ENST00000247020 DEPDC4Q8N2C3 294 aa13.08□□□□□ -0.32
SDF2-201ENST00000247020 APCDD1LQ8NCL9 501 aa13.08□□□□□ -0.32
SDF2-201ENST00000247020 FAM71CQ8NEG0 241 aa13.08□□□□□ -0.32
SDF2-201ENST00000247020 MR1Q95460 341 aa13.08□□□□□ -0.32
SDF2-201ENST00000247020 GAL3ST4Q96RP7 486 aa13.08□□□□□ -0.32
SDF2-201ENST00000247020 WDR77Q9BQA1 342 aaPredicted RBP13.08□□□□□ -0.32
SDF2-201ENST00000247020 FAM117AQ9C073 453 aa13.08□□□□□ -0.32
SDF2-201ENST00000247020 TMEM27Q9HBJ8 222 aa13.08□□□□□ -0.32
SDF2-201ENST00000247020 EXOSC3Q9NQT5 275 aaKnown RBP13.08□□□□□ -0.32
SDF2-201ENST00000247020 PCDHGA3Q9Y5H0 932 aa13.08□□□□□ -0.32
SDF2-201ENST00000247020 KIF26BQ2KJY2 2108 aa13.08□□□□□ -0.32
SDF2-201ENST00000247020 A0A087WXM4 84 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 A6NHS1 94 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 TRIM64CA6NLI5 447 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 AGRPO00253 132 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 SCDO00767 359 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 TSPAN2O60636 221 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 SEC24DO94855 1032 aaPredicted RBP13.07□□□□□ -0.32
SDF2-201ENST00000247020 CLPTM1O96005 669 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 CCDC159P0C7I6 412 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 HPGDP15428 266 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 IL12BP29460 328 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 CRISP1P54107 249 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 NRG3P56975 720 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 RNF4P78317 190 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 PLAURQ03405 335 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 CD47Q08722 323 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 TARDBPQ13148 414 aaKnown RBP eCLIP13.07□□□□□ -0.32
SDF2-201ENST00000247020 C6orf141Q5SZD1 244 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 FNDC7Q5VTL7 733 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 FAAH2Q6GMR7 532 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 HSDL2Q6YN16 418 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 MBOAT2Q6ZWT7 520 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 ZNF614Q8N883 585 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 PRSS33Q8NF86 280 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 TSPAN14Q8NG11 270 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 OR5L2Q8NGL0 311 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 WDR36Q8NI36 951 aaKnown RBP13.07□□□□□ -0.32
SDF2-201ENST00000247020 PIGXQ8TBF5 258 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 GNPDA2Q8TDQ7 276 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 CNOT9Q92600 299 aaKnown RBP13.07□□□□□ -0.32
SDF2-201ENST00000247020 GTPBP3Q969Y2 492 aaKnown RBP13.07□□□□□ -0.32
SDF2-201ENST00000247020 MPP4Q96JB8 637 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 HS6ST2Q96MM7 605 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 CCNL2Q96S94 520 aaPredicted RBP13.07□□□□□ -0.32
SDF2-201ENST00000247020 B3GNT4Q9C0J1 378 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 REV1Q9UBZ9 1251 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 PCDHGA6Q9Y5G7 932 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 B3GALT1Q9Y5Z6 326 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 A0A0B4J2E0 115 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 A0A1B0GX12 115 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 A0A1W2PQ72 361 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 EIF4E1BA6NMX2 242 aaKnown RBP13.07□□□□□ -0.32
SDF2-201ENST00000247020 CHP2O43745 196 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 GDF9O60383 454 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 MPZL2O60487 215 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 ABCB7O75027 752 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 CSO75390 466 aaKnown RBP13.07□□□□□ -0.32
SDF2-201ENST00000247020 SMNDC1O75940 238 aaKnown RBP eCLIP13.07□□□□□ -0.32
SDF2-201ENST00000247020 DLGAP3O95886 979 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 MT-CO3P00414 261 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 CSTAP01040 98 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 RAB40ALP0C0E4 278 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 JMJD7P0C870 316 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 CYP4B1P13584 511 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 NAGAP17050 411 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 MMP11P24347 488 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 HTR2AP28223 471 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 NBL1P41271 181 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 ACAA2P42765 397 aaKnown RBP13.07□□□□□ -0.32
SDF2-201ENST00000247020 HLCSP50747 726 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 NR0B1P51843 470 aaKnown RBP13.07□□□□□ -0.32
SDF2-201ENST00000247020 SLC26A5P58743 744 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 CSNK2BP67870 215 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 IL5RAQ01344 420 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 PLCXD2Q0VAA5 305 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 TSPAN31Q12999 210 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 ZNF730Q6ZMV8 503 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 ZER1Q7Z7L7 766 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 CACTIN-AS1Q8N1I8 211 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 OR2Y1Q8NGV0 311 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 OR4C3Q8NH37 302 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 EFHD2Q96C19 240 aaPredicted RBP13.07□□□□□ -0.32
SDF2-201ENST00000247020 PARD6AQ9NPB6 346 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 CTPS2Q9NRF8 586 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 TOR4AQ9NXH8 423 aa13.07□□□□□ -0.32
SDF2-201ENST00000247020 OR6C70A6NIJ9 312 aa13.06□□□□□ -0.32
SDF2-201ENST00000247020 ZAR1LA6NP61 321 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms