RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 TCEA2Q15560 299 aa20.13■□□□□ 0.81
SH2D3A-201ENST00000245908 YIF1BQ5BJH7 314 aa20.13■□□□□ 0.81
SH2D3A-201ENST00000245908 EOGTQ5NDL2 527 aa20.13■□□□□ 0.81
SH2D3A-201ENST00000245908 EXOSC6Q5RKV6 272 aaKnown RBP20.13■□□□□ 0.81
SH2D3A-201ENST00000245908 FHL5Q5TD97 284 aa20.13■□□□□ 0.81
SH2D3A-201ENST00000245908 CNIH2Q6PI25 160 aa20.13■□□□□ 0.81
SH2D3A-201ENST00000245908 METAP1DQ6UB28 335 aaPredicted RBP20.13■□□□□ 0.81
SH2D3A-201ENST00000245908 ENPP7Q6UWV6 458 aa20.13■□□□□ 0.81
SH2D3A-201ENST00000245908 SIRT6Q8N6T7 355 aa20.13■□□□□ 0.81
SH2D3A-201ENST00000245908 NEIL3Q8TAT5 605 aa20.13■□□□□ 0.81
SH2D3A-201ENST00000245908 ASB12Q8WXK4 309 aa20.13■□□□□ 0.81
SH2D3A-201ENST00000245908 ELSPBP1Q96BH3 223 aa20.13■□□□□ 0.81
SH2D3A-201ENST00000245908 RNF170Q96K19 258 aa20.13■□□□□ 0.81
SH2D3A-201ENST00000245908 GABRG3Q99928 467 aa20.13■□□□□ 0.81
SH2D3A-201ENST00000245908 PPP1R3EQ9H7J1 279 aa20.13■□□□□ 0.81
SH2D3A-201ENST00000245908 NDRG2Q9UN36 371 aaKnown RBP20.13■□□□□ 0.81
SH2D3A-201ENST00000245908 C19orf53Q9UNZ5 99 aaPredicted RBP20.13■□□□□ 0.81
SH2D3A-201ENST00000245908 SLC22A7Q9Y694 548 aa20.13■□□□□ 0.81
SH2D3A-201ENST00000245908 SHISA3A0PJX4 238 aa20.12■□□□□ 0.81
SH2D3A-201ENST00000245908 HCN1O60741 890 aa20.12■□□□□ 0.81
SH2D3A-201ENST00000245908 CTSVO60911 334 aa20.12■□□□□ 0.81
SH2D3A-201ENST00000245908 DNAJB6O75190 326 aa20.12■□□□□ 0.81
SH2D3A-201ENST00000245908 SSTR4P31391 388 aa20.12■□□□□ 0.81
SH2D3A-201ENST00000245908 ATP6V1E1P36543 226 aa20.12■□□□□ 0.81
SH2D3A-201ENST00000245908 BDH1Q02338 343 aa20.12■□□□□ 0.81
SH2D3A-201ENST00000245908 GPR68Q15743 365 aa20.12■□□□□ 0.81
SH2D3A-201ENST00000245908 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.12■□□□□ 0.81
SH2D3A-201ENST00000245908 CCNJQ5T5M9 372 aa20.12■□□□□ 0.81
SH2D3A-201ENST00000245908 IQCF2Q8IXL9 164 aa20.12■□□□□ 0.81
SH2D3A-201ENST00000245908 ZNF619Q8N2I2 560 aa20.12■□□□□ 0.81
SH2D3A-201ENST00000245908 OR52D1Q9H346 318 aa20.12■□□□□ 0.81
SH2D3A-201ENST00000245908 PAQR5Q9NXK6 330 aaPredicted RBP20.12■□□□□ 0.81
SH2D3A-201ENST00000245908 URADA6NGE7 173 aa20.11■□□□□ 0.81
SH2D3A-201ENST00000245908 RFXAPO00287 272 aa20.11■□□□□ 0.81
SH2D3A-201ENST00000245908 HPGDSO60760 199 aa20.11■□□□□ 0.81
SH2D3A-201ENST00000245908 PTNP21246 168 aa20.11■□□□□ 0.81
SH2D3A-201ENST00000245908 PTBP1P26599 531 aaKnown RBP eCLIP20.11■□□□□ 0.81
SH2D3A-201ENST00000245908 APEX1P27695 318 aaKnown RBP20.11■□□□□ 0.81
SH2D3A-201ENST00000245908 NFATC4Q14934 902 aa20.11■□□□□ 0.81
SH2D3A-201ENST00000245908 MAPK14Q16539 360 aa20.11■□□□□ 0.81
SH2D3A-201ENST00000245908 TRMT12Q53H54 448 aaKnown RBP20.11■□□□□ 0.81
SH2D3A-201ENST00000245908 PRRT3Q5FWE3 981 aa20.11■□□□□ 0.81
SH2D3A-201ENST00000245908 LCN1P1Q5VSP4 162 aa20.11■□□□□ 0.81
SH2D3A-201ENST00000245908 PARM1Q6UWI2 310 aa20.11■□□□□ 0.81
SH2D3A-201ENST00000245908 SPERTQ8NA61 448 aa20.11■□□□□ 0.81
SH2D3A-201ENST00000245908 FGF14Q92915 247 aa20.11■□□□□ 0.81
SH2D3A-201ENST00000245908 DPH1Q9BZG8 443 aa20.11■□□□□ 0.81
SH2D3A-201ENST00000245908 IRF2BPLQ9H1B7 796 aa20.11■□□□□ 0.81
SH2D3A-201ENST00000245908 FN3KQ9H479 309 aa20.11■□□□□ 0.81
SH2D3A-201ENST00000245908 FAM183AA6NL82 134 aa20.11■□□□□ 0.81
SH2D3A-201ENST00000245908 DBIP07108 87 aaKnown RBP20.11■□□□□ 0.81
SH2D3A-201ENST00000245908 YES1P07947 543 aa20.11■□□□□ 0.81
SH2D3A-201ENST00000245908 CFL1P23528 166 aaKnown RBP20.11■□□□□ 0.81
SH2D3A-201ENST00000245908 HTR2AP28223 471 aa20.11■□□□□ 0.81
SH2D3A-201ENST00000245908 FXYD6P3P58550 94 aa20.11■□□□□ 0.81
SH2D3A-201ENST00000245908 TBRG1Q3YBR2 411 aa20.11■□□□□ 0.81
SH2D3A-201ENST00000245908 CEP78Q5JTW2 689 aa20.11■□□□□ 0.81
SH2D3A-201ENST00000245908 FCRL6Q6DN72 434 aa20.11■□□□□ 0.81
SH2D3A-201ENST00000245908 NIPAL3Q6P499 406 aa20.11■□□□□ 0.81
SH2D3A-201ENST00000245908 KLBQ86Z14 1044 aa20.11■□□□□ 0.81
SH2D3A-201ENST00000245908 RNF113BQ8IZP6 322 aaKnown RBP20.11■□□□□ 0.81
SH2D3A-201ENST00000245908 CCL4L1Q8NHW4 92 aa20.11■□□□□ 0.81
SH2D3A-201ENST00000245908 FANK1Q8TC84 345 aa20.11■□□□□ 0.81
SH2D3A-201ENST00000245908 SYNDIG1Q9H7V2 258 aa20.11■□□□□ 0.81
SH2D3A-201ENST00000245908 TMEM74BQ9NUR3 256 aa20.11■□□□□ 0.81
SH2D3A-201ENST00000245908 TRANK1O15050 2925 aa20.11■□□□□ 0.81
SH2D3A-201ENST00000245908 LYPD3O95274 346 aa20.1■□□□□ 0.81
SH2D3A-201ENST00000245908 PRG2P13727 222 aa20.1■□□□□ 0.81
SH2D3A-201ENST00000245908 UGT2B7P16662 529 aa20.1■□□□□ 0.81
SH2D3A-201ENST00000245908 KIR2DL3P43628 341 aa20.1■□□□□ 0.81
SH2D3A-201ENST00000245908 DCST2Q5T1A1 773 aa20.1■□□□□ 0.81
SH2D3A-201ENST00000245908 WDR88Q6ZMY6 472 aa20.1■□□□□ 0.81
SH2D3A-201ENST00000245908 TMEM91Q6ZNR0 172 aa20.1■□□□□ 0.81
SH2D3A-201ENST00000245908 OR51G2Q8NGK0 314 aa20.1■□□□□ 0.81
SH2D3A-201ENST00000245908 RNF121Q9H920 327 aa20.1■□□□□ 0.81
SH2D3A-201ENST00000245908 FBRSQ9HAH7 460 aa20.1■□□□□ 0.81
SH2D3A-201ENST00000245908 SIDT1Q9NXL6 827 aaKnown RBP20.1■□□□□ 0.81
SH2D3A-201ENST00000245908 BOLA1Q9Y3E2 137 aa20.1■□□□□ 0.81
SH2D3A-201ENST00000245908 BHLHE40O14503 412 aa20.1■□□□□ 0.81
SH2D3A-201ENST00000245908 NCR1O76036 304 aa20.1■□□□□ 0.81
SH2D3A-201ENST00000245908 COL9A1P20849 921 aa20.1■□□□□ 0.81
SH2D3A-201ENST00000245908 ZNF10P21506 573 aaPredicted RBP20.1■□□□□ 0.81
SH2D3A-201ENST00000245908 MYL9P24844 172 aa20.1■□□□□ 0.81
SH2D3A-201ENST00000245908 ACTR1BP42025 376 aa20.1■□□□□ 0.81
SH2D3A-201ENST00000245908 EVX1P49640 407 aa20.1■□□□□ 0.81
SH2D3A-201ENST00000245908 ACTR1AP61163 376 aa20.1■□□□□ 0.81
SH2D3A-201ENST00000245908 RIN1Q13671 783 aa20.1■□□□□ 0.81
SH2D3A-201ENST00000245908 PLBD1Q6P4A8 553 aa20.1■□□□□ 0.81
SH2D3A-201ENST00000245908 MZT2AQ6P582 158 aa20.1■□□□□ 0.81
SH2D3A-201ENST00000245908 FIGLAQ6QHK4 219 aa20.1■□□□□ 0.81
SH2D3A-201ENST00000245908 RD3Q7Z3Z2 195 aa20.1■□□□□ 0.81
SH2D3A-201ENST00000245908 ZNF438Q7Z4V0 828 aa20.1■□□□□ 0.81
SH2D3A-201ENST00000245908 OR52L1Q8NGH7 329 aa20.1■□□□□ 0.81
SH2D3A-201ENST00000245908 SLC7A6Q92536 515 aa20.1■□□□□ 0.81
SH2D3A-201ENST00000245908 DMRTB1Q96MA1 342 aa20.1■□□□□ 0.81
SH2D3A-201ENST00000245908 HS6ST2Q96MM7 605 aa20.1■□□□□ 0.81
SH2D3A-201ENST00000245908 WDR92Q96MX6 357 aa20.1■□□□□ 0.81
SH2D3A-201ENST00000245908 RPP25Q9BUL9 199 aaKnown RBP20.1■□□□□ 0.81
SH2D3A-201ENST00000245908 RNF32Q9H0A6 362 aa20.1■□□□□ 0.81
SH2D3A-201ENST00000245908 IGFLR1Q9H665 355 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms