RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 ENKD1Q9H0I2 346 aa10.66□□□□□ -0.7
PKP2-201ENST00000070846 PRDM9Q9NQV7 894 aa10.66□□□□□ -0.7
PKP2-201ENST00000070846 SCN1AP35498 2009 aa10.66□□□□□ -0.7
PKP2-201ENST00000070846 PRAMEF33A0A0G2JMD5 474 aa10.66□□□□□ -0.7
PKP2-201ENST00000070846 C5orf67F2Z3F1 127 aa10.66□□□□□ -0.7
PKP2-201ENST00000070846 ARHGAP33O14559 1287 aa10.66□□□□□ -0.7
PKP2-201ENST00000070846 CASC3O15234 703 aaKnown RBP10.66□□□□□ -0.7
PKP2-201ENST00000070846 ENTPD6O75354 484 aa10.66□□□□□ -0.7
PKP2-201ENST00000070846 MRPL33O75394 65 aaKnown RBP10.66□□□□□ -0.7
PKP2-201ENST00000070846 ALDOCP09972 364 aaKnown RBP10.66□□□□□ -0.7
PKP2-201ENST00000070846 IRF2P14316 349 aa10.66□□□□□ -0.7
PKP2-201ENST00000070846 CNR2P34972 360 aa10.66□□□□□ -0.7
PKP2-201ENST00000070846 MAD2L1BPQ15013 274 aaPredicted RBP10.66□□□□□ -0.7
PKP2-201ENST00000070846 TCTN1Q2MV58 587 aa10.66□□□□□ -0.7
PKP2-201ENST00000070846 RUNDC3AQ59EK9 446 aa10.66□□□□□ -0.7
PKP2-201ENST00000070846 TMEM215Q68D42 235 aa10.66□□□□□ -0.7
PKP2-201ENST00000070846 XKR5Q6UX68 686 aa10.66□□□□□ -0.7
PKP2-201ENST00000070846 ASB18Q6ZVZ8 466 aa10.66□□□□□ -0.7
PKP2-201ENST00000070846 TMEM17Q86X19 198 aa10.66□□□□□ -0.7
PKP2-201ENST00000070846 ANKK1Q8NFD2 765 aa10.66□□□□□ -0.7
PKP2-201ENST00000070846 OR9K2Q8NGE7 335 aa10.66□□□□□ -0.7
PKP2-201ENST00000070846 OR5T2Q8NGG2 359 aa10.66□□□□□ -0.7
PKP2-201ENST00000070846 FKBP10Q96AY3 582 aa10.66□□□□□ -0.7
PKP2-201ENST00000070846 TESCQ96BS2 214 aa10.66□□□□□ -0.7
PKP2-201ENST00000070846 SLC7A6OSQ96CW6 309 aaPredicted RBP10.66□□□□□ -0.7
PKP2-201ENST00000070846 BPIFA2Q96DR5 249 aa10.66□□□□□ -0.7
PKP2-201ENST00000070846 MUCL1Q96DR8 90 aa10.66□□□□□ -0.7
PKP2-201ENST00000070846 CDCP1Q9H5V8 836 aa10.66□□□□□ -0.7
PKP2-201ENST00000070846 NMNAT1Q9HAN9 279 aaPredicted RBP10.66□□□□□ -0.7
PKP2-201ENST00000070846 FAM86C1Q9NVL1 165 aa10.66□□□□□ -0.7
PKP2-201ENST00000070846 CSNK1G3Q9Y6M4 447 aa10.66□□□□□ -0.7
PKP2-201ENST00000070846 NUP214P35658 2090 aaPredicted RBP10.65□□□□□ -0.7
PKP2-201ENST00000070846 KLRC4-KLRK1H3BQV0 150 aa10.65□□□□□ -0.7
PKP2-201ENST00000070846 CHRM4P08173 479 aa10.65□□□□□ -0.7
PKP2-201ENST00000070846 SLC35E2P0CK97 266 aa10.65□□□□□ -0.7
PKP2-201ENST00000070846 PCGF2P35227 344 aa10.65□□□□□ -0.7
PKP2-201ENST00000070846 RAB15P59190 212 aa10.65□□□□□ -0.7
PKP2-201ENST00000070846 PRPS1P60891 318 aa10.65□□□□□ -0.7
PKP2-201ENST00000070846 ERVK-25P63136 954 aa10.65□□□□□ -0.7
PKP2-201ENST00000070846 ACTC1P68032 377 aa10.65□□□□□ -0.7
PKP2-201ENST00000070846 ACTA1P68133 377 aa10.65□□□□□ -0.7
PKP2-201ENST00000070846 TMEM236Q5W0B7 351 aa10.65□□□□□ -0.7
PKP2-201ENST00000070846 CPZQ66K79 652 aa10.65□□□□□ -0.7
PKP2-201ENST00000070846 TMEM207Q6UWW9 146 aa10.65□□□□□ -0.7
PKP2-201ENST00000070846 MED25Q71SY5 747 aa10.65□□□□□ -0.7
PKP2-201ENST00000070846 SHFQ7M4L6 423 aa10.65□□□□□ -0.7
PKP2-201ENST00000070846 CROCCP3Q8IVE0 287 aa10.65□□□□□ -0.7
PKP2-201ENST00000070846 CPOQ8IVL8 374 aa10.65□□□□□ -0.7
PKP2-201ENST00000070846 SLC46A1Q96NT5 459 aa10.65□□□□□ -0.7
PKP2-201ENST00000070846 LMF2Q9BU23 707 aaKnown RBP10.65□□□□□ -0.7
PKP2-201ENST00000070846 GPN1Q9HCN4 374 aaPredicted RBP10.65□□□□□ -0.7
PKP2-201ENST00000070846 EXOSC1Q9Y3B2 195 aaKnown RBP10.65□□□□□ -0.7
PKP2-201ENST00000070846 ECM29Q5VYK3 1845 aa10.65□□□□□ -0.7
PKP2-201ENST00000070846 DOCK2Q92608 1830 aa10.65□□□□□ -0.7
PKP2-201ENST00000070846 MEN1O00255 615 aa10.65□□□□□ -0.7
PKP2-201ENST00000070846 CSO75390 466 aaKnown RBP10.65□□□□□ -0.7
PKP2-201ENST00000070846 ARHGDIBP52566 201 aa10.65□□□□□ -0.7
PKP2-201ENST00000070846 HSD17B7P56937 341 aa10.65□□□□□ -0.7
PKP2-201ENST00000070846 SCGB2B2Q4G0G5 96 aa10.65□□□□□ -0.7
PKP2-201ENST00000070846 GGTA1PQ4G0N0 100 aa10.65□□□□□ -0.7
PKP2-201ENST00000070846 LIPKQ5VXJ0 399 aa10.65□□□□□ -0.7
PKP2-201ENST00000070846 LCN8Q6JVE9 175 aa10.65□□□□□ -0.7
PKP2-201ENST00000070846 ZMYND19Q96E35 227 aaPredicted RBP10.65□□□□□ -0.7
PKP2-201ENST00000070846 LRRC61Q9BV99 259 aa10.65□□□□□ -0.7
PKP2-201ENST00000070846 ITPAQ9BY32 194 aa10.65□□□□□ -0.7
PKP2-201ENST00000070846 ULBP2Q9BZM5 246 aa10.65□□□□□ -0.7
PKP2-201ENST00000070846 CLMPQ9H6B4 373 aa10.65□□□□□ -0.7
PKP2-201ENST00000070846 ZNF160Q9HCG1 818 aa10.65□□□□□ -0.7
PKP2-201ENST00000070846 WDR37Q9Y2I8 494 aa10.65□□□□□ -0.7
PKP2-201ENST00000070846 LRRC42Q9Y546 428 aa10.65□□□□□ -0.7
PKP2-201ENST00000070846 MKRN2OSH3BPM6 223 aa10.65□□□□□ -0.71
PKP2-201ENST00000070846 PLPP1O14494 284 aa10.65□□□□□ -0.71
PKP2-201ENST00000070846 FZD6O60353 706 aa10.65□□□□□ -0.71
PKP2-201ENST00000070846 RETP07949 1114 aa10.65□□□□□ -0.71
PKP2-201ENST00000070846 MTNR1AP48039 350 aa10.65□□□□□ -0.71
PKP2-201ENST00000070846 MS4A2Q01362 244 aa10.65□□□□□ -0.71
PKP2-201ENST00000070846 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.65□□□□□ -0.71
PKP2-201ENST00000070846 GLT8D1Q68CQ7 371 aa10.65□□□□□ -0.71
PKP2-201ENST00000070846 ZFP41Q8N8Y5 198 aa10.65□□□□□ -0.71
PKP2-201ENST00000070846 SLC16A11Q8NCK7 471 aa10.65□□□□□ -0.71
PKP2-201ENST00000070846 CADM4Q8NFZ8 388 aa10.65□□□□□ -0.71
PKP2-201ENST00000070846 NINJ1Q92982 152 aa10.65□□□□□ -0.71
PKP2-201ENST00000070846 RDH12Q96NR8 316 aa10.65□□□□□ -0.71
PKP2-201ENST00000070846 GINS4Q9BRT9 223 aa10.65□□□□□ -0.71
PKP2-201ENST00000070846 YTHDF1Q9BYJ9 559 aaKnown RBP10.65□□□□□ -0.71
PKP2-201ENST00000070846 GLIPR2Q9H4G4 154 aa10.65□□□□□ -0.71
PKP2-201ENST00000070846 DHDHQ9UQ10 334 aa10.65□□□□□ -0.71
PKP2-201ENST00000070846 CDH10Q9Y6N8 788 aa10.65□□□□□ -0.71
PKP2-201ENST00000070846 LOC105369274A0A096LPK9 316 aa10.64□□□□□ -0.71
PKP2-201ENST00000070846 LOC102723532A0A0G2JNH3 316 aa10.64□□□□□ -0.71
PKP2-201ENST00000070846 LRIT2A6NDA9 550 aa10.64□□□□□ -0.71
PKP2-201ENST00000070846 FAM166BA8MTA8 275 aa10.64□□□□□ -0.71
PKP2-201ENST00000070846 ARNTLO00327 626 aa10.64□□□□□ -0.71
PKP2-201ENST00000070846 TAPBPO15533 448 aa10.64□□□□□ -0.71
PKP2-201ENST00000070846 MITFO75030 526 aaPredicted RBP10.64□□□□□ -0.71
PKP2-201ENST00000070846 ERCC1P07992 297 aaPredicted RBP10.64□□□□□ -0.71
PKP2-201ENST00000070846 ZNF35P13682 527 aa10.64□□□□□ -0.71
PKP2-201ENST00000070846 ZNF16P17020 682 aaPredicted RBP10.64□□□□□ -0.71
PKP2-201ENST00000070846 COL9A1P20849 921 aa10.64□□□□□ -0.71
PKP2-201ENST00000070846 IDUAP35475 653 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms