RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 POU2F1P14859 743 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 DSC2Q02487 901 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 FPGSQ05932 587 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 CXCL9Q07325 125 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 NFATC3Q12968 1075 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 SPCS2Q15005 226 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 CT45A2Q5DJT8 189 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 CT45A1Q5HYN5 189 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 PAQR3Q6TCH7 311 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 CT45A3Q8NHU0 189 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 LRR1Q96L50 414 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 TRMT61BQ9BVS5 477 aaKnown RBP5.76□□□□□ -1.49
VPS13D-201ENST00000011700 B3GNT2Q9NY97 397 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 CACNG2Q9Y698 323 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 TSPAN11A1L157 253 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 DDTLA6NHG4 134 aaPredicted RBP5.76□□□□□ -1.49
VPS13D-201ENST00000011700 SULT1C4O75897 302 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 C5AR1P21730 350 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 G0S2P27469 103 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 CD81P60033 236 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 STEAP4Q687X5 459 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 COMTD1Q86VU5 262 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 ADGRG3Q86Y34 549 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 SIDT2Q8NBJ9 832 aaKnown RBP5.76□□□□□ -1.49
VPS13D-201ENST00000011700 JSRP1Q96MG2 331 aaPredicted RBP5.76□□□□□ -1.49
VPS13D-201ENST00000011700 MCOLN1Q9GZU1 580 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 ACSS1Q9NUB1 689 aaPredicted RBP5.76□□□□□ -1.49
VPS13D-201ENST00000011700 HHLA2Q9UM44 414 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 LRRK1Q38SD2 2015 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 ARGFXA6NJG6 315 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 GGT1P19440 569 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 CD52P31358 61 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 KDELR2P33947 212 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 BNIP3Q12983 259 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 OR4N5Q8IXE1 308 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 GPR137CQ8N3F9 429 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 OR5B17Q8NGF7 314 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 IMP4Q96G21 291 aaKnown RBP5.76□□□□□ -1.49
VPS13D-201ENST00000011700 EMC7Q9NPA0 242 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 UFSP2Q9NUQ7 469 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 ERVK13-1Q9NX77 482 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 TIMM22Q9Y584 194 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 SDK2Q58EX2 2172 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 ANKRD63C9JTQ0 380 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 ARVCFO00192 962 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 SOX1O00570 391 aaPredicted RBP5.76□□□□□ -1.49
VPS13D-201ENST00000011700 AQP9O43315 295 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 TYROBPO43914 113 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 MAFKO60675 156 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 STBD1O95210 358 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 TUBG1P23258 451 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 RRADP55042 308 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 RAB1AP62820 205 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 HSF5Q4G112 596 aaPredicted RBP5.76□□□□□ -1.49
VPS13D-201ENST00000011700 TIGD3Q6B0B8 471 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 SBSNQ6UWP8 590 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 SSX8Q7RTT4 187 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 TXNDC5Q8NBS9 432 aaKnown RBP5.76□□□□□ -1.49
VPS13D-201ENST00000011700 BBS1Q8NFJ9 593 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 LURAP1Q96LR2 239 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 OR51J1Q9H342 316 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 SEMA4GQ9NTN9 838 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 PLEKHJ1Q9NW61 149 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 PLEK2Q9NYT0 353 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 ZNF236Q9UL36 1845 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 CYC1P08574 325 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 ZNF91Q05481 1191 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 LSAMPQ13449 338 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 PPA1Q15181 289 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 DUSP6Q16828 381 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 LEG1Q6P5S2 330 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 CLEC20AQ6ZU45 233 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 COMMD1Q8N668 190 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 ABHD11Q8NFV4 315 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 DUSP19Q8WTR2 217 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 FCRL1Q96LA6 429 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 CARS2Q9HA77 564 aaKnown RBP5.75□□□□□ -1.49
VPS13D-201ENST00000011700 PAQR5Q9NXK6 330 aaPredicted RBP5.75□□□□□ -1.49
VPS13D-201ENST00000011700 GPR34Q9UPC5 381 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 A0A1W2PPV4 95 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 A0A1W2PQL4 384 aaPredicted RBP5.75□□□□□ -1.49
VPS13D-201ENST00000011700 ARHGAP33O14559 1287 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 PLRG1O43660 514 aaKnown RBP5.75□□□□□ -1.49
VPS13D-201ENST00000011700 RFX2P48378 723 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 CLCNKAP51800 687 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 PON2Q15165 354 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 YIF1BQ5BJH7 314 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 TXNDC8Q6A555 127 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 TMEM150AQ86TG1 271 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 OR6V1Q8N148 313 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 GRHL3Q8TE85 626 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 SLC25A36Q96CQ1 311 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 ZBTB45Q96K62 511 aaPredicted RBP5.75□□□□□ -1.49
VPS13D-201ENST00000011700 MCHR1Q99705 422 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 GDE1Q9NZC3 331 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 ENPP4Q9Y6X5 453 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 SCAMP2O15127 329 aaKnown RBP5.75□□□□□ -1.49
VPS13D-201ENST00000011700 STK17BO94768 372 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 ETV4P43268 484 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 PLA2G7Q13093 441 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms