RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 ENTPD4Q9Y227 616 aa13.07□□□□□ -0.32
USH1C-201ENST00000005226 LOC105371267A0A1B0GV96 52 aa13.07□□□□□ -0.32
USH1C-201ENST00000005226 ADH5P11766 374 aa13.07□□□□□ -0.32
USH1C-201ENST00000005226 CSNK2A2P19784 350 aaPredicted RBP13.07□□□□□ -0.32
USH1C-201ENST00000005226 MAKP20794 623 aa13.07□□□□□ -0.32
USH1C-201ENST00000005226 PAICSP22234 425 aaKnown RBP13.07□□□□□ -0.32
USH1C-201ENST00000005226 ATP5A1P25705 553 aaKnown RBP13.07□□□□□ -0.32
USH1C-201ENST00000005226 PER3P56645 1201 aa13.07□□□□□ -0.32
USH1C-201ENST00000005226 DGCR2P98153 550 aa13.07□□□□□ -0.32
USH1C-201ENST00000005226 PRDX1Q06830 199 aaKnown RBP13.07□□□□□ -0.32
USH1C-201ENST00000005226 SLC36A2Q495M3 483 aa13.07□□□□□ -0.32
USH1C-201ENST00000005226 ZBTB37Q5TC79 503 aa13.07□□□□□ -0.32
USH1C-201ENST00000005226 HBMQ6B0K9 141 aa13.07□□□□□ -0.32
USH1C-201ENST00000005226 SFXN4Q6P4A7 337 aa13.07□□□□□ -0.32
USH1C-201ENST00000005226 WDR88Q6ZMY6 472 aa13.07□□□□□ -0.32
USH1C-201ENST00000005226 FBXL6Q8N531 539 aa13.07□□□□□ -0.32
USH1C-201ENST00000005226 ANGPTL6Q8NI99 470 aa13.07□□□□□ -0.32
USH1C-201ENST00000005226 CXorf40AQ8TE69 158 aa13.07□□□□□ -0.32
USH1C-201ENST00000005226 RSPRY1Q96DX4 576 aa13.07□□□□□ -0.32
USH1C-201ENST00000005226 GHITMQ9H3K2 345 aa13.07□□□□□ -0.32
USH1C-201ENST00000005226 MBNL1Q9NR56 388 aaKnown RBP13.07□□□□□ -0.32
USH1C-201ENST00000005226 PRR23AA6NEV1 266 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 J3QRE1 110 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 KLF4O43474 513 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 TOXO94900 526 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 SNRPBP14678 240 aaKnown RBP13.06□□□□□ -0.32
USH1C-201ENST00000005226 NOS3P29474 1203 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 DPTQ07507 201 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 GPR68Q15743 365 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 DECR1Q16698 335 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 ARHGAP15Q53QZ3 475 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 ABHD17CQ6PCB6 329 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 MBOAT2Q6ZWT7 520 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 OAFQ86UD1 273 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 SIAH3Q8IW03 269 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 ZNF680Q8NEM1 530 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 OR8D1Q8WZ84 308 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 OR52D1Q9H346 318 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 CREBZFQ9NS37 354 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 NKIRAS2Q9NYR9 191 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 PRKAG2Q9UGJ0 569 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 ADAM29Q9UKF5 820 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 ING4Q9UNL4 249 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 TEX13CA0A0J9YWL9 993 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 EMC8O43402 210 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 FZD7O75084 574 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 DNAJB6O75190 326 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 CLEC3AO75596 197 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 SLC22A5O76082 557 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 SOX30O94993 753 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 MT-ND4P03905 459 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 ANKRD34CP0C6C1 535 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 CEBPBP17676 345 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 HK1P19367 917 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 DRD5P21918 477 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 ITGB8P26012 769 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 MTNR1BP49286 362 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 OR12D2P58182 307 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 CDK3Q00526 305 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 FGFBP1Q14512 234 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 TEX261Q6UWH6 196 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 THSD4Q6ZMP0 1018 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 LRRC28Q86X40 367 aaPredicted RBP13.06□□□□□ -0.32
USH1C-201ENST00000005226 ZNF687Q8N1G0 1237 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 RFLNBQ8N5W9 214 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 ABHD4Q8TB40 342 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 ADAMTS15Q8TE58 950 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 PTP4A1Q93096 173 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.06□□□□□ -0.32
USH1C-201ENST00000005226 FOLH1BQ9HBA9 442 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 SLC6A20Q9NP91 592 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 SPHK1Q9NYA1 384 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 CXXC1Q9P0U4 656 aaPredicted RBP13.06□□□□□ -0.32
USH1C-201ENST00000005226 APOBEC3BQ9UH17 382 aaKnown RBP13.06□□□□□ -0.32
USH1C-201ENST00000005226 CES1P1Q9UKY3 287 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 U3KQ87 197 aa13.06□□□□□ -0.32
USH1C-201ENST00000005226 A0A1W2PRG6 482 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 DHFRP00374 187 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 TCRBP04435 133 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 F3P13726 295 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 CSF2RAP15509 400 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 PTBP1P26599 531 aaKnown RBP eCLIP13.05□□□□□ -0.32
USH1C-201ENST00000005226 TEAD1P28347 426 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 P2RY2P41231 377 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 WASP42768 502 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 ID2Q02363 134 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 ACSM1Q08AH1 577 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 ARHGAP19Q14CB8 494 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 PUS10Q3MIT2 529 aaKnown RBP13.05□□□□□ -0.32
USH1C-201ENST00000005226 BICRALQ6AI39 1079 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 NIPAL3Q6P499 406 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 MEPCEQ7L2J0 689 aaKnown RBP13.05□□□□□ -0.32
USH1C-201ENST00000005226 KCT2Q8NC54 265 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 OR7G2Q8NG99 324 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 OR56A1Q8NGH5 318 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 GANCQ8TET4 914 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 GCDHQ92947 438 aaPredicted RBP13.05□□□□□ -0.32
USH1C-201ENST00000005226 ORAI1Q96D31 301 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 COX14Q96I36 57 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 TEX12Q9BXU0 123 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms