RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Ddit4lQ8VHZ5 193 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 L2hgdhQ91YP0 464 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Gje1Q9CX92 205 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Insl5Q9WUG6 135 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Efna3O08545 230 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 JamlQ80UL9 379 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Slc22a6Q8VC69 545 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Arfgef1G3X9K3 1846 aaKnown RBP15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 4930402F06RikA2AUQ8 332 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Xpnpep2B1AVD1 674 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Crabp1P62965 137 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Spryd7Q3TFQ1 196 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Zbtb20Q8K0L9 741 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr807Q8VGI9 311 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Pex6Q99LC9 981 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Plin3Q9DBG5 437 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Trgv2A2J008 116 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 5830411N06RikB3F5L4 1112 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Adam19O35674 920 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Jmjd7P0C872 316 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Acvr1bQ61271 505 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Rab39bQ8BHC1 213 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Mal2Q8BI08 175 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Vmn1r189Q8K3N3 312 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr561Q8VGZ6 314 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Cdca3Q99M54 266 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Dnajc13D4AFX7 2248 aaKnown RBP15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Vmn2r76E9Q3F5 853 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Zfp994J3QM38 661 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Rap2bP61226 183 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 PfplQ5RKV8 702 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Elfn2Q68FM6 823 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Cnot2Q8C5L3 540 aaKnown RBP15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Cd276Q8VE98 316 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 GrifinQ9D1U0 144 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Hsf4Q9R0L1 492 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Prl8a2O54832 240 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Cdkn2bP55271 130 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 PtnP63089 168 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 ToxQ66JW3 526 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Paqr3Q6TCG8 311 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Dcun1d4Q8CCA0 292 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr307Q8VFN8 313 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Clint1Q99KN9 631 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Fundc1Q9DB70 155 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Acox3Q9EPL9 700 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Zfp955bL7N232 545 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Phox2aQ62066 280 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr304Q7TS03 333 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Mill2Q8HWE5 355 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Trappc6bQ9D289 158 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Brix1Q9DCA5 353 aaKnown RBP15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Cped1B2RX70 1026 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Man2b2O54782 1018 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Gng8P63078 70 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 MakQ04859 622 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 B3gntl1Q3U129 357 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Gpr165Q3V3A3 455 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Tmem151aQ6GQT5 468 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Fam98bQ80VD1 429 aaKnown RBP15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Vmn2r81Q80Z09 865 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr985Q8VGB4 311 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Sema4gQ9WUH7 837 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Cited4Q9WUL8 182 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Cacna1sQ02789 1880 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Gstp3F6RWR5 210 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 BC117090L7N257 96 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 RabggtbP53612 339 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Gmeb2P58929 530 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Nt5c3bQ3UFY7 300 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Commd1Q8K4M5 188 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Ifi27l2bQ8VC49 283 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Prl8a9Q9CQ58 241 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Shank1D3YZU1 2167 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Rpl23a-ps3A0A140T8M7 156 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr631F8VPJ9 319 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Fmo6J3QMN6 532 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Zdhhc2P59267 366 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Rpl23aP62751 156 aaKnown RBP15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Elf3Q3UPW2 391 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Tas2r120Q7M721 295 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Gfm1Q8K0D5 751 aaKnown RBP15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 C1qtnf12Q8R2Z0 308 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Rpl17Q9CPR4 184 aaKnown RBP15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 EmcnQ9R0H2 261 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Gm26992S4R1A3 76 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Zfp937A2ANU7 503 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr420E9Q4G0 321 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr1221L7MU53 311 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Gp1baO35930 734 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Igh-1aP01865 398 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Zfp41Q02526 198 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Amz2Q400C8 359 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr524Q7TRU0 318 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr347Q8VGK2 312 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Slc22a26Q91WJ2 552 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 B4galt3Q91YY2 395 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 TpoP35419 914 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Bpifa1P97361 278 aa15.75■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Rpp38Q80UU2 280 aa15.75■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 19.4 ms