RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Apoc2Q05020 97 aa15.39■□□□□ 0.06
Shh-201ENSMUST00000002708 Mtf1Q07243 675 aa15.39■□□□□ 0.06
Shh-201ENSMUST00000002708 Treml4Q3LRV9 263 aa15.39■□□□□ 0.06
Shh-201ENSMUST00000002708 Fam98aQ3TJZ6 515 aaKnown RBP15.39■□□□□ 0.06
Shh-201ENSMUST00000002708 Qsox2Q3TMX7 692 aa15.39■□□□□ 0.06
Shh-201ENSMUST00000002708 CcnjQ3TZI6 379 aa15.39■□□□□ 0.06
Shh-201ENSMUST00000002708 Tas2r110Q7M712 333 aa15.39■□□□□ 0.06
Shh-201ENSMUST00000002708 Lypd4Q8BVP6 246 aa15.39■□□□□ 0.06
Shh-201ENSMUST00000002708 ZxdcQ8C8V1 858 aa15.39■□□□□ 0.06
Shh-201ENSMUST00000002708 Sdr9c7Q8K3P0 313 aa15.39■□□□□ 0.06
Shh-201ENSMUST00000002708 NagsQ8R4H7 527 aa15.39■□□□□ 0.06
Shh-201ENSMUST00000002708 Tmem45bQ8VCZ2 278 aa15.39■□□□□ 0.06
Shh-201ENSMUST00000002708 Cts3Q91ZD5 332 aa15.39■□□□□ 0.06
Shh-201ENSMUST00000002708 Smarcd2Q99JR8 531 aaKnown RBP15.39■□□□□ 0.06
Shh-201ENSMUST00000002708 Ankrd10Q99LW0 415 aa15.39■□□□□ 0.06
Shh-201ENSMUST00000002708 Pex13Q9D0K1 405 aa15.39■□□□□ 0.06
Shh-201ENSMUST00000002708 Zswim2Q9D9X6 631 aa15.39■□□□□ 0.06
Shh-201ENSMUST00000002708 Ssr3Q9DCF9 185 aa15.39■□□□□ 0.06
Shh-201ENSMUST00000002708 UxtQ9WTZ0 157 aa15.39■□□□□ 0.06
Shh-201ENSMUST00000002708 RbpmsQ9WVB0 197 aaKnown RBP15.39■□□□□ 0.06
Shh-201ENSMUST00000002708 Gm21865A0A087WRL2 222 aa15.39■□□□□ 0.05
Shh-201ENSMUST00000002708 Olfr1034A0A1L1ST14 310 aa15.39■□□□□ 0.05
Shh-201ENSMUST00000002708 FpgtG5E8F4 590 aa15.39■□□□□ 0.05
Shh-201ENSMUST00000002708 Vmn2r13L7N1X2 831 aa15.39■□□□□ 0.05
Shh-201ENSMUST00000002708 Fam187bQ0VAY3 358 aa15.39■□□□□ 0.05
Shh-201ENSMUST00000002708 Olfr598Q7TRR2 319 aa15.39■□□□□ 0.05
Shh-201ENSMUST00000002708 Acsm4Q80W40 580 aa15.39■□□□□ 0.05
Shh-201ENSMUST00000002708 Klf8Q8BLM0 355 aaKnown RBP15.39■□□□□ 0.05
Shh-201ENSMUST00000002708 Ncbp2Q9CQ49 156 aaKnown RBP15.39■□□□□ 0.05
Shh-201ENSMUST00000002708 Srebf1Q9WTN3 1134 aa15.39■□□□□ 0.05
Shh-201ENSMUST00000002708 Srpk3Q9Z0G2 565 aa15.39■□□□□ 0.05
Shh-201ENSMUST00000002708 CN725425A0A087WRU1 652 aa15.39■□□□□ 0.05
Shh-201ENSMUST00000002708 Ajm1A2AJA9 974 aa15.39■□□□□ 0.05
Shh-201ENSMUST00000002708 Spats1A2RRY8 269 aa15.39■□□□□ 0.05
Shh-201ENSMUST00000002708 Cyp2j5O54749 501 aa15.39■□□□□ 0.05
Shh-201ENSMUST00000002708 OsmrO70458 971 aa15.39■□□□□ 0.05
Shh-201ENSMUST00000002708 Tbx5P70326 518 aa15.39■□□□□ 0.05
Shh-201ENSMUST00000002708 Fam46cQ5SSF7 391 aa15.39■□□□□ 0.05
Shh-201ENSMUST00000002708 Pabpc2Q62029 628 aa15.39■□□□□ 0.05
Shh-201ENSMUST00000002708 Adamtsl2Q7TSK7 957 aa15.39■□□□□ 0.05
Shh-201ENSMUST00000002708 SelenoiQ80TA1 398 aa15.39■□□□□ 0.05
Shh-201ENSMUST00000002708 Ap4e1Q80V94 1122 aa15.39■□□□□ 0.05
Shh-201ENSMUST00000002708 Kxd1Q80XH1 177 aa15.39■□□□□ 0.05
Shh-201ENSMUST00000002708 Slc26a11Q80ZD3 593 aa15.39■□□□□ 0.05
Shh-201ENSMUST00000002708 Nup107Q8BH74 926 aa15.39■□□□□ 0.05
Shh-201ENSMUST00000002708 Znf592Q8BHZ4 1262 aa15.39■□□□□ 0.05
Shh-201ENSMUST00000002708 NdnfQ8C119 568 aa15.39■□□□□ 0.05
Shh-201ENSMUST00000002708 Irf2bplQ8K3X4 775 aa15.39■□□□□ 0.05
Shh-201ENSMUST00000002708 Gpx6Q91WR8 221 aa15.39■□□□□ 0.05
Shh-201ENSMUST00000002708 Slc10a6Q9CXB2 373 aa15.39■□□□□ 0.05
Shh-201ENSMUST00000002708 MmabQ9D273 237 aa15.39■□□□□ 0.05
Shh-201ENSMUST00000002708 Acad8Q9D7B6 413 aa15.39■□□□□ 0.05
Shh-201ENSMUST00000002708 Olfr705Q9EPF7 316 aa15.39■□□□□ 0.05
Shh-201ENSMUST00000002708 Slco2a1Q9EPT5 643 aa15.39■□□□□ 0.05
Shh-201ENSMUST00000002708 Zbtb32Q9JKD9 465 aa15.39■□□□□ 0.05
Shh-201ENSMUST00000002708 Ckap5A2AGT5 2032 aaKnown RBP15.38■□□□□ 0.05
Shh-201ENSMUST00000002708 Fnd3c2A2AP83 941 aa15.38■□□□□ 0.05
Shh-201ENSMUST00000002708 Rnf39A2RT81 352 aa15.38■□□□□ 0.05
Shh-201ENSMUST00000002708 Vmn2r117K7N6V1 857 aa15.38■□□□□ 0.05
Shh-201ENSMUST00000002708 Hps1O08983 704 aa15.38■□□□□ 0.05
Shh-201ENSMUST00000002708 PdynO35417 248 aa15.38■□□□□ 0.05
Shh-201ENSMUST00000002708 Cdk5r2O35926 369 aa15.38■□□□□ 0.05
Shh-201ENSMUST00000002708 Cer1O55233 272 aa15.38■□□□□ 0.05
Shh-201ENSMUST00000002708 Nfatc1O88942 717 aa15.38■□□□□ 0.05
Shh-201ENSMUST00000002708 ChrneP20782 493 aa15.38■□□□□ 0.05
Shh-201ENSMUST00000002708 Syt4P40749 425 aa15.38■□□□□ 0.05
Shh-201ENSMUST00000002708 Cdk5P49615 292 aa15.38■□□□□ 0.05
Shh-201ENSMUST00000002708 Gen1Q8BMI4 908 aa15.38■□□□□ 0.05
Shh-201ENSMUST00000002708 Rhbdd3Q8BP97 385 aa15.38■□□□□ 0.05
Shh-201ENSMUST00000002708 Ahsa2Q8N9S3 331 aa15.38■□□□□ 0.05
Shh-201ENSMUST00000002708 Grk5Q8VEB1 590 aa15.38■□□□□ 0.05
Shh-201ENSMUST00000002708 Actl11Q9D5V1 1207 aa15.38■□□□□ 0.05
Shh-201ENSMUST00000002708 Capns2Q9D7J7 247 aa15.38■□□□□ 0.05
Shh-201ENSMUST00000002708 Znf207Q9JMD0 495 aaKnown RBP15.38■□□□□ 0.05
Shh-201ENSMUST00000002708 Tmem235B1AQL3 211 aa15.38■□□□□ 0.05
Shh-201ENSMUST00000002708 Pdlim3O70209 316 aaKnown RBP15.38■□□□□ 0.05
Shh-201ENSMUST00000002708 Klrg1O88713 188 aa15.38■□□□□ 0.05
Shh-201ENSMUST00000002708 Csn1s1P19228 313 aa15.38■□□□□ 0.05
Shh-201ENSMUST00000002708 Nkx3-2P97503 333 aa15.38■□□□□ 0.05
Shh-201ENSMUST00000002708 Mfsd2bQ3T9M1 494 aa15.38■□□□□ 0.05
Shh-201ENSMUST00000002708 Trappc13Q3TIR1 417 aa15.38■□□□□ 0.05
Shh-201ENSMUST00000002708 Kdm4dQ3U2K5 510 aa15.38■□□□□ 0.05
Shh-201ENSMUST00000002708 Rbm38Q62176 237 aaKnown RBP15.38■□□□□ 0.05
Shh-201ENSMUST00000002708 Alg8Q6P8H8 526 aa15.38■□□□□ 0.05
Shh-201ENSMUST00000002708 McubQ810S1 345 aa15.38■□□□□ 0.05
Shh-201ENSMUST00000002708 C130079G13RikQ8BUY2 280 aa15.38■□□□□ 0.05
Shh-201ENSMUST00000002708 Gipc3Q8R5M0 297 aa15.38■□□□□ 0.05
Shh-201ENSMUST00000002708 Olfr868Q8VFI8 309 aa15.38■□□□□ 0.05
Shh-201ENSMUST00000002708 Olfr103Q920Y8 313 aa15.38■□□□□ 0.05
Shh-201ENSMUST00000002708 Cers5Q9D6K9 414 aa15.38■□□□□ 0.05
Shh-201ENSMUST00000002708 Tor3aQ9ER38 385 aa15.38■□□□□ 0.05
Shh-201ENSMUST00000002708 Rnf32Q9JIT1 368 aa15.38■□□□□ 0.05
Shh-201ENSMUST00000002708 Zfp433A0A0J9YUD4 600 aa15.37■□□□□ 0.05
Shh-201ENSMUST00000002708 Gm32687A0A1W2P6H7 600 aa15.37■□□□□ 0.05
Shh-201ENSMUST00000002708 HgfQ08048 728 aa15.37■□□□□ 0.05
Shh-201ENSMUST00000002708 Defb43Q30KM9 69 aa15.37■□□□□ 0.05
Shh-201ENSMUST00000002708 Tcfl5Q32NY8 489 aa15.37■□□□□ 0.05
Shh-201ENSMUST00000002708 Ffar3Q3UFD7 319 aa15.37■□□□□ 0.05
Shh-201ENSMUST00000002708 Pydc3Q3V3Q4 588 aa15.37■□□□□ 0.05
Shh-201ENSMUST00000002708 Olfr406Q7TRX0 323 aa15.37■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms