RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 HPGDP15428 266 aa12.04□□□□□ -0.48
GTF3A-209ENST00000640289 GZMMP51124 257 aa12.04□□□□□ -0.48
GTF3A-209ENST00000640289 TDGF1P3P51864 188 aa12.04□□□□□ -0.48
GTF3A-209ENST00000640289 CRISP3P54108 245 aa12.04□□□□□ -0.48
GTF3A-209ENST00000640289 C19orf57Q0VDD7 668 aa12.04□□□□□ -0.48
GTF3A-209ENST00000640289 ART3Q13508 389 aa12.04□□□□□ -0.48
GTF3A-209ENST00000640289 ZNF141Q15928 474 aa12.04□□□□□ -0.48
GTF3A-209ENST00000640289 CYP51A1Q16850 503 aa12.04□□□□□ -0.48
GTF3A-209ENST00000640289 HYAL4Q2M3T9 481 aa12.04□□□□□ -0.48
GTF3A-209ENST00000640289 KLHL26Q53HC5 615 aa12.04□□□□□ -0.48
GTF3A-209ENST00000640289 CMPK2Q5EBM0 449 aa12.04□□□□□ -0.48
GTF3A-209ENST00000640289 TIGD3Q6B0B8 471 aa12.04□□□□□ -0.48
GTF3A-209ENST00000640289 PTOV1Q86YD1 416 aa12.04□□□□□ -0.48
GTF3A-209ENST00000640289 PLCZ1Q86YW0 608 aa12.04□□□□□ -0.48
GTF3A-209ENST00000640289 OR8J3Q8NGG0 315 aa12.04□□□□□ -0.48
GTF3A-209ENST00000640289 FBXO27Q8NI29 283 aa12.04□□□□□ -0.48
GTF3A-209ENST00000640289 DUSP19Q8WTR2 217 aa12.04□□□□□ -0.48
GTF3A-209ENST00000640289 SLX1AQ9BQ83 275 aa12.04□□□□□ -0.48
GTF3A-209ENST00000640289 GPATCH1Q9BRR8 931 aaKnown RBP12.04□□□□□ -0.48
GTF3A-209ENST00000640289 HOXD1Q9GZZ0 328 aa12.04□□□□□ -0.48
GTF3A-209ENST00000640289 DEFB127Q9H1M4 99 aa12.04□□□□□ -0.48
GTF3A-209ENST00000640289 DSN1Q9H410 356 aa12.04□□□□□ -0.48
GTF3A-209ENST00000640289 AGPAT4Q9NRZ5 378 aa12.04□□□□□ -0.48
GTF3A-209ENST00000640289 CMTM6Q9NX76 183 aa12.04□□□□□ -0.48
GTF3A-209ENST00000640289 THUMPD1Q9NXG2 353 aaKnown RBP12.04□□□□□ -0.48
GTF3A-209ENST00000640289 MED11Q9P086 117 aa12.04□□□□□ -0.48
GTF3A-209ENST00000640289 GMPR2Q9P2T1 348 aaKnown RBP12.04□□□□□ -0.48
GTF3A-209ENST00000640289 FBXL2Q9UKC9 423 aa12.04□□□□□ -0.48
GTF3A-209ENST00000640289 USP22Q9UPT9 525 aa12.04□□□□□ -0.48
GTF3A-209ENST00000640289 C15orf41Q9Y2V0 281 aa12.04□□□□□ -0.48
GTF3A-209ENST00000640289 DTNAQ9Y4J8 743 aa12.04□□□□□ -0.48
GTF3A-209ENST00000640289 EXPH5Q8NEV8 1989 aa12.04□□□□□ -0.48
GTF3A-209ENST00000640289 SMG1Q96Q15 3661 aaKnown RBP12.04□□□□□ -0.48
GTF3A-209ENST00000640289 TMEM247A6NEH6 219 aa12.03□□□□□ -0.48
GTF3A-209ENST00000640289 CLDN24A6NM45 220 aa12.03□□□□□ -0.48
GTF3A-209ENST00000640289 C5orf58C9J3I9 102 aa12.03□□□□□ -0.48
GTF3A-209ENST00000640289 ZNHIT1O43257 154 aa12.03□□□□□ -0.48
GTF3A-209ENST00000640289 OIP5O43482 229 aa12.03□□□□□ -0.48
GTF3A-209ENST00000640289 PDE9AO76083 593 aa12.03□□□□□ -0.48
GTF3A-209ENST00000640289 GUSBP08236 651 aa12.03□□□□□ -0.48
GTF3A-209ENST00000640289 ELAVL4P26378 380 aaKnown RBP12.03□□□□□ -0.48
GTF3A-209ENST00000640289 GDF1P27539 372 aa12.03□□□□□ -0.48
GTF3A-209ENST00000640289 CDK6Q00534 326 aa12.03□□□□□ -0.48
GTF3A-209ENST00000640289 HSF1Q00613 529 aa12.03□□□□□ -0.48
GTF3A-209ENST00000640289 SCARB2Q14108 478 aa12.03□□□□□ -0.48
GTF3A-209ENST00000640289 KRT72Q14CN4 511 aa12.03□□□□□ -0.48
GTF3A-209ENST00000640289 IGFBP7Q16270 282 aa12.03□□□□□ -0.48
GTF3A-209ENST00000640289 NDUFAF6Q330K2 333 aa12.03□□□□□ -0.48
GTF3A-209ENST00000640289 AP1ARQ63HQ0 302 aa12.03□□□□□ -0.48
GTF3A-209ENST00000640289 C8orf82Q6P1X6 216 aaPredicted RBP12.03□□□□□ -0.48
GTF3A-209ENST00000640289 HACD2Q6Y1H2 254 aa12.03□□□□□ -0.48
GTF3A-209ENST00000640289 MTERF4Q7Z6M4 381 aaKnown RBP12.03□□□□□ -0.48
GTF3A-209ENST00000640289 SLC22A16Q86VW1 577 aa12.03□□□□□ -0.48
GTF3A-209ENST00000640289 ZZZ3Q8IYH5 903 aa12.03□□□□□ -0.48
GTF3A-209ENST00000640289 FAM109AQ8N4B1 249 aa12.03□□□□□ -0.48
GTF3A-209ENST00000640289 ZNF527Q8NB42 609 aa12.03□□□□□ -0.48
GTF3A-209ENST00000640289 PHOSPHO1Q8TCT1 267 aa12.03□□□□□ -0.48
GTF3A-209ENST00000640289 SH3YL1Q96HL8 342 aaPredicted RBP12.03□□□□□ -0.48
GTF3A-209ENST00000640289 TREX2Q9BQ50 279 aaPredicted RBP12.03□□□□□ -0.48
GTF3A-209ENST00000640289 KLHDC3Q9BQ90 382 aa12.03□□□□□ -0.48
GTF3A-209ENST00000640289 UBQLN3Q9H347 655 aa12.03□□□□□ -0.48
GTF3A-209ENST00000640289 TMEM38AQ9H6F2 299 aa12.03□□□□□ -0.48
GTF3A-209ENST00000640289 ZDHHC11Q9H8X9 412 aa12.03□□□□□ -0.48
GTF3A-209ENST00000640289 SDHAF3Q9NRP4 125 aa12.03□□□□□ -0.48
GTF3A-209ENST00000640289 LIPGQ9Y5X9 500 aa12.03□□□□□ -0.48
GTF3A-209ENST00000640289 DSPPQ9NZW4 1301 aa12.03□□□□□ -0.48
GTF3A-209ENST00000640289 BOD1L1Q8NFC6 3051 aa12.02□□□□□ -0.48
GTF3A-209ENST00000640289 A0A0G2JPF8 293 aa12.02□□□□□ -0.49
GTF3A-209ENST00000640289 SERINC4A6NH21 518 aa12.02□□□□□ -0.49
GTF3A-209ENST00000640289 CCT8L1PA6NM43 557 aa12.02□□□□□ -0.49
GTF3A-209ENST00000640289 HNRNPCL2B2RXH8 293 aa12.02□□□□□ -0.49
GTF3A-209ENST00000640289 HNRNPCL3B7ZW38 293 aa12.02□□□□□ -0.49
GTF3A-209ENST00000640289 CDC40O60508 579 aaKnown RBP eCLIP12.02□□□□□ -0.49
GTF3A-209ENST00000640289 HNRNPCL1O60812 293 aaKnown RBP12.02□□□□□ -0.49
GTF3A-209ENST00000640289 BCAS1O75363 584 aaPredicted RBP12.02□□□□□ -0.49
GTF3A-209ENST00000640289 CBR3O75828 277 aa12.02□□□□□ -0.49
GTF3A-209ENST00000640289 HNRNPCL4P0DMR1 293 aa12.02□□□□□ -0.49
GTF3A-209ENST00000640289 SLC7A2P52569 658 aa12.02□□□□□ -0.49
GTF3A-209ENST00000640289 PSME3P61289 254 aa12.02□□□□□ -0.49
GTF3A-209ENST00000640289 CBX1P83916 185 aa12.02□□□□□ -0.49
GTF3A-209ENST00000640289 ZNF117Q03924 483 aa12.02□□□□□ -0.49
GTF3A-209ENST00000640289 C17orf67Q0P5P2 114 aa12.02□□□□□ -0.49
GTF3A-209ENST00000640289 TRPM8Q7Z2W7 1104 aa12.02□□□□□ -0.49
GTF3A-209ENST00000640289 NET1Q7Z628 596 aaPredicted RBP12.02□□□□□ -0.49
GTF3A-209ENST00000640289 SERPINA11Q86U17 422 aa12.02□□□□□ -0.49
GTF3A-209ENST00000640289 CALHM3Q86XJ0 350 aa12.02□□□□□ -0.49
GTF3A-209ENST00000640289 VRK2Q86Y07 508 aa12.02□□□□□ -0.49
GTF3A-209ENST00000640289 SLC15A3Q8IY34 581 aa12.02□□□□□ -0.49
GTF3A-209ENST00000640289 FADS6Q8N9I5 356 aa12.02□□□□□ -0.49
GTF3A-209ENST00000640289 OR2M3Q8NG83 312 aa12.02□□□□□ -0.49
GTF3A-209ENST00000640289 OR4K17Q8NGC6 315 aa12.02□□□□□ -0.49
GTF3A-209ENST00000640289 MIB2Q96AX9 1013 aa12.02□□□□□ -0.49
GTF3A-209ENST00000640289 ARSGQ96EG1 525 aa12.02□□□□□ -0.49
GTF3A-209ENST00000640289 NSL1Q96IY1 281 aa12.02□□□□□ -0.49
GTF3A-209ENST00000640289 GPR137Q96N19 417 aa12.02□□□□□ -0.49
GTF3A-209ENST00000640289 ZNF583Q96ND8 569 aa12.02□□□□□ -0.49
GTF3A-209ENST00000640289 SH3GL1Q99961 368 aa12.02□□□□□ -0.49
GTF3A-209ENST00000640289 HOPXQ9BPY8 73 aaPredicted RBP12.02□□□□□ -0.49
GTF3A-209ENST00000640289 ECSITQ9BQ95 431 aa12.02□□□□□ -0.49
GTF3A-209ENST00000640289 MTHFD2LQ9H903 347 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms