RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 SMAD4Q13485 552 aaKnown RBP19.97■□□□□ 0.79
CLN6-224ENST00000638076 TDGQ13569 410 aa19.97■□□□□ 0.79
CLN6-224ENST00000638076 PRTGQ2VWP7 1150 aa19.97■□□□□ 0.79
CLN6-224ENST00000638076 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.97■□□□□ 0.79
CLN6-224ENST00000638076 ZC3H14Q6PJT7 736 aaKnown RBP19.97■□□□□ 0.79
CLN6-224ENST00000638076 ZAR1Q86SH2 424 aa19.97■□□□□ 0.79
CLN6-224ENST00000638076 PHC2Q8IXK0 858 aa19.97■□□□□ 0.79
CLN6-224ENST00000638076 FAM174AQ8TBP5 190 aa19.97■□□□□ 0.79
CLN6-224ENST00000638076 FGF20Q9NP95 211 aaPredicted RBP19.97■□□□□ 0.79
CLN6-224ENST00000638076 CA14Q9ULX7 337 aa19.97■□□□□ 0.79
CLN6-224ENST00000638076 CDH10Q9Y6N8 788 aa19.97■□□□□ 0.79
CLN6-224ENST00000638076 IRGMA1A4Y4 181 aa19.96■□□□□ 0.79
CLN6-224ENST00000638076 NKX2-2O95096 273 aa19.96■□□□□ 0.79
CLN6-224ENST00000638076 CSF2P04141 144 aa19.96■□□□□ 0.79
CLN6-224ENST00000638076 SLC13A2Q13183 592 aa19.96■□□□□ 0.79
CLN6-224ENST00000638076 ELOCQ15369 112 aa19.96■□□□□ 0.79
CLN6-224ENST00000638076 PGGHGQ32M88 737 aa19.96■□□□□ 0.79
CLN6-224ENST00000638076 NIPAL1Q6NVV3 410 aa19.96■□□□□ 0.79
CLN6-224ENST00000638076 OR9Q1Q8NGQ5 310 aa19.96■□□□□ 0.79
CLN6-224ENST00000638076 TRMT61AQ96FX7 289 aaKnown RBP19.96■□□□□ 0.79
CLN6-224ENST00000638076 CHCHD3Q9NX63 227 aaKnown RBP19.96■□□□□ 0.79
CLN6-224ENST00000638076 STUB1Q9UNE7 303 aa19.96■□□□□ 0.79
CLN6-224ENST00000638076 TAF4O00268 1085 aa19.96■□□□□ 0.79
CLN6-224ENST00000638076 CDC123O75794 336 aaPredicted RBP19.96■□□□□ 0.79
CLN6-224ENST00000638076 KCNK2O95069 426 aa19.96■□□□□ 0.79
CLN6-224ENST00000638076 HNRNPCP07910 306 aaKnown RBP eCLIP19.96■□□□□ 0.79
CLN6-224ENST00000638076 CDH11P55287 796 aa19.96■□□□□ 0.79
CLN6-224ENST00000638076 OR2G6Q5TZ20 316 aa19.96■□□□□ 0.79
CLN6-224ENST00000638076 TUBA3EQ6PEY2 450 aa19.96■□□□□ 0.79
CLN6-224ENST00000638076 GDPGP1Q6ZNW5 385 aa19.96■□□□□ 0.79
CLN6-224ENST00000638076 SHFQ7M4L6 423 aa19.96■□□□□ 0.79
CLN6-224ENST00000638076 ARSGQ96EG1 525 aa19.96■□□□□ 0.79
CLN6-224ENST00000638076 PEX11GQ96HA9 241 aa19.96■□□□□ 0.79
CLN6-224ENST00000638076 SAMD8Q96LT4 415 aa19.96■□□□□ 0.79
CLN6-224ENST00000638076 ASPNQ9BXN1 380 aa19.96■□□□□ 0.79
CLN6-224ENST00000638076 DPH1Q9BZG8 443 aa19.96■□□□□ 0.79
CLN6-224ENST00000638076 DOLKQ9UPQ8 538 aa19.96■□□□□ 0.79
CLN6-224ENST00000638076 COQ9O75208 318 aa19.95■□□□□ 0.78
CLN6-224ENST00000638076 S1PR1P21453 382 aa19.95■□□□□ 0.78
CLN6-224ENST00000638076 MAOBP27338 520 aa19.95■□□□□ 0.78
CLN6-224ENST00000638076 CAPZBP47756 277 aa19.95■□□□□ 0.78
CLN6-224ENST00000638076 FASLGP48023 281 aa19.95■□□□□ 0.78
CLN6-224ENST00000638076 WNT4P56705 351 aa19.95■□□□□ 0.78
CLN6-224ENST00000638076 FLYWCH1Q4VC44 716 aa19.95■□□□□ 0.78
CLN6-224ENST00000638076 ZNF687Q8N1G0 1237 aa19.95■□□□□ 0.78
CLN6-224ENST00000638076 OR2T33Q8NG76 320 aa19.95■□□□□ 0.78
CLN6-224ENST00000638076 PFN4Q8NHR9 129 aa19.95■□□□□ 0.78
CLN6-224ENST00000638076 LMX1AQ8TE12 382 aa19.95■□□□□ 0.78
CLN6-224ENST00000638076 TMEM239Q8WW34 195 aa19.95■□□□□ 0.78
CLN6-224ENST00000638076 QPCTLQ9NXS2 382 aa19.95■□□□□ 0.78
CLN6-224ENST00000638076 PEX16Q9Y5Y5 336 aa19.95■□□□□ 0.78
CLN6-224ENST00000638076 TGFBR3LH3BV60 316 aa19.94■□□□□ 0.78
CLN6-224ENST00000638076 FOXS1O43638 330 aa19.94■□□□□ 0.78
CLN6-224ENST00000638076 SRPX2O60687 465 aaPredicted RBP19.94■□□□□ 0.78
CLN6-224ENST00000638076 CD38P28907 300 aa19.94■□□□□ 0.78
CLN6-224ENST00000638076 PSG6Q00889 435 aa19.94■□□□□ 0.78
CLN6-224ENST00000638076 HSDL2Q6YN16 418 aa19.94■□□□□ 0.78
CLN6-224ENST00000638076 PMM1Q92871 262 aa19.94■□□□□ 0.78
CLN6-224ENST00000638076 NUAK2Q9H093 628 aa19.94■□□□□ 0.78
CLN6-224ENST00000638076 C20orf141Q9NUB4 165 aa19.94■□□□□ 0.78
CLN6-224ENST00000638076 SLC2A10O95528 541 aa19.94■□□□□ 0.78
CLN6-224ENST00000638076 PROS1P07225 676 aa19.94■□□□□ 0.78
CLN6-224ENST00000638076 RNH1P13489 461 aaKnown RBP19.94■□□□□ 0.78
CLN6-224ENST00000638076 NME1P15531 152 aaKnown RBP19.94■□□□□ 0.78
CLN6-224ENST00000638076 GCGRP47871 477 aa19.94■□□□□ 0.78
CLN6-224ENST00000638076 BCAP31P51572 246 aa19.94■□□□□ 0.78
CLN6-224ENST00000638076 MAT1AQ00266 395 aaKnown RBP19.94■□□□□ 0.78
CLN6-224ENST00000638076 PLAURQ03405 335 aa19.94■□□□□ 0.78
CLN6-224ENST00000638076 STX4Q12846 297 aa19.94■□□□□ 0.78
CLN6-224ENST00000638076 AADACL4Q5VUY2 407 aa19.94■□□□□ 0.78
CLN6-224ENST00000638076 CLDN22Q8N7P3 220 aa19.94■□□□□ 0.78
CLN6-224ENST00000638076 HOXB13Q92826 284 aaPredicted RBP19.94■□□□□ 0.78
CLN6-224ENST00000638076 RIT1Q92963 219 aa19.94■□□□□ 0.78
CLN6-224ENST00000638076 RFKQ969G6 155 aa19.94■□□□□ 0.78
CLN6-224ENST00000638076 TCTN2Q96GX1 697 aa19.94■□□□□ 0.78
CLN6-224ENST00000638076 RBM18Q96H35 190 aaKnown RBP19.94■□□□□ 0.78
CLN6-224ENST00000638076 MED17Q9NVC6 651 aa19.94■□□□□ 0.78
CLN6-224ENST00000638076 ZNF223Q9UK11 482 aaPredicted RBP19.94■□□□□ 0.78
CLN6-224ENST00000638076 SPIN1Q9Y657 262 aaPredicted RBP19.94■□□□□ 0.78
CLN6-224ENST00000638076 CSNK1G3Q9Y6M4 447 aa19.94■□□□□ 0.78
CLN6-224ENST00000638076 USP34Q70CQ2 3546 aa19.94■□□□□ 0.78
CLN6-224ENST00000638076 TMEM129A0AVI4 362 aa19.93■□□□□ 0.78
CLN6-224ENST00000638076 HYKKA2RU49 373 aa19.93■□□□□ 0.78
CLN6-224ENST00000638076 LYPD3O95274 346 aa19.93■□□□□ 0.78
CLN6-224ENST00000638076 CPEP16870 476 aa19.93■□□□□ 0.78
CLN6-224ENST00000638076 FUT1P19526 365 aa19.93■□□□□ 0.78
CLN6-224ENST00000638076 POU3F3P20264 500 aaPredicted RBP19.93■□□□□ 0.78
CLN6-224ENST00000638076 CD27P26842 260 aa19.93■□□□□ 0.78
CLN6-224ENST00000638076 RPS19P39019 145 aaKnown RBP19.93■□□□□ 0.78
CLN6-224ENST00000638076 PPM1FP49593 454 aaPredicted RBP19.93■□□□□ 0.78
CLN6-224ENST00000638076 PRKCDQ05655 676 aa19.93■□□□□ 0.78
CLN6-224ENST00000638076 DNASE1L3Q13609 305 aa19.93■□□□□ 0.78
CLN6-224ENST00000638076 ERV3-1Q14264 604 aa19.93■□□□□ 0.78
CLN6-224ENST00000638076 GKN2Q86XP6 184 aa19.93■□□□□ 0.78
CLN6-224ENST00000638076 RNF113BQ8IZP6 322 aaKnown RBP19.93■□□□□ 0.78
CLN6-224ENST00000638076 ZNF614Q8N883 585 aa19.93■□□□□ 0.78
CLN6-224ENST00000638076 OR4N2Q8NGD1 307 aa19.93■□□□□ 0.78
CLN6-224ENST00000638076 GATAD2BQ8WXI9 593 aa19.93■□□□□ 0.78
CLN6-224ENST00000638076 SLC38A3Q99624 504 aa19.93■□□□□ 0.78
CLN6-224ENST00000638076 KCNS3Q9BQ31 491 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms