RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 CHST2Q9Y4C5 530 aa14.17□□□□□ -0.14
CLN6-219ENST00000637329 ORC6Q9Y5N6 252 aa14.17□□□□□ -0.14
CLN6-219ENST00000637329 AP4B1Q9Y6B7 739 aa14.17□□□□□ -0.14
CLN6-219ENST00000637329 U3KQV3 271 aa14.17□□□□□ -0.14
CLN6-219ENST00000637329 ZFYVE26Q68DK2 2539 aa14.16□□□□□ -0.14
CLN6-219ENST00000637329 IGHV1-45A0A0A0MS14 117 aa14.16□□□□□ -0.14
CLN6-219ENST00000637329 TEX51A0A1B0GUA7 166 aa14.16□□□□□ -0.14
CLN6-219ENST00000637329 SPAARA0A1B0GVQ0 90 aa14.16□□□□□ -0.14
CLN6-219ENST00000637329 A0A1W2PRQ8 180 aa14.16□□□□□ -0.14
CLN6-219ENST00000637329 C7orf72A4D263 438 aa14.16□□□□□ -0.14
CLN6-219ENST00000637329 EIF4E1BA6NMX2 242 aaKnown RBP14.16□□□□□ -0.14
CLN6-219ENST00000637329 AP3D1O14617 1153 aa14.16□□□□□ -0.14
CLN6-219ENST00000637329 OXSR1O95747 527 aaPredicted RBP14.16□□□□□ -0.14
CLN6-219ENST00000637329 H1F0P07305 194 aaKnown RBP14.16□□□□□ -0.14
CLN6-219ENST00000637329 NGFRP08138 427 aa14.16□□□□□ -0.14
CLN6-219ENST00000637329 THRBP10828 461 aa14.16□□□□□ -0.14
CLN6-219ENST00000637329 MMP11P24347 488 aa14.16□□□□□ -0.14
CLN6-219ENST00000637329 RAD23AP54725 363 aa14.16□□□□□ -0.14
CLN6-219ENST00000637329 NRG3P56975 720 aa14.16□□□□□ -0.14
CLN6-219ENST00000637329 FOXL2P58012 376 aa14.16□□□□□ -0.14
CLN6-219ENST00000637329 PLCXD2Q0VAA5 305 aa14.16□□□□□ -0.14
CLN6-219ENST00000637329 DGCR6Q14129 220 aa14.16□□□□□ -0.14
CLN6-219ENST00000637329 FGFBP1Q14512 234 aa14.16□□□□□ -0.14
CLN6-219ENST00000637329 PCOLCEQ15113 449 aa14.16□□□□□ -0.14
CLN6-219ENST00000637329 NPTX1Q15818 432 aa14.16□□□□□ -0.14
CLN6-219ENST00000637329 EXT1Q16394 746 aa14.16□□□□□ -0.14
CLN6-219ENST00000637329 PDZK1Q5T2W1 519 aa14.16□□□□□ -0.14
CLN6-219ENST00000637329 FAHD1Q6P587 224 aa14.16□□□□□ -0.14
CLN6-219ENST00000637329 ZAR1Q86SH2 424 aa14.16□□□□□ -0.14
CLN6-219ENST00000637329 LACC1Q8IV20 430 aa14.16□□□□□ -0.14
CLN6-219ENST00000637329 LINC00471Q8N535 108 aa14.16□□□□□ -0.14
CLN6-219ENST00000637329 TOR1AIP2Q8NFQ8 470 aa14.16□□□□□ -0.14
CLN6-219ENST00000637329 OR5L2Q8NGL0 311 aa14.16□□□□□ -0.14
CLN6-219ENST00000637329 MAGEE2Q8TD90 523 aaPredicted RBP14.16□□□□□ -0.14
CLN6-219ENST00000637329 CT55Q8WUE5 264 aa14.16□□□□□ -0.14
CLN6-219ENST00000637329 UBQLN4Q9NRR5 601 aa14.16□□□□□ -0.14
CLN6-219ENST00000637329 ACER3Q9NUN7 267 aa14.16□□□□□ -0.14
CLN6-219ENST00000637329 FOXJ2Q9P0K8 574 aa14.16□□□□□ -0.14
CLN6-219ENST00000637329 KIF17Q9P2E2 1029 aa14.16□□□□□ -0.14
CLN6-219ENST00000637329 KCNE5Q9UJ90 142 aa14.16□□□□□ -0.14
CLN6-219ENST00000637329 ZNF223Q9UK11 482 aaPredicted RBP14.16□□□□□ -0.14
CLN6-219ENST00000637329 A4GNTQ9UNA3 340 aa14.16□□□□□ -0.14
CLN6-219ENST00000637329 SLC35A3Q9Y2D2 325 aa14.16□□□□□ -0.14
CLN6-219ENST00000637329 IGHV3-20A0A0C4DH32 117 aa14.15□□□□□ -0.14
CLN6-219ENST00000637329 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.15□□□□□ -0.14
CLN6-219ENST00000637329 H0YAE9 185 aa14.15□□□□□ -0.14
CLN6-219ENST00000637329 J3KTA2 159 aa14.15□□□□□ -0.14
CLN6-219ENST00000637329 DLGAP1O14490 977 aa14.15□□□□□ -0.14
CLN6-219ENST00000637329 FFAR1O14842 300 aa14.15□□□□□ -0.14
CLN6-219ENST00000637329 DENRO43583 198 aaKnown RBP14.15□□□□□ -0.14
CLN6-219ENST00000637329 HS6ST1O60243 411 aa14.15□□□□□ -0.14
CLN6-219ENST00000637329 ABCB7O75027 752 aa14.15□□□□□ -0.14
CLN6-219ENST00000637329 SEMA7AO75326 666 aa14.15□□□□□ -0.14
CLN6-219ENST00000637329 SEC24DO94855 1032 aaPredicted RBP14.15□□□□□ -0.14
CLN6-219ENST00000637329 OR5F1O95221 314 aa14.15□□□□□ -0.14
CLN6-219ENST00000637329 CDH2P19022 906 aaPredicted RBP14.15□□□□□ -0.14
CLN6-219ENST00000637329 IGFBP5P24593 272 aa14.15□□□□□ -0.14
CLN6-219ENST00000637329 IL12BP29460 328 aa14.15□□□□□ -0.14
CLN6-219ENST00000637329 ADH7P40394 386 aa14.15□□□□□ -0.14
CLN6-219ENST00000637329 STAT5AP42229 794 aa14.15□□□□□ -0.14
CLN6-219ENST00000637329 RFX3P48380 749 aa14.15□□□□□ -0.14
CLN6-219ENST00000637329 NOVA1P51513 510 aaKnown RBP14.15□□□□□ -0.14
CLN6-219ENST00000637329 TARDBPQ13148 414 aaKnown RBP eCLIP14.15□□□□□ -0.142e-43■■■■■ 32.4
CLN6-219ENST00000637329 MED21Q13503 144 aa14.15□□□□□ -0.14
CLN6-219ENST00000637329 MICAQ29983 383 aa14.15□□□□□ -0.14
CLN6-219ENST00000637329 NHSL2Q5HYW2 709 aa14.15□□□□□ -0.14
CLN6-219ENST00000637329 TBPL2Q6SJ96 375 aa14.15□□□□□ -0.14
CLN6-219ENST00000637329 IGF2-ASQ6U949 168 aa14.15□□□□□ -0.14
CLN6-219ENST00000637329 TIPARPQ7Z3E1 657 aaKnown RBP14.15□□□□□ -0.14
CLN6-219ENST00000637329 HMGN2P46Q86SG4 172 aa14.15□□□□□ -0.14
CLN6-219ENST00000637329 RBM45Q8IUH3 476 aaKnown RBP14.15□□□□□ -0.14
CLN6-219ENST00000637329 ZNF440Q8IYI8 595 aa14.15□□□□□ -0.14
CLN6-219ENST00000637329 NLGN4XQ8N0W4 816 aa14.15□□□□□ -0.14
CLN6-219ENST00000637329 GALNT15Q8N3T1 639 aa14.15□□□□□ -0.14
CLN6-219ENST00000637329 NLGN4YQ8NFZ3 816 aaPredicted RBP14.15□□□□□ -0.14
CLN6-219ENST00000637329 GIPC3Q8TF64 312 aa14.15□□□□□ -0.14
CLN6-219ENST00000637329 ZCCHC14Q8WYQ9 949 aaKnown RBP14.15□□□□□ -0.14
CLN6-219ENST00000637329 ZNF570Q96NI8 536 aa14.15□□□□□ -0.14
CLN6-219ENST00000637329 ADI1Q9BV57 179 aa14.15□□□□□ -0.14
CLN6-219ENST00000637329 GPR87Q9BY21 358 aa14.15□□□□□ -0.14
CLN6-219ENST00000637329 ANKRD60Q9BZ19 345 aa14.15□□□□□ -0.14
CLN6-219ENST00000637329 POLR1BQ9H9Y6 1135 aa14.15□□□□□ -0.14
CLN6-219ENST00000637329 NMNAT1Q9HAN9 279 aaPredicted RBP14.15□□□□□ -0.14
CLN6-219ENST00000637329 PDP1Q9P0J1 537 aaPredicted RBP14.15□□□□□ -0.14
CLN6-219ENST00000637329 TCFL5Q9UL49 500 aa14.15□□□□□ -0.14
CLN6-219ENST00000637329 TMCC3Q9ULS5 477 aa14.15□□□□□ -0.14
CLN6-219ENST00000637329 HS3ST3B1Q9Y662 390 aa14.15□□□□□ -0.14
CLN6-219ENST00000637329 NBEAQ8NFP9 2946 aa14.14□□□□□ -0.15
CLN6-219ENST00000637329 NPIPA5A0A0B4J1W7 369 aa14.14□□□□□ -0.15
CLN6-219ENST00000637329 TRBV11-1A0A0K0K1C0 115 aa14.14□□□□□ -0.15
CLN6-219ENST00000637329 A0A1W2PQD3 144 aa14.14□□□□□ -0.15
CLN6-219ENST00000637329 NPIPA7E9PJI5 369 aa14.14□□□□□ -0.15
CLN6-219ENST00000637329 STMND1H3BQB6 276 aa14.14□□□□□ -0.15
CLN6-219ENST00000637329 FAAHO00519 579 aa14.14□□□□□ -0.15
CLN6-219ENST00000637329 TSPAN2O60636 221 aa14.14□□□□□ -0.15
CLN6-219ENST00000637329 ZFAND5O76080 213 aa14.14□□□□□ -0.15
CLN6-219ENST00000637329 TNFSF15O95150 251 aa14.14□□□□□ -0.15
CLN6-219ENST00000637329 NPIPA8P0DM63 369 aa14.14□□□□□ -0.15
CLN6-219ENST00000637329 COX6A1P12074 109 aa14.14□□□□□ -0.15
CLN6-219ENST00000637329 ANXA8P13928 327 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms