RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	SPCS3	P61009	180 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	ACTR1A	P61163	376 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	RPS27A	P62979	156 aa	Known RBP	10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	UBA52	P62987	128 aa	Known RBP	10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	SELENOW	P63302	87 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	MLLT1	Q03111	559 aa	Predicted RBP	10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	TAP2	Q03519	686 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	ILK	Q13418	452 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	GTF2H2	Q13888	395 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	PTPRR	Q15256	657 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	SLC30A6	Q6NXT4	461 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	GTF2H2C	Q6P1K8	395 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	SBSN	Q6UWP8	590 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	BAIAP2L2	Q6UXY1	529 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	OAF	Q86UD1	273 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	TOMM5	Q8N4H5	51 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	ZNF527	Q8NB42	609 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	OR52I1	Q8NGK6	324 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	OR8J1	Q8NGP2	316 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	OR6K3	Q8NGY3	331 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	OR14A16	Q8NHC5	309 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	CPNE4	Q96A23	557 aa	Predicted RBP	10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	MS4A3	Q96HJ5	214 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	C12orf66	Q96MD2	445 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	ENKD1	Q9H0I2	346 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	MTG2	Q9H4K7	406 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	OPA3	Q9H6K4	179 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	RNF122	Q9H9V4	155 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	FGF20	Q9NP95	211 aa	Predicted RBP	10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	PRMT8	Q9NR22	394 aa	Predicted RBP	10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	NANS	Q9NR45	359 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	KLHL1	Q9NR64	748 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	SLC22A11	Q9NSA0	550 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	TREM2	Q9NZC2	230 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	TRPS1	Q9UHF7	1281 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	EXOSC1	Q9Y3B2	195 aa	Known RBP	10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	DNAH12	Q6ZR08	3092 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	PLXNA2	O75051	1894 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	PLXNB3	Q9ULL4	1909 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	IGLV3-16	A0A075B6K0	115 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	TSPAN11	A1L157	253 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	POM121C	A8CG34	1229 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	FFAR3	O14843	346 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	T	O15178	435 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	SLC16A5	O15375	505 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	GPR42	O15529	346 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	EEF1E1	O43324	174 aa	Known RBP	10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	BNIP3L	O60238	219 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	FZD7	O75084	574 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	PAK4	O96013	591 aa	Predicted RBP	10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	ADH1C	P00326	375 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	HLA-DPB1	P04440	258 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	ANXA5	P08758	320 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	BCKDHA	P12694	445 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	OSM	P13725	252 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	ACPP	P15309	386 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	CDKN2C	P42773	168 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	CDH12	P55289	794 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	CAV3	P56539	151 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	STARD6	P59095	220 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	PITPNA	Q00169	270 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	FABP5	Q01469	135 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	DEFA6	Q01524	100 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	SMCO1	Q147U7	214 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	OR2B11	Q5JQS5	317 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	ATAT1	Q5SQI0	421 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	PLEKHS1	Q5SXH7	462 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	C10orf91	Q5T1B1	145 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	SFRP5	Q5T4F7	317 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	GPRC6A	Q5T6X5	926 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	FAM69A	Q5T7M9	428 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	PRAMEF13	Q5VWM6	474 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	ZNF660	Q6AZW8	331 aa	Predicted RBP	10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	LIN54	Q6MZP7	749 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	FAM180B	Q6P0A1	224 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	C3orf33	Q6P1S2	294 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	LYPD4	Q6UWN0	246 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	DEF8	Q6ZN54	512 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	LRRC70	Q7Z2Q7	622 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	MARCH9	Q86YJ5	346 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	GPR135	Q8IZ08	494 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	OR6V1	Q8N148	313 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	ZNF687	Q8N1G0	1237 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	L3MBTL4	Q8NA19	623 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	SYT14	Q8NB59	555 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	TMEM203	Q969S6	136 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	EID2B	Q96D98	161 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	MOGAT1	Q96PD6	335 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	DMRTA2	Q96SC8	542 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	EXOSC3	Q9NQT5	275 aa	Known RBP	10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	OR6C2	Q9NZP2	312 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	AKAP7	Q9P0M2	348 aa	Predicted RBP	10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	MGAT4C	Q9UBM8	478 aa		10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	METTL1	Q9UBP6	276 aa	Known RBP	10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	MRTO4	Q9UKD2	239 aa	Known RBP	10.09	□□□□□ -0.79
CHD2-223	ENST00000636306	TRBV23-1	A0A0A0MS06	115 aa		10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	RHPN2P1	A8MT19	583 aa		10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	UPK3BL1	B0FP48	263 aa		10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	UPK3BL2	E5RIL1	263 aa		10.08	□□□□□ -0.8
CHD2-223	ENST00000636306	C5orf67	F2Z3F1	127 aa		10.08	□□□□□ -0.8

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