RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 OR2B3O76000 313 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 CD6P30203 668 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 FJX1Q86VR8 437 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 SMG8Q8ND04 991 aaKnown RBP5.72□□□□□ -1.49
SCN1A-212ENST00000636194 GOT1L1Q8NHS2 421 aaPredicted RBP5.72□□□□□ -1.49
SCN1A-212ENST00000636194 GPR174Q9BXC1 333 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 PCED1AQ9H1Q7 454 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 SLC38A1Q9H2H9 487 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 POT1Q9NUX5 634 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 FKBPLQ9UIM3 349 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 EMC9Q9Y3B6 208 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 ABCA9Q8IUA7 1624 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 SETD1AO15047 1707 aaKnown RBP5.72□□□□□ -1.49
SCN1A-212ENST00000636194 BLACEA4D250 179 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 BUD23O43709 281 aaKnown RBP5.72□□□□□ -1.49
SCN1A-212ENST00000636194 CSDE1O75534 798 aaKnown RBP5.72□□□□□ -1.49
SCN1A-212ENST00000636194 OR8U8P0C7N1 319 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 RAB6AP20340 208 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 PBX2P40425 430 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 HYAL2Q12891 473 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 SLAMF1Q13291 335 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 UGT8Q16880 541 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 ACTBL2Q562R1 376 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 ZNF34Q8IZ26 560 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 PACRGLQ8N7B6 248 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 SFXN2Q96NB2 322 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 NECTIN4Q96NY8 510 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 OCSTAMPQ9BR26 566 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 TIMM8AO60220 97 aaPredicted RBP5.71□□□□□ -1.49
SCN1A-212ENST00000636194 S100A8P05109 93 aa5.71□□□□□ -1.49
SCN1A-212ENST00000636194 RAB9AP51151 201 aa5.71□□□□□ -1.49
SCN1A-212ENST00000636194 MTPNP58546 118 aa5.71□□□□□ -1.49
SCN1A-212ENST00000636194 METTL11BQ5VVY1 283 aa5.71□□□□□ -1.49
SCN1A-212ENST00000636194 PRICKLE2Q7Z3G6 844 aa5.71□□□□□ -1.49
SCN1A-212ENST00000636194 SLC7A13Q8TCU3 470 aa5.71□□□□□ -1.49
SCN1A-212ENST00000636194 IL1F10Q8WWZ1 152 aa5.71□□□□□ -1.49
SCN1A-212ENST00000636194 ASB11Q8WXH4 323 aa5.71□□□□□ -1.49
SCN1A-212ENST00000636194 HLA-CQ95604 372 aa5.71□□□□□ -1.49
SCN1A-212ENST00000636194 ZDHHC16Q969W1 377 aa5.71□□□□□ -1.49
SCN1A-212ENST00000636194 PYCR2Q96C36 320 aa5.71□□□□□ -1.49
SCN1A-212ENST00000636194 PRRC1Q96M27 445 aa5.71□□□□□ -1.49
SCN1A-212ENST00000636194 RBM24Q9BX46 236 aaKnown RBP5.71□□□□□ -1.49
SCN1A-212ENST00000636194 ZNF160Q9HCG1 818 aa5.71□□□□□ -1.49
SCN1A-212ENST00000636194 TLR9Q9NR96 1032 aa5.71□□□□□ -1.49
SCN1A-212ENST00000636194 CLCF1Q9UBD9 225 aa5.71□□□□□ -1.49
SCN1A-212ENST00000636194 SLC7A7Q9UM01 511 aa5.71□□□□□ -1.49
SCN1A-212ENST00000636194 ARHGEF5Q12774 1597 aa5.71□□□□□ -1.49
SCN1A-212ENST00000636194 ZCWPW2A0A1B0GU75 182 aa5.71□□□□□ -1.49
SCN1A-212ENST00000636194 LOC100130705A0A1B0GUX0 176 aa5.71□□□□□ -1.49
SCN1A-212ENST00000636194 MEIOCA2RUB1 952 aa5.71□□□□□ -1.49
SCN1A-212ENST00000636194 ENPP3O14638 875 aa5.71□□□□□ -1.49
SCN1A-212ENST00000636194 GIFP27352 417 aa5.71□□□□□ -1.49
SCN1A-212ENST00000636194 ZNF816Q0VGE8 651 aaPredicted RBP5.71□□□□□ -1.49
SCN1A-212ENST00000636194 OR5I1Q13606 314 aa5.71□□□□□ -1.49
SCN1A-212ENST00000636194 TCTE1Q5JU00 501 aa5.71□□□□□ -1.49
SCN1A-212ENST00000636194 EMC10Q5UCC4 262 aa5.71□□□□□ -1.49
SCN1A-212ENST00000636194 GK5Q6ZS86 529 aa5.71□□□□□ -1.49
SCN1A-212ENST00000636194 PIGZQ86VD9 579 aa5.71□□□□□ -1.49
SCN1A-212ENST00000636194 HSD17B11Q8NBQ5 300 aa5.71□□□□□ -1.49
SCN1A-212ENST00000636194 OR7G3Q8NG95 312 aa5.71□□□□□ -1.49
SCN1A-212ENST00000636194 NFKBIDQ8NI38 313 aa5.71□□□□□ -1.49
SCN1A-212ENST00000636194 CNTNAP3Q9BZ76 1288 aa5.71□□□□□ -1.49
SCN1A-212ENST00000636194 MAF1Q9H063 256 aa5.71□□□□□ -1.49
SCN1A-212ENST00000636194 CHRDQ9H2X0 955 aa5.71□□□□□ -1.49
SCN1A-212ENST00000636194 PRDM12Q9H4Q4 367 aa5.71□□□□□ -1.49
SCN1A-212ENST00000636194 TAS2R16Q9NYV7 291 aa5.71□□□□□ -1.49
SCN1A-212ENST00000636194 ZIM2Q9NZV7 527 aa5.71□□□□□ -1.49
SCN1A-212ENST00000636194 DVL2O14641 736 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 RNASE1P07998 156 aaKnown RBP5.71□□□□□ -1.5
SCN1A-212ENST00000636194 RPS17P08708 135 aaKnown RBP5.71□□□□□ -1.5
SCN1A-212ENST00000636194 CDK4P11802 303 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 TACR2P21452 398 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 CD52P31358 61 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 TNFSF8P32971 234 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 CDC34P49427 236 aaPredicted RBP5.71□□□□□ -1.5
SCN1A-212ENST00000636194 INCA1Q0VD86 236 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 DUSP7Q16829 419 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 TMIGD1Q6UXZ0 262 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 SCGB1D4Q6XE38 83 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 C1orf87Q8N0U7 546 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 RAB7BQ96AH8 199 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 TOE1Q96GM8 510 aaKnown RBP5.71□□□□□ -1.5
SCN1A-212ENST00000636194 SHARPINQ9H0F6 387 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 SIAEQ9HAT2 523 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 GJB4Q9NTQ9 266 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 UNC119BA6NIH7 251 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 SNX3O60493 162 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 EDNRBP24530 442 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 BPIFB3P59826 476 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 ZNF763Q0D2J5 394 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 NPY5RQ15761 445 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 TATDN3Q17R31 274 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 FKBP1CQ5VVH2 108 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 MBD3L1Q8WWY6 194 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 STON2Q8WXE9 905 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 CD244Q9BZW8 370 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 OR51I1Q9H343 314 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 AGPAT4Q9NRZ5 378 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 B3GNT3Q9Y2A9 372 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 ZC3H13Q5T200 1668 aaKnown RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms