RNA–Protein interactions for RNA: ENST00000624032.3

ATRX-213, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 3,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-213ENST00000624032 ING3Q9NXR8 418 aa10.8□□□□□ -0.68
ATRX-213ENST00000624032 CLEC2DQ9UHP7 191 aa10.8□□□□□ -0.68
ATRX-213ENST00000624032 C1orf226A1L170 272 aa10.79□□□□□ -0.68
ATRX-213ENST00000624032 PCDH17O14917 1159 aa10.79□□□□□ -0.68
ATRX-213ENST00000624032 ENTPD6O75354 484 aa10.79□□□□□ -0.68
ATRX-213ENST00000624032 IL1AP01583 271 aa10.79□□□□□ -0.68
ATRX-213ENST00000624032 POU1F1P28069 291 aa10.79□□□□□ -0.68
ATRX-213ENST00000624032 TIA1P31483 386 aaKnown RBP eCLIP10.79□□□□□ -0.68
ATRX-213ENST00000624032 VSX2P58304 361 aaPredicted RBP10.79□□□□□ -0.68
ATRX-213ENST00000624032 CCL7P80098 99 aa10.79□□□□□ -0.68
ATRX-213ENST00000624032 HNRNPA0Q13151 305 aaKnown RBP10.79□□□□□ -0.68
ATRX-213ENST00000624032 KCNAB1Q14722 419 aa10.79□□□□□ -0.68
ATRX-213ENST00000624032 SPIN4Q56A73 249 aa10.79□□□□□ -0.68
ATRX-213ENST00000624032 MEDAGQ5VYS4 303 aa10.79□□□□□ -0.68
ATRX-213ENST00000624032 ASPGQ86U10 573 aa10.79□□□□□ -0.68
ATRX-213ENST00000624032 MMP21Q8N119 569 aa10.79□□□□□ -0.68
ATRX-213ENST00000624032 CLDN22Q8N7P3 220 aa10.79□□□□□ -0.68
ATRX-213ENST00000624032 AQP11Q8NBQ7 271 aa10.79□□□□□ -0.68
ATRX-213ENST00000624032 ZCCHC10Q8TBK6 192 aa10.79□□□□□ -0.68
ATRX-213ENST00000624032 KIAA1143Q96AT1 154 aaPredicted RBP10.79□□□□□ -0.68
ATRX-213ENST00000624032 MS4A6EQ96DS6 147 aa10.79□□□□□ -0.68
ATRX-213ENST00000624032 TMEM80Q96HE8 168 aa10.79□□□□□ -0.68
ATRX-213ENST00000624032 IL4I1Q96RQ9 567 aa10.79□□□□□ -0.68
ATRX-213ENST00000624032 POLR2J2Q9GZM3 115 aaKnown RBP10.79□□□□□ -0.68
ATRX-213ENST00000624032 SLC25A19Q9HC21 320 aa10.79□□□□□ -0.68
ATRX-213ENST00000624032 SH3BP4Q9P0V3 963 aa10.79□□□□□ -0.68
ATRX-213ENST00000624032 BTNL2Q9UIR0 455 aa10.79□□□□□ -0.68
ATRX-213ENST00000624032 ERI3O43414 337 aaKnown RBP10.79□□□□□ -0.68
ATRX-213ENST00000624032 AKR7A2O43488 359 aa10.79□□□□□ -0.68
ATRX-213ENST00000624032 CBLP22681 906 aa10.79□□□□□ -0.68
ATRX-213ENST00000624032 BSGP35613 385 aa10.79□□□□□ -0.68
ATRX-213ENST00000624032 GPR3P46089 330 aa10.79□□□□□ -0.68
ATRX-213ENST00000624032 AP2S1P53680 142 aaPredicted RBP10.79□□□□□ -0.68
ATRX-213ENST00000624032 MC1RQ01726 317 aa10.79□□□□□ -0.68
ATRX-213ENST00000624032 CPTPQ5TA50 214 aa10.79□□□□□ -0.68
ATRX-213ENST00000624032 ANGPTL8Q6UXH0 198 aa10.79□□□□□ -0.68
ATRX-213ENST00000624032 IDO2Q6ZQW0 420 aa10.79□□□□□ -0.68
ATRX-213ENST00000624032 IQCF2Q8IXL9 164 aa10.79□□□□□ -0.68
ATRX-213ENST00000624032 SHISA5Q8N114 240 aa10.79□□□□□ -0.68
ATRX-213ENST00000624032 TTLQ8NG68 377 aa10.79□□□□□ -0.68
ATRX-213ENST00000624032 TEFMQ96QE5 360 aaKnown RBP10.79□□□□□ -0.68
ATRX-213ENST00000624032 PIP5K1AQ99755 562 aa10.79□□□□□ -0.68
ATRX-213ENST00000624032 CCDC3Q9BQI4 270 aa10.79□□□□□ -0.68
ATRX-213ENST00000624032 TRAF4Q9BUZ4 470 aaPredicted RBP10.79□□□□□ -0.68
ATRX-213ENST00000624032 C1GALT1Q9NS00 363 aa10.79□□□□□ -0.68
ATRX-213ENST00000624032 ACER3Q9NUN7 267 aa10.79□□□□□ -0.68
ATRX-213ENST00000624032 MRPS2Q9Y399 296 aaKnown RBP10.79□□□□□ -0.68
ATRX-213ENST00000624032 ALG5Q9Y673 324 aa10.79□□□□□ -0.68
ATRX-213ENST00000624032 ASCC3Q8N3C0 2202 aaKnown RBP10.79□□□□□ -0.68
ATRX-213ENST00000624032 J3KTA2 159 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 WWP2O00308 870 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 SCAMP2O15127 329 aaKnown RBP10.78□□□□□ -0.68
ATRX-213ENST00000624032 SHOXO15266 292 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 DUX1O43812 170 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 TPST2O60704 377 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 GADD45GO95257 159 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 UBL4AP11441 157 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 CRATP43155 626 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 MAP2K3P46734 347 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 NUBP1P53384 320 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 C21orf58P58505 322 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 SNRPD2P62316 118 aaKnown RBP10.78□□□□□ -0.68
ATRX-213ENST00000624032 GAB1Q13480 694 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 C1DQ13901 141 aaKnown RBP10.78□□□□□ -0.68
ATRX-213ENST00000624032 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.78□□□□□ -0.683e-6■■■■□ 20.2
ATRX-213ENST00000624032 KLHL17Q6TDP4 642 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 HSDL2Q6YN16 418 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 ZNF793Q6ZN11 406 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 NATD1Q8N6N6 113 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 NLGN4YQ8NFZ3 816 aaPredicted RBP10.78□□□□□ -0.68
ATRX-213ENST00000624032 OR4M1Q8NGD0 313 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 RGMAQ96B86 450 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 ZDHHC12Q96GR4 267 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 SOHLH2Q9NX45 425 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 A0A1W2PQM1 296 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 CDX4O14627 284 aaPredicted RBP10.78□□□□□ -0.68
ATRX-213ENST00000624032 PROM1O43490 865 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 UQCRC1P31930 480 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 MLLT11Q13015 90 aaPredicted RBP10.78□□□□□ -0.68
ATRX-213ENST00000624032 NCF4Q15080 339 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 ANXA8L1Q5VT79 327 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 LIPKQ5VXJ0 399 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 MZT2BQ6NZ67 158 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 RNF44Q7L0R7 432 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 C19orf18Q8NEA5 215 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 OR8K5Q8NH50 307 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 IFI44Q8TCB0 444 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 GEMIN6Q8WXD5 167 aaKnown RBP10.78□□□□□ -0.68
ATRX-213ENST00000624032 UCN3Q969E3 161 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 TM4SF19Q96DZ7 209 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 TRIM45Q9H8W5 580 aaPredicted RBP10.78□□□□□ -0.68
ATRX-213ENST00000624032 PLEKHB1Q9UF11 243 aaPredicted RBP10.78□□□□□ -0.68
ATRX-213ENST00000624032 EXO1Q9UQ84 846 aaKnown RBP10.78□□□□□ -0.68
ATRX-213ENST00000624032 HSPB11Q9Y547 144 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 TLCD2A6NGC4 264 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 PRAMEF25A6NGN4 478 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 GABRR3A8MPY1 467 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 TMPRSS11DO60235 418 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 DNAJB6O75190 326 aa10.78□□□□□ -0.68
ATRX-213ENST00000624032 ZNF888P0CJ79 500 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms