RNA–Protein interactions for RNA: ENST00000621747.5

VEGFA-229, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-229ENST00000621747 SLC22A20A6NK97 555 aa22.76■■□□□ 1.23
VEGFA-229ENST00000621747 ESPNB1AK53 854 aa22.76■■□□□ 1.23
VEGFA-229ENST00000621747 H3BML4 177 aa22.76■■□□□ 1.23
VEGFA-229ENST00000621747 SCDO00767 359 aa22.76■■□□□ 1.23
VEGFA-229ENST00000621747 GMFGO60234 142 aa22.76■■□□□ 1.23
VEGFA-229ENST00000621747 CTAG2O75638 210 aa22.76■■□□□ 1.23
VEGFA-229ENST00000621747 SOX30O94993 753 aa22.76■■□□□ 1.23
VEGFA-229ENST00000621747 KRT16P08779 473 aa22.76■■□□□ 1.23
VEGFA-229ENST00000621747 DHRS4L1P0CG22 281 aa22.76■■□□□ 1.23
VEGFA-229ENST00000621747 G6PDP11413 515 aa22.76■■□□□ 1.23
VEGFA-229ENST00000621747 CPA2P48052 419 aa22.76■■□□□ 1.23
VEGFA-229ENST00000621747 CCT3P49368 545 aaKnown RBP22.76■■□□□ 1.23
VEGFA-229ENST00000621747 CDC73Q6P1J9 531 aa22.76■■□□□ 1.23
VEGFA-229ENST00000621747 MISPQ8IVT2 679 aa22.76■■□□□ 1.23
VEGFA-229ENST00000621747 RIMKLAQ8IXN7 391 aa22.76■■□□□ 1.23
VEGFA-229ENST00000621747 OR5M1Q8NGP8 315 aa22.76■■□□□ 1.23
VEGFA-229ENST00000621747 MOAP1Q96BY2 351 aa22.76■■□□□ 1.23
VEGFA-229ENST00000621747 OTUB1Q96FW1 271 aaPredicted RBP22.76■■□□□ 1.23
VEGFA-229ENST00000621747 DUSP26Q9BV47 211 aa22.76■■□□□ 1.23
VEGFA-229ENST00000621747 RBM24Q9BX46 236 aaKnown RBP22.76■■□□□ 1.23
VEGFA-229ENST00000621747 PIGUQ9H490 435 aa22.76■■□□□ 1.23
VEGFA-229ENST00000621747 KCNK9Q9NPC2 374 aa22.76■■□□□ 1.23
VEGFA-229ENST00000621747 STOML1Q9UBI4 398 aa22.76■■□□□ 1.23
VEGFA-229ENST00000621747 FAF1Q9UNN5 650 aaPredicted RBP22.76■■□□□ 1.23
VEGFA-229ENST00000621747 AP4B1Q9Y6B7 739 aa22.76■■□□□ 1.23
VEGFA-229ENST00000621747 AKAP9Q99996 3911 aa22.76■■□□□ 1.23
VEGFA-229ENST00000621747 MED12Q93074 2177 aa22.75■■□□□ 1.23
VEGFA-229ENST00000621747 A0A087WZY1 265 aa22.75■■□□□ 1.23
VEGFA-229ENST00000621747 TUBAL3A6NHL2 446 aa22.75■■□□□ 1.23
VEGFA-229ENST00000621747 SEC14L5O43304 696 aa22.75■■□□□ 1.23
VEGFA-229ENST00000621747 C6orf47O95873 294 aa22.75■■□□□ 1.23
VEGFA-229ENST00000621747 TGM6O95932 706 aa22.75■■□□□ 1.23
VEGFA-229ENST00000621747 CRHP06850 196 aa22.75■■□□□ 1.23
VEGFA-229ENST00000621747 SLC1A6P48664 564 aa22.75■■□□□ 1.23
VEGFA-229ENST00000621747 C21orf58P58505 322 aa22.75■■□□□ 1.23
VEGFA-229ENST00000621747 TP53BP2Q13625 1128 aa22.75■■□□□ 1.23
VEGFA-229ENST00000621747 TNFAIP8L3Q5GJ75 292 aa22.75■■□□□ 1.23
VEGFA-229ENST00000621747 ZAR1Q86SH2 424 aa22.75■■□□□ 1.23
VEGFA-229ENST00000621747 LUZP2Q86TE4 346 aa22.75■■□□□ 1.23
VEGFA-229ENST00000621747 SFXN5Q8TD22 340 aa22.75■■□□□ 1.23
VEGFA-229ENST00000621747 POLDIP3Q9BY77 421 aaKnown RBP22.75■■□□□ 1.23
VEGFA-229ENST00000621747 ACTRT3Q9BYD9 372 aa22.75■■□□□ 1.23
VEGFA-229ENST00000621747 CXorf36Q9H7Y0 433 aa22.75■■□□□ 1.23
VEGFA-229ENST00000621747 ZNF395Q9H8N7 513 aaPredicted RBP22.75■■□□□ 1.23
VEGFA-229ENST00000621747 PACSIN3Q9UKS6 424 aa22.75■■□□□ 1.23
VEGFA-229ENST00000621747 DOCK7Q96N67 2140 aa22.75■■□□□ 1.23
VEGFA-229ENST00000621747 TACC2O95359 2948 aa22.74■■□□□ 1.23
VEGFA-229ENST00000621747 CFLARO15519 480 aa22.74■■□□□ 1.23
VEGFA-229ENST00000621747 TNFRSF21O75509 655 aa22.74■■□□□ 1.23
VEGFA-229ENST00000621747 ZNF17P17021 662 aa22.74■■□□□ 1.23
VEGFA-229ENST00000621747 ATP6V1C1P21283 382 aa22.74■■□□□ 1.23
VEGFA-229ENST00000621747 RPL14P50914 215 aaKnown RBP22.74■■□□□ 1.23
VEGFA-229ENST00000621747 CLDN8P56748 225 aa22.74■■□□□ 1.23
VEGFA-229ENST00000621747 RPS3AP61247 264 aaKnown RBP22.74■■□□□ 1.23
VEGFA-229ENST00000621747 CCNJQ5T5M9 372 aa22.74■■□□□ 1.23
VEGFA-229ENST00000621747 CAMKMTQ7Z624 323 aa22.74■■□□□ 1.23
VEGFA-229ENST00000621747 GATSQ8NAP1 163 aa22.74■■□□□ 1.23
VEGFA-229ENST00000621747 ADAMTS15Q8TE58 950 aa22.74■■□□□ 1.23
VEGFA-229ENST00000621747 SMPDL3BQ92485 455 aa22.74■■□□□ 1.23
VEGFA-229ENST00000621747 CDS1Q92903 461 aa22.74■■□□□ 1.23
VEGFA-229ENST00000621747 PGM2Q96G03 612 aa22.74■■□□□ 1.23
VEGFA-229ENST00000621747 PPP1R36Q96LQ0 422 aa22.74■■□□□ 1.23
VEGFA-229ENST00000621747 GPATCH1Q9BRR8 931 aaKnown RBP22.74■■□□□ 1.23
VEGFA-229ENST00000621747 AKTIPQ9H8T0 292 aa22.74■■□□□ 1.23
VEGFA-229ENST00000621747 FBXO34Q9NWN3 711 aa22.74■■□□□ 1.23
VEGFA-229ENST00000621747 VDAC3Q9Y277 283 aa22.74■■□□□ 1.23
VEGFA-229ENST00000621747 A0A1W2PNV4 684 aa22.73■■□□□ 1.23
VEGFA-229ENST00000621747 A0A1W2PQD3 144 aa22.73■■□□□ 1.23
VEGFA-229ENST00000621747 A6NNC1 897 aa22.73■■□□□ 1.23
VEGFA-229ENST00000621747 SUCLG1P53597 346 aaKnown RBP22.73■■□□□ 1.23
VEGFA-229ENST00000621747 CLDN15P56746 228 aa22.73■■□□□ 1.23
VEGFA-229ENST00000621747 OCRLQ01968 901 aa22.73■■□□□ 1.23
VEGFA-229ENST00000621747 TMEM44Q2T9K0 475 aa22.73■■□□□ 1.23
VEGFA-229ENST00000621747 PGS1Q32NB8 556 aa22.73■■□□□ 1.23
VEGFA-229ENST00000621747 BHLHB9Q6PI77 547 aa22.73■■□□□ 1.23
VEGFA-229ENST00000621747 NUDT8Q8WV74 236 aa22.73■■□□□ 1.23
VEGFA-229ENST00000621747 PINK1Q9BXM7 581 aa22.73■■□□□ 1.23
VEGFA-229ENST00000621747 CLEC4MQ9H2X3 399 aaPredicted RBP22.73■■□□□ 1.23
VEGFA-229ENST00000621747 RASSF1Q9NS23 344 aa22.73■■□□□ 1.23
VEGFA-229ENST00000621747 ZNF175Q9Y473 711 aa22.73■■□□□ 1.23
VEGFA-229ENST00000621747 TNFSF12-TNFSF13A0A0A6YY99 330 aa22.72■■□□□ 1.23
VEGFA-229ENST00000621747 FAM221AA4D161 298 aa22.72■■□□□ 1.23
VEGFA-229ENST00000621747 H0YC42 278 aa22.72■■□□□ 1.23
VEGFA-229ENST00000621747 TNFSF13O75888 250 aa22.72■■□□□ 1.23
VEGFA-229ENST00000621747 EPXP11678 715 aa22.72■■□□□ 1.23
VEGFA-229ENST00000621747 BGNP21810 368 aa22.72■■□□□ 1.23
VEGFA-229ENST00000621747 ZNF41P51814 821 aaPredicted RBP22.72■■□□□ 1.23
VEGFA-229ENST00000621747 TPD52P55327 224 aaPredicted RBP22.72■■□□□ 1.23
VEGFA-229ENST00000621747 CLDN20P56880 219 aa22.72■■□□□ 1.23
VEGFA-229ENST00000621747 STX3Q13277 289 aa22.72■■□□□ 1.23
VEGFA-229ENST00000621747 DAZAP2Q15038 168 aaPredicted RBP22.72■■□□□ 1.23
VEGFA-229ENST00000621747 METTL25Q8N6Q8 603 aa22.72■■□□□ 1.23
VEGFA-229ENST00000621747 ZNF527Q8NB42 609 aa22.72■■□□□ 1.23
VEGFA-229ENST00000621747 ACTRT2Q8TDY3 377 aa22.72■■□□□ 1.23
VEGFA-229ENST00000621747 ZBTB8AQ96BR9 441 aa22.72■■□□□ 1.23
VEGFA-229ENST00000621747 C20orf27Q9GZN8 174 aa22.72■■□□□ 1.23
VEGFA-229ENST00000621747 HOXD1Q9GZZ0 328 aa22.72■■□□□ 1.23
VEGFA-229ENST00000621747 GPATCH2Q9NW75 528 aa22.72■■□□□ 1.23
VEGFA-229ENST00000621747 GALNT8Q9NY28 637 aa22.72■■□□□ 1.23
VEGFA-229ENST00000621747 SHISA8B8ZZ34 492 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms