RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 MITD1Q8WV92 249 aa3.32□□□□□ -1.88
LRRC39-204ENST00000620882 TMEM37Q8WXS4 190 aa3.32□□□□□ -1.88
LRRC39-204ENST00000620882 FAM122AQ96E09 287 aa3.32□□□□□ -1.88
LRRC39-204ENST00000620882 SCRN2Q96FV2 425 aa3.32□□□□□ -1.88
LRRC39-204ENST00000620882 MED30Q96HR3 178 aa3.32□□□□□ -1.88
LRRC39-204ENST00000620882 ELMO2Q96JJ3 720 aa3.32□□□□□ -1.88
LRRC39-204ENST00000620882 C12orf42Q96LP6 360 aa3.32□□□□□ -1.88
LRRC39-204ENST00000620882 GPA33Q99795 319 aa3.32□□□□□ -1.88
LRRC39-204ENST00000620882 KCNS3Q9BQ31 491 aa3.32□□□□□ -1.88
LRRC39-204ENST00000620882 PKIBQ9C010 78 aa3.32□□□□□ -1.88
LRRC39-204ENST00000620882 S100A14Q9HCY8 104 aa3.32□□□□□ -1.88
LRRC39-204ENST00000620882 GDF3Q9NR23 364 aa3.32□□□□□ -1.88
LRRC39-204ENST00000620882 LCMT1Q9UIC8 334 aa3.32□□□□□ -1.88
LRRC39-204ENST00000620882 CHMP2BQ9UQN3 213 aa3.32□□□□□ -1.88
LRRC39-204ENST00000620882 CFL2Q9Y281 166 aa3.32□□□□□ -1.88
LRRC39-204ENST00000620882 ZNF175Q9Y473 711 aa3.32□□□□□ -1.88
LRRC39-204ENST00000620882 TRAV26-1A0A087WT03 109 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 FBLL1A6NHQ2 334 aaKnown RBP3.31□□□□□ -1.88
LRRC39-204ENST00000620882 YJEFN3A6XGL0 299 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 PRR23D1E9PI22 279 aaPredicted RBP3.31□□□□□ -1.88
LRRC39-204ENST00000620882 E9PQ18 207 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 P2RY10O00398 339 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 SULT1B1O43704 296 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 CALUO43852 315 aaPredicted RBP3.31□□□□□ -1.88
LRRC39-204ENST00000620882 TRMUO75648 421 aaKnown RBP3.31□□□□□ -1.88
LRRC39-204ENST00000620882 CABYRO75952 493 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 SCELO95171 688 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 KRT6AP02538 564 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 VTNP04004 478 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 LYNP07948 512 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 HIST1H2AGP0C0S8 130 aaPredicted RBP3.31□□□□□ -1.88
LRRC39-204ENST00000620882 PRR23D2P0DMB1 279 aaPredicted RBP3.31□□□□□ -1.88
LRRC39-204ENST00000620882 MAT2AP31153 395 aaKnown RBP3.31□□□□□ -1.88
LRRC39-204ENST00000620882 CYLC1P35663 651 aaPredicted RBP3.31□□□□□ -1.88
LRRC39-204ENST00000620882 FEN1P39748 380 aaKnown RBP3.31□□□□□ -1.88
LRRC39-204ENST00000620882 CDKN2AP42771 156 aaKnown RBP3.31□□□□□ -1.88
LRRC39-204ENST00000620882 STK19P49842 368 aaPredicted RBP3.31□□□□□ -1.88
LRRC39-204ENST00000620882 LINC01547P58512 204 aaPredicted RBP3.31□□□□□ -1.88
LRRC39-204ENST00000620882 VBP1P61758 197 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 RPL23AP62750 156 aaKnown RBP3.31□□□□□ -1.88
LRRC39-204ENST00000620882 TNNC1P63316 161 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 FGL1Q08830 312 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 ITPK1Q13572 414 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 MTF1Q14872 753 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 ANGPT1Q15389 498 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 TMEM52BQ4KMG9 183 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 TCHHL1Q5QJ38 904 aaPredicted RBP3.31□□□□□ -1.88
LRRC39-204ENST00000620882 ATP1A1-AS1Q5TC04 95 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 GPR157Q5UAW9 335 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 HIST2H2AA3Q6FI13 130 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 PTRHD1Q6GMV3 140 aaKnown RBP3.31□□□□□ -1.88
LRRC39-204ENST00000620882 Q6ZRG5 221 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 C19orf35Q6ZS72 473 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 LUZP2Q86TE4 346 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 LINC00523Q86TU6 105 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 NFE4Q86UQ8 179 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.31□□□□□ -1.88
LRRC39-204ENST00000620882 SLC38A6Q8IZM9 456 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 FGFRL1Q8N441 504 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 NECAB1Q8N987 351 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 MLKLQ8NB16 471 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 TTLQ8NG68 377 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 GLYATL2Q8WU03 294 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 HIST1H2ACQ93077 130 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 PPP1R14BQ96C90 147 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 PPP1R16AQ96I34 528 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 TSSK3Q96PN8 268 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 OVOL2Q9BRP0 275 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 CNPY3Q9BT09 278 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 FICDQ9BVA6 458 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 TSGA10Q9BZW7 698 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 LYRM4Q9HD34 91 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 FKBP14Q9NWM8 211 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 SLC6A5Q9Y345 797 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 A0A1B0GUH1 482 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 NPIPA2E9PIF3 369 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 GOLGA8RI6L899 631 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 POLR1CO15160 346 aaPredicted RBP3.31□□□□□ -1.88
LRRC39-204ENST00000620882 NBR2O15453 112 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 KDELR3O43731 214 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 SH3BGRLO75368 114 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 TRIM3O75382 744 aaPredicted RBP3.31□□□□□ -1.88
LRRC39-204ENST00000620882 CRTAPO75718 401 aaPredicted RBP3.31□□□□□ -1.88
LRRC39-204ENST00000620882 ZNF189O75820 626 aaPredicted RBP3.31□□□□□ -1.88
LRRC39-204ENST00000620882 ANXA9O76027 345 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 MYO1DO94832 1006 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 GSTA2P09210 222 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 CEBPBP17676 345 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 HMGA2P52926 109 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 ART1P52961 327 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 RAG2P55895 527 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 STX17P56962 302 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 ARPC4P59998 168 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 LRRC63Q05C16 580 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 PMS2P3Q13401 168 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 THEM4Q5T1C6 240 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 PDZK1Q5T2W1 519 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 STEAP1BQ6NZ63 245 aa3.31□□□□□ -1.88
LRRC39-204ENST00000620882 RNASEKQ6P5S7 137 aaKnown RBP3.31□□□□□ -1.88
LRRC39-204ENST00000620882 BLOC1S2Q6QNY1 142 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms