RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 CXorf36Q9H7Y0 433 aa15.48■□□□□ 0.07
HMGN3-203ENST00000620514 GALNT8Q9NY28 637 aa15.48■□□□□ 0.07
HMGN3-203ENST00000620514 VDAC3Q9Y277 283 aa15.48■□□□□ 0.07
HMGN3-203ENST00000620514 MPDZO75970 2070 aa15.47■□□□□ 0.07
HMGN3-203ENST00000620514 SLC22A20A6NK97 555 aa15.47■□□□□ 0.07
HMGN3-203ENST00000620514 NDUFB5O43674 189 aa15.47■□□□□ 0.07
HMGN3-203ENST00000620514 C6orf47O95873 294 aa15.47■□□□□ 0.07
HMGN3-203ENST00000620514 SERPINE1P05121 402 aa15.47■□□□□ 0.07
HMGN3-203ENST00000620514 NGFRP08138 427 aa15.47■□□□□ 0.07
HMGN3-203ENST00000620514 G6PDP11413 515 aa15.47■□□□□ 0.07
HMGN3-203ENST00000620514 DDX5P17844 614 aaKnown RBP15.47■□□□□ 0.07
HMGN3-203ENST00000620514 CPA2P48052 419 aa15.47■□□□□ 0.07
HMGN3-203ENST00000620514 MPP2Q14168 576 aa15.47■□□□□ 0.07
HMGN3-203ENST00000620514 PDCD2Q16342 344 aaPredicted RBP15.47■□□□□ 0.07
HMGN3-203ENST00000620514 TMEM44Q2T9K0 475 aa15.47■□□□□ 0.07
HMGN3-203ENST00000620514 GLYR1Q49A26 553 aaPredicted RBP15.47■□□□□ 0.07
HMGN3-203ENST00000620514 RIMKLAQ8IXN7 391 aa15.47■□□□□ 0.07
HMGN3-203ENST00000620514 COQ8BQ96D53 544 aa15.47■□□□□ 0.07
HMGN3-203ENST00000620514 ZNF845Q96IR2 970 aaPredicted RBP15.47■□□□□ 0.07
HMGN3-203ENST00000620514 PINK1Q9BXM7 581 aa15.47■□□□□ 0.07
HMGN3-203ENST00000620514 C20orf27Q9GZN8 174 aa15.47■□□□□ 0.07
HMGN3-203ENST00000620514 RAB21Q9UL25 225 aa15.47■□□□□ 0.07
HMGN3-203ENST00000620514 KCNE3Q9Y6H6 103 aa15.47■□□□□ 0.07
HMGN3-203ENST00000620514 AKAP6Q13023 2319 aa15.46■□□□□ 0.07
HMGN3-203ENST00000620514 DHRS4L1P0CG22 281 aa15.46■□□□□ 0.07
HMGN3-203ENST00000620514 EPXP11678 715 aa15.46■□□□□ 0.07
HMGN3-203ENST00000620514 CCT3P49368 545 aaKnown RBP15.46■□□□□ 0.07
HMGN3-203ENST00000620514 RNF144AP50876 292 aaPredicted RBP15.46■□□□□ 0.07
HMGN3-203ENST00000620514 ABCE1P61221 599 aaKnown RBP15.46■□□□□ 0.07
HMGN3-203ENST00000620514 POU6F2P78424 691 aaPredicted RBP15.46■□□□□ 0.07
HMGN3-203ENST00000620514 SORDQ00796 357 aa15.46■□□□□ 0.07
HMGN3-203ENST00000620514 TP53BP2Q13625 1128 aa15.46■□□□□ 0.07
HMGN3-203ENST00000620514 DAZAP2Q15038 168 aaPredicted RBP15.46■□□□□ 0.07
HMGN3-203ENST00000620514 CD226Q15762 336 aa15.46■□□□□ 0.07
HMGN3-203ENST00000620514 CEP85LQ5SZL2 805 aa15.46■□□□□ 0.07
HMGN3-203ENST00000620514 VWA1Q6PCB0 445 aa15.46■□□□□ 0.07
HMGN3-203ENST00000620514 CDC20BQ86Y33 519 aa15.46■□□□□ 0.07
HMGN3-203ENST00000620514 GOT1L1Q8NHS2 421 aaPredicted RBP15.46■□□□□ 0.07
HMGN3-203ENST00000620514 PSMA8Q8TAA3 256 aa15.46■□□□□ 0.07
HMGN3-203ENST00000620514 SH3YL1Q96HL8 342 aaPredicted RBP15.46■□□□□ 0.07
HMGN3-203ENST00000620514 ZIM3Q96PE6 472 aa15.46■□□□□ 0.07
HMGN3-203ENST00000620514 BTBD2Q9BX70 525 aa15.46■□□□□ 0.07
HMGN3-203ENST00000620514 ACBD3Q9H3P7 528 aa15.46■□□□□ 0.07
HMGN3-203ENST00000620514 CENPHQ9H3R5 247 aa15.46■□□□□ 0.07
HMGN3-203ENST00000620514 PIGMQ9H3S5 423 aa15.46■□□□□ 0.07
HMGN3-203ENST00000620514 PIGUQ9H490 435 aa15.46■□□□□ 0.07
HMGN3-203ENST00000620514 SSU72Q9NP77 194 aaKnown RBP15.46■□□□□ 0.07
HMGN3-203ENST00000620514 UBQLN4Q9NRR5 601 aa15.46■□□□□ 0.07
HMGN3-203ENST00000620514 ATAD3AQ9NVI7 634 aa15.46■□□□□ 0.07
HMGN3-203ENST00000620514 GPATCH2Q9NW75 528 aa15.46■□□□□ 0.07
HMGN3-203ENST00000620514 GIN1Q9NXP7 522 aa15.46■□□□□ 0.07
HMGN3-203ENST00000620514 PACSIN3Q9UKS6 424 aa15.46■□□□□ 0.07
HMGN3-203ENST00000620514 EIF3LQ9Y262 564 aaKnown RBP15.46■□□□□ 0.07
HMGN3-203ENST00000620514 HIVEP1P15822 2718 aa15.45■□□□□ 0.06
HMGN3-203ENST00000620514 NPIPA5A0A0B4J1W7 369 aa15.45■□□□□ 0.06
HMGN3-203ENST00000620514 A8MXE2 369 aa15.45■□□□□ 0.06
HMGN3-203ENST00000620514 NPIPA7E9PJI5 369 aa15.45■□□□□ 0.06
HMGN3-203ENST00000620514 LINC01387J3KSC0 135 aa15.45■□□□□ 0.06
HMGN3-203ENST00000620514 BIRC5O15392 142 aa15.45■□□□□ 0.06
HMGN3-203ENST00000620514 TNFRSF21O75509 655 aa15.45■□□□□ 0.06
HMGN3-203ENST00000620514 NPIPA8P0DM63 369 aa15.45■□□□□ 0.06
HMGN3-203ENST00000620514 PRPS1L1P21108 318 aa15.45■□□□□ 0.06
HMGN3-203ENST00000620514 ART1P52961 327 aa15.45■□□□□ 0.06
HMGN3-203ENST00000620514 IST1P53990 364 aa15.45■□□□□ 0.06
HMGN3-203ENST00000620514 EEFSECP57772 596 aaKnown RBP15.45■□□□□ 0.06
HMGN3-203ENST00000620514 SIRPAP78324 504 aa15.45■□□□□ 0.06
HMGN3-203ENST00000620514 EMX2Q04743 252 aa15.45■□□□□ 0.06
HMGN3-203ENST00000620514 PON3Q15166 354 aa15.45■□□□□ 0.06
HMGN3-203ENST00000620514 SPDYE7PQ495Y7 208 aa15.45■□□□□ 0.06
HMGN3-203ENST00000620514 TNFAIP8L3Q5GJ75 292 aa15.45■□□□□ 0.06
HMGN3-203ENST00000620514 CDC73Q6P1J9 531 aa15.45■□□□□ 0.06
HMGN3-203ENST00000620514 GGNQ86UU5 652 aa15.45■□□□□ 0.06
HMGN3-203ENST00000620514 CNEP1R1Q8N9A8 125 aa15.45■□□□□ 0.06
HMGN3-203ENST00000620514 OR5AK3PQ8NH89 298 aa15.45■□□□□ 0.06
HMGN3-203ENST00000620514 FNDC9Q8TBE3 224 aa15.45■□□□□ 0.06
HMGN3-203ENST00000620514 STARD4Q96DR4 205 aa15.45■□□□□ 0.06
HMGN3-203ENST00000620514 STACQ99469 402 aa15.45■□□□□ 0.06
HMGN3-203ENST00000620514 SORT1Q99523 831 aa15.45■□□□□ 0.06
HMGN3-203ENST00000620514 PRPF18Q99633 342 aaKnown RBP15.45■□□□□ 0.06
HMGN3-203ENST00000620514 DUSP26Q9BV47 211 aa15.45■□□□□ 0.06
HMGN3-203ENST00000620514 ACTRT3Q9BYD9 372 aa15.45■□□□□ 0.06
HMGN3-203ENST00000620514 AKTIPQ9H8T0 292 aa15.45■□□□□ 0.06
HMGN3-203ENST00000620514 DUSP22Q9NRW4 184 aa15.45■□□□□ 0.06
HMGN3-203ENST00000620514 AP4B1Q9Y6B7 739 aa15.45■□□□□ 0.06
HMGN3-203ENST00000620514 NUP214P35658 2090 aaPredicted RBP15.44■□□□□ 0.06
HMGN3-203ENST00000620514 SCDO00767 359 aa15.44■□□□□ 0.06
HMGN3-203ENST00000620514 TM9SF1O15321 606 aa15.44■□□□□ 0.06
HMGN3-203ENST00000620514 CFLARO15519 480 aa15.44■□□□□ 0.06
HMGN3-203ENST00000620514 SMNDC1O75940 238 aaKnown RBP eCLIP15.44■□□□□ 0.06
HMGN3-203ENST00000620514 OPN1LWP04000 364 aa15.44■□□□□ 0.06
HMGN3-203ENST00000620514 HPGDP15428 266 aa15.44■□□□□ 0.06
HMGN3-203ENST00000620514 BGNP21810 368 aa15.44■□□□□ 0.06
HMGN3-203ENST00000620514 LCN1P31025 176 aa15.44■□□□□ 0.06
HMGN3-203ENST00000620514 CPOXP36551 454 aa15.44■□□□□ 0.06
HMGN3-203ENST00000620514 KIR2DL2P43627 348 aaPredicted RBP15.44■□□□□ 0.06
HMGN3-203ENST00000620514 CLDN8P56748 225 aa15.44■□□□□ 0.06
HMGN3-203ENST00000620514 HBA1P69905 142 aa15.44■□□□□ 0.06
HMGN3-203ENST00000620514 PGS1Q32NB8 556 aa15.44■□□□□ 0.06
HMGN3-203ENST00000620514 LSM12Q3MHD2 195 aaKnown RBP15.44■□□□□ 0.06
HMGN3-203ENST00000620514 OR2A2Q6IF42 318 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms