RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 DOK1Q99704 481 aa11.77□□□□□ -0.53
TNFAIP3-209ENST00000619035 CTRCQ99895 268 aa11.77□□□□□ -0.53
TNFAIP3-209ENST00000619035 FUNDC2Q9BWH2 189 aa11.77□□□□□ -0.53
TNFAIP3-209ENST00000619035 APMAPQ9HDC9 416 aa11.77□□□□□ -0.53
TNFAIP3-209ENST00000619035 TPRKBQ9Y3C4 175 aa11.77□□□□□ -0.53
TNFAIP3-209ENST00000619035 KMT2EQ8IZD2 1858 aa11.77□□□□□ -0.53
TNFAIP3-209ENST00000619035 TTC28Q96AY4 2481 aa11.77□□□□□ -0.53
TNFAIP3-209ENST00000619035 A0A1W2PRQ8 180 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 FAM86C2PA6NEL3 165 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 D6RAR5 112 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 FAAHO00519 579 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 GALR2O43603 387 aaPredicted RBP11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 GDF9O60383 454 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 IGKV1D-16P01601 117 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 GUSBP08236 651 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 HBQ1P09105 142 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 ZNF182P17025 639 aaPredicted RBP11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 C21orf33P30042 268 aaPredicted RBP11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 TTKP33981 857 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 TRHRP34981 398 aaPredicted RBP11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 NUP107P57740 925 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 EEF1A1P68104 462 aaKnown RBP11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 RHAGQ02094 409 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 OCA2Q04671 838 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 EIPR1Q53HC9 387 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 MRPL2Q5T653 305 aaKnown RBP11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 ZNF615Q8N8J6 731 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 ARSGQ96EG1 525 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 MCHR1Q99705 422 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 VN1R1Q9GZP7 353 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 OCEL1Q9H607 264 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 MKKSQ9NPJ1 570 aaPredicted RBP11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 C11orf16Q9NQ32 467 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 MAN2C1Q9NTJ4 1040 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 OCIAD1Q9NX40 245 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 COL5A1P20908 1838 aaPredicted RBP11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 IGKV3D-11A0A0A0MRZ8 115 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 SH3PXD2BA1X283 911 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 NTN3O00634 580 aaPredicted RBP11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 FLRT2O43155 660 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 THBS1P07996 1170 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 GKN3PP0CG01 181 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 CDK4P11802 303 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 NID1P14543 1247 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 CHMP24386 653 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 CSTF2P33240 577 aaKnown RBP eCLIP11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 RPS6KA3P51812 740 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 TARDBPQ13148 414 aaKnown RBP eCLIP11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 ENTPD8Q5MY95 495 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 PDZK1Q5T2W1 519 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 PPP1R3BQ86XI6 285 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 P3H2Q8IVL5 708 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 ZNF420Q8TAQ5 688 aaPredicted RBP11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 SAP130Q9H0E3 1048 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 POLE3Q9NRF9 147 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 SLC22A11Q9NSA0 550 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 SEMA4GQ9NTN9 838 aa11.76□□□□□ -0.53
TNFAIP3-209ENST00000619035 SEC16AO15027 2179 aa11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 LNP1A1A4G5 178 aa11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 ARRDC5A6NEK1 342 aa11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 EFCAB7A8K855 629 aa11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 ZNF99A8MXY4 864 aaPredicted RBP11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 RGS10O43665 173 aa11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 OXSR1O95747 527 aaPredicted RBP11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 LDOC1O95751 146 aaPredicted RBP11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 CLPSP04118 112 aa11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 LCKP06239 509 aa11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 CT45A8P0DMV1 189 aa11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 CT45A9P0DMV2 189 aa11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 ITIH1P19827 911 aa11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 PTNP21246 168 aa11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 RPS4Y1P22090 263 aaKnown RBP11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 IFNA8P32881 189 aa11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 UGT2B15P54855 530 aa11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 CXCR4P61073 352 aa11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 AQP6Q13520 282 aa11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 CCDC157Q569K6 752 aa11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 CT45A2Q5DJT8 189 aa11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 LANCL3Q6ZV70 420 aa11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 COX15Q7KZN9 410 aa11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 SLITRK4Q8IW52 837 aa11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 OR4K5Q8NGD3 323 aa11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 RHOXF1Q8NHV9 184 aa11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 SLC2A12Q8TD20 617 aa11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 RHBDD1Q8TEB9 315 aa11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 PSD2Q9BQI7 771 aa11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 GPR83Q9NYM4 423 aa11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 PRODH2Q9UF12 536 aa11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 CBLCQ9ULV8 474 aa11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 TCRBV16S1A1N1A0A5B0 115 aa11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 ZNF701M0R085 212 aaPredicted RBP11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 BCAS1O75363 584 aaPredicted RBP11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 PRG2P13727 222 aa11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 ACP1P24666 158 aa11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 PSMB9P28065 219 aa11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 SLC37A1P57057 533 aa11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 LSM3P62310 102 aaKnown RBP11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 ELAVL1Q15717 326 aaKnown RBP11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 NKAIN1Q4KMZ8 207 aa11.75□□□□□ -0.53
TNFAIP3-209ENST00000619035 PGBD2Q6P3X8 592 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms