RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-223	ENST00000618944	CSF2	P04141	144 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	CD8B	P10966	210 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	CPM	P14384	443 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	ZNF24	P17028	368 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	NDUFV2	P19404	249 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	NDUFS1	P28331	727 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	GABRA5	P31644	462 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	GCGR	P47871	477 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	NFATC4	Q14934	902 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	EXOSC7	Q15024	291 aa	Known RBP	10.43	□□□□□ -0.74
TP53-223	ENST00000618944	ARHGAP11B	Q3KRB8	267 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	GLYR1	Q49A26	553 aa	Predicted RBP	10.43	□□□□□ -0.74
TP53-223	ENST00000618944	ZNF542P	Q5EBM4	170 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	PDZK1	Q5T2W1	519 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	AGAP6	Q5VW22	663 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	FCRLB	Q6BAA4	426 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	WDR88	Q6ZMY6	472 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	UBE2Q1	Q7Z7E8	422 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	GATAD2A	Q86YP4	633 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	KLB	Q86Z14	1044 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	TRIM48	Q8IWZ4	208 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	GJD3	Q8N144	294 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	CLDN22	Q8N7P3	220 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	OR2T33	Q8NG76	320 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	RFK	Q969G6	155 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	SLC22A18	Q96BI1	424 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	TM4SF19	Q96DZ7	209 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	WDR92	Q96MX6	357 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	WDFY2	Q96P53	400 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	AGAP4	Q96P64	663 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	TEX12	Q9BXU0	123 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	PRRG3	Q9BZD7	231 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	NKX2-4	Q9H2Z4	354 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	UBQLN3	Q9H347	655 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	ISG20L2	Q9H9L3	353 aa	Known RBP	10.43	□□□□□ -0.74
TP53-223	ENST00000618944	HINT3	Q9NQE9	182 aa	Known RBP	10.43	□□□□□ -0.74
TP53-223	ENST00000618944	C20orf141	Q9NUB4	165 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	ACTR10	Q9NZ32	417 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	NCKAP1	Q9Y2A7	1128 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	SLC35F4	A4IF30	521 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944		H0YGG7	62 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	DVL2	O14641	736 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	KLF4	O43474	513 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	FGF17	O60258	216 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	OR5F1	O95221	314 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	ZGLP1	P0C6A0	271 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	ATXN8OS	P0DMR3	200 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	SMIM10L1	P0DMW3	83 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	MAK	P20794	623 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	HTR2A	P28223	471 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	LSS	P48449	732 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	ZNF136	P52737	540 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	ARF3	P61204	181 aa	Predicted RBP	10.43	□□□□□ -0.74
TP53-223	ENST00000618944	COPZ1	P61923	177 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	EEF1A1	P68104	462 aa	Known RBP	10.43	□□□□□ -0.74
TP53-223	ENST00000618944	ZNF155	Q12901	538 aa	Predicted RBP	10.43	□□□□□ -0.74
TP53-223	ENST00000618944	SF3B4	Q15427	424 aa	Known RBP eCLIP	10.43	□□□□□ -0.74
TP53-223	ENST00000618944	CCDC92	Q53HC0	331 aa	Predicted RBP	10.43	□□□□□ -0.74
TP53-223	ENST00000618944	DDI2	Q5TDH0	399 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	ZNF761	Q86XN6	746 aa	Predicted RBP	10.43	□□□□□ -0.74
TP53-223	ENST00000618944	MARCH9	Q86YJ5	346 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	UBQLNL	Q8IYU4	475 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	POGLUT1	Q8NBL1	392 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	ZNF485	Q8NCK3	441 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	CAPSL	Q8WWF8	208 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	FAM3C	Q92520	227 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	NR4A3	Q92570	626 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	SMIM10	Q96HG1	83 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	MSLNL	Q96KJ4	702 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	GABRG3	Q99928	467 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	PHF11	Q9UIL8	331 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	KCNE5	Q9UJ90	142 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	PCDHGB2	Q9Y5G2	931 aa		10.43	□□□□□ -0.74
TP53-223	ENST00000618944	SCN2A	Q99250	2005 aa		10.42	□□□□□ -0.74
TP53-223	ENST00000618944	SHISA3	A0PJX4	238 aa		10.42	□□□□□ -0.74
TP53-223	ENST00000618944	CSF3	P09919	207 aa		10.42	□□□□□ -0.74
TP53-223	ENST00000618944	HTR3A	P46098	478 aa		10.42	□□□□□ -0.74
TP53-223	ENST00000618944	LBX1	P52954	281 aa		10.42	□□□□□ -0.74
TP53-223	ENST00000618944	HYAL1	Q12794	435 aa		10.42	□□□□□ -0.74
TP53-223	ENST00000618944	SRSF5	Q13243	272 aa	Known RBP	10.42	□□□□□ -0.74
TP53-223	ENST00000618944	DSG2	Q14126	1118 aa		10.42	□□□□□ -0.74
TP53-223	ENST00000618944	KIR2DS3	Q14952	304 aa		10.42	□□□□□ -0.74
TP53-223	ENST00000618944	OR1Q1	Q15612	314 aa		10.42	□□□□□ -0.74
TP53-223	ENST00000618944	MRPL2	Q5T653	305 aa	Known RBP	10.42	□□□□□ -0.74
TP53-223	ENST00000618944	ZNF517	Q6ZMY9	492 aa	Predicted RBP	10.42	□□□□□ -0.74
TP53-223	ENST00000618944	KLHL36	Q8N4N3	616 aa		10.42	□□□□□ -0.74
TP53-223	ENST00000618944	SIRT6	Q8N6T7	355 aa		10.42	□□□□□ -0.74
TP53-223	ENST00000618944	SMAP2	Q8WU79	429 aa	Predicted RBP	10.42	□□□□□ -0.74
TP53-223	ENST00000618944	PRSS27	Q9BQR3	290 aa		10.42	□□□□□ -0.74
TP53-223	ENST00000618944	ANKRD19P	Q9H560	264 aa		10.42	□□□□□ -0.74
TP53-223	ENST00000618944	TNFRSF10D	Q9UBN6	386 aa		10.42	□□□□□ -0.74
TP53-223	ENST00000618944	SLC22A7	Q9Y694	548 aa		10.42	□□□□□ -0.74
TP53-223	ENST00000618944	UNC119B	A6NIH7	251 aa		10.42	□□□□□ -0.74
TP53-223	ENST00000618944	HR	O43593	1189 aa		10.42	□□□□□ -0.74
TP53-223	ENST00000618944	HYAL3	O43820	417 aa	Predicted RBP	10.42	□□□□□ -0.74
TP53-223	ENST00000618944	HPGDS	O60760	199 aa		10.42	□□□□□ -0.74
TP53-223	ENST00000618944	REM1	O75628	298 aa		10.42	□□□□□ -0.74
TP53-223	ENST00000618944	KRT8	P05787	483 aa		10.42	□□□□□ -0.74
TP53-223	ENST00000618944	IFI30	P13284	250 aa		10.42	□□□□□ -0.74
TP53-223	ENST00000618944	APEX1	P27695	318 aa	Known RBP	10.42	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms