RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 PADI3Q9ULW8 664 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 EMC9Q9Y3B6 208 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 UGT2A1Q9Y4X1 527 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 SIPA1L3O60292 1781 aaPredicted RBP3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 UBA6A0AVT1 1052 aaPredicted RBP3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 C7orf72A4D263 438 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 SAC3D1A6NKF1 404 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 A8MU76 341 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 A8MUI8 341 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 DLGAP1O14490 977 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 ZBTB5O15062 677 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 SIGLEC5O15389 551 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 MFAP3LO75121 409 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 GLP2RO95838 553 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 SCG5P05408 212 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 PNMTP11086 282 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 SNRPBP14678 240 aaKnown RBP3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 ZNF30P17039 623 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 BGNP21810 368 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 ARNTP27540 789 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 KIR3DL1P43629 444 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 DNA2P51530 1060 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 AKR1D1P51857 326 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 KPNA2P52292 529 aaKnown RBP3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 VLDLRP98155 873 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 BNIP2Q12982 314 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 TDGQ13569 410 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 KRR1Q13601 381 aaKnown RBP3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 GPNMBQ14956 572 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 PTGES3Q15185 160 aaKnown RBP3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 CALCRLQ16602 461 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 ASTE1Q2TB18 679 aaPredicted RBP3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 SLC36A2Q495M3 483 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 CTSL3PQ5NE16 218 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 LCE2CQ5TA81 110 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 PRAMEF13Q5VWM6 474 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 SCARA3Q6AZY7 606 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 KIAA0930Q6ICG6 404 aaPredicted RBP3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 GRINAQ7Z429 371 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 NRMQ8IXM6 262 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 UBQLNLQ8IYU4 475 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 C9orf62Q8N4C0 152 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 MARVELD2Q8N4S9 558 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 C4orf32Q8N8J7 132 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 TTC16Q8NEE8 873 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 WDR36Q8NI36 951 aaKnown RBP3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 NUDCD2Q8WVJ2 157 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 NSMAFQ92636 917 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 TM4SF19Q96DZ7 209 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 SLC35A4Q96G79 324 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 COQ2Q96H96 371 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 PRMT6Q96LA8 375 aaPredicted RBP3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 ROPN1Q9HAT0 212 aaPredicted RBP3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 PAK6Q9NQU5 681 aaPredicted RBP3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 C1orf109Q9NX04 203 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 IMPACTQ9P2X3 320 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 PCDHA2Q9Y5H9 948 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 TSSC4Q9Y5U2 329 aaPredicted RBP3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 A0A096LPE4 126 aa3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 A0A1W2PPZ6 126 aa3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 TMEM8BA6NDV4 472 aa3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 NEMP2A6NFY4 417 aa3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 E7EWF7 191 aa3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 KLF11O14901 512 aa3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 SELENOFO60613 162 aa3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 CLEC3AO75596 197 aa3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 VAPBO95292 243 aa3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 ADAP00813 363 aa3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 IFNA21P01568 189 aa3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 G6PDP11413 515 aa3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 GABRA1P14867 456 aa3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 NTSR1P30989 418 aa3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 PBX1P40424 430 aa3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 PTTG1IPP53801 180 aa3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 ERVK11-1P61568 191 aa3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 EFNB1P98172 346 aa3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 PAX5Q02548 391 aa3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 RBPJQ06330 500 aa3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 SRSF1Q07955 248 aaKnown RBP eCLIP3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 ORC2Q13416 577 aaPredicted RBP3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 KCNJ11Q14654 390 aa3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 EXT1Q16394 746 aa3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 RBBP7Q16576 425 aa3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 ZNF766Q5HY98 468 aa3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 H3F3CQ6NXT2 135 aa3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 DENND1BQ6P3S1 775 aa3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 PIGWQ7Z7B1 504 aa3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 BHLHE22Q8NFJ8 381 aaPredicted RBP3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 OR5T3Q8NGG3 340 aa3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 ITFG1Q8TB96 612 aa3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 SEMA4DQ92854 862 aa3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 SLC35C1Q96A29 364 aa3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 ULK4Q96C45 1275 aa3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 RAX2Q96IS3 184 aa3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 HARBI1Q96MB7 349 aa3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 MRPS26Q9BYN8 205 aaKnown RBP3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 FZD8Q9H461 694 aa3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 ACTL8Q9H568 366 aa3.79□□□□□ -1.8
UBE2D3-233ENST00000618836 LMAN1LQ9HAT1 526 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms