RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 RAB39AQ14964 217 aa13□□□□□ -0.33
CIITA-213ENST00000618327 TMEM236Q5W0B7 351 aa13□□□□□ -0.33
CIITA-213ENST00000618327 GALNTL5Q7Z4T8 443 aa13□□□□□ -0.33
CIITA-213ENST00000618327 GPAT4Q86UL3 456 aa13□□□□□ -0.33
CIITA-213ENST00000618327 CENPSQ8N2Z9 138 aa13□□□□□ -0.33
CIITA-213ENST00000618327 DRAXINQ8NBI3 349 aaPredicted RBP13□□□□□ -0.33
CIITA-213ENST00000618327 PSD4Q8NDX1 1056 aa13□□□□□ -0.33
CIITA-213ENST00000618327 ADOQ96SZ5 270 aa13□□□□□ -0.33
CIITA-213ENST00000618327 RDH8Q9NYR8 311 aa13□□□□□ -0.33
CIITA-213ENST00000618327 ISPDA4D126 451 aa13□□□□□ -0.33
CIITA-213ENST00000618327 PLOD2O00469 737 aa13□□□□□ -0.33
CIITA-213ENST00000618327 DCKP27707 260 aa13□□□□□ -0.33
CIITA-213ENST00000618327 TRIM23P36406 574 aa13□□□□□ -0.33
CIITA-213ENST00000618327 LIM2P55344 173 aa13□□□□□ -0.33
CIITA-213ENST00000618327 RPS3AP61247 264 aaKnown RBP13□□□□□ -0.33
CIITA-213ENST00000618327 SLC3A1Q07837 685 aa13□□□□□ -0.33
CIITA-213ENST00000618327 ZNF404Q494X3 552 aa13□□□□□ -0.33
CIITA-213ENST00000618327 PAMR1Q6UXH9 720 aa13□□□□□ -0.33
CIITA-213ENST00000618327 DNAJA4Q8WW22 397 aaPredicted RBP13□□□□□ -0.33
CIITA-213ENST00000618327 TMED9Q9BVK6 235 aa13□□□□□ -0.33
CIITA-213ENST00000618327 DDX31Q9H8H2 851 aaKnown RBP13□□□□□ -0.33
CIITA-213ENST00000618327 ZNF225Q9UK10 706 aa13□□□□□ -0.33
CIITA-213ENST00000618327 ANXA2P2A6NMY6 339 aa13□□□□□ -0.33
CIITA-213ENST00000618327 TMPRSS11DO60235 418 aa13□□□□□ -0.33
CIITA-213ENST00000618327 ANXA2P07355 339 aaKnown RBP13□□□□□ -0.33
CIITA-213ENST00000618327 MRPL3P09001 348 aaKnown RBP13□□□□□ -0.33
CIITA-213ENST00000618327 GSTT2BP0CG30 244 aa13□□□□□ -0.33
CIITA-213ENST00000618327 GABARAPL2P60520 117 aa13□□□□□ -0.33
CIITA-213ENST00000618327 PITPNAQ00169 270 aa13□□□□□ -0.33
CIITA-213ENST00000618327 ASB18Q6ZVZ8 466 aa13□□□□□ -0.33
CIITA-213ENST00000618327 CD93Q9NPY3 652 aa13□□□□□ -0.33
CIITA-213ENST00000618327 IL20RAQ9UHF4 553 aa13□□□□□ -0.33
CIITA-213ENST00000618327 ZNF443Q9Y2A4 671 aaPredicted RBP13□□□□□ -0.33
CIITA-213ENST00000618327 VSTM2BA6NLU5 285 aa13□□□□□ -0.33
CIITA-213ENST00000618327 TMX2-CTNND1H3BSU7 103 aa13□□□□□ -0.33
CIITA-213ENST00000618327 MT-ND5P03915 603 aa13□□□□□ -0.33
CIITA-213ENST00000618327 AP2S1P53680 142 aaPredicted RBP13□□□□□ -0.33
CIITA-213ENST00000618327 VLDLRP98155 873 aa13□□□□□ -0.33
CIITA-213ENST00000618327 GAB1Q13480 694 aa13□□□□□ -0.33
CIITA-213ENST00000618327 ARHGAP11AQ6P4F7 1023 aa13□□□□□ -0.33
CIITA-213ENST00000618327 LINGO2Q7L985 606 aa13□□□□□ -0.33
CIITA-213ENST00000618327 IQCF1Q8N6M8 205 aa13□□□□□ -0.33
CIITA-213ENST00000618327 BAHD1Q8TBE0 780 aaPredicted RBP13□□□□□ -0.33
CIITA-213ENST00000618327 ADAMTS16Q8TE57 1224 aa13□□□□□ -0.33
CIITA-213ENST00000618327 ASB15Q8WXK1 588 aa13□□□□□ -0.33
CIITA-213ENST00000618327 COQ8BQ96D53 544 aa13□□□□□ -0.33
CIITA-213ENST00000618327 SECISBP2Q96T21 854 aaKnown RBP13□□□□□ -0.33
CIITA-213ENST00000618327 SLC39A1Q9NY26 324 aa13□□□□□ -0.33
CIITA-213ENST00000618327 MGAT4AQ9UM21 535 aa13□□□□□ -0.33
CIITA-213ENST00000618327 DAPP1Q9UN19 280 aa13□□□□□ -0.33
CIITA-213ENST00000618327 A0A075B6Q4 140 aa12.99□□□□□ -0.33
CIITA-213ENST00000618327 PROM1O43490 865 aa12.99□□□□□ -0.33
CIITA-213ENST00000618327 CKMT1AP12532 417 aa12.99□□□□□ -0.33
CIITA-213ENST00000618327 KEAP1Q14145 624 aa12.99□□□□□ -0.33
CIITA-213ENST00000618327 GFOD2Q3B7J2 385 aa12.99□□□□□ -0.33
CIITA-213ENST00000618327 NCCRP1Q6ZVX7 275 aaPredicted RBP12.99□□□□□ -0.33
CIITA-213ENST00000618327 GPALPP1Q8IXQ4 340 aa12.99□□□□□ -0.33
CIITA-213ENST00000618327 TMEM102Q8N9M5 508 aaPredicted RBP12.99□□□□□ -0.33
CIITA-213ENST00000618327 TMEM239Q8WW34 195 aa12.99□□□□□ -0.33
CIITA-213ENST00000618327 ELP4Q96EB1 424 aa12.99□□□□□ -0.33
CIITA-213ENST00000618327 OR6C1Q96RD1 312 aa12.99□□□□□ -0.33
CIITA-213ENST00000618327 DPH1Q9BZG8 443 aa12.99□□□□□ -0.33
CIITA-213ENST00000618327 TMEM38AQ9H6F2 299 aa12.99□□□□□ -0.33
CIITA-213ENST00000618327 LYRM4Q9HD34 91 aa12.99□□□□□ -0.33
CIITA-213ENST00000618327 GNG8Q9UK08 70 aa12.99□□□□□ -0.33
CIITA-213ENST00000618327 SLC35A3Q9Y2D2 325 aa12.99□□□□□ -0.33
CIITA-213ENST00000618327 EFCAB7A8K855 629 aa12.99□□□□□ -0.33
CIITA-213ENST00000618327 DNAJB5O75953 348 aa12.99□□□□□ -0.33
CIITA-213ENST00000618327 CPNE6O95741 557 aa12.99□□□□□ -0.33
CIITA-213ENST00000618327 SLC35E2P0CK97 266 aa12.99□□□□□ -0.33
CIITA-213ENST00000618327 ST6GAL1P15907 406 aa12.99□□□□□ -0.33
CIITA-213ENST00000618327 GPR19Q15760 415 aa12.99□□□□□ -0.33
CIITA-213ENST00000618327 GTF2IRD2BQ6EKJ0 949 aa12.99□□□□□ -0.33
CIITA-213ENST00000618327 GTF2IRD2Q86UP8 949 aa12.99□□□□□ -0.33
CIITA-213ENST00000618327 FBXL6Q8N531 539 aa12.99□□□□□ -0.33
CIITA-213ENST00000618327 ZNF420Q8TAQ5 688 aaPredicted RBP12.99□□□□□ -0.33
CIITA-213ENST00000618327 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.99□□□□□ -0.33
CIITA-213ENST00000618327 BRD7Q9NPI1 651 aa12.99□□□□□ -0.33
CIITA-213ENST00000618327 A0A1W2PR48 441 aa12.99□□□□□ -0.33
CIITA-213ENST00000618327 SH3D21A4FU49 640 aa12.99□□□□□ -0.33
CIITA-213ENST00000618327 AGAP14A8MT82 685 aa12.99□□□□□ -0.33
CIITA-213ENST00000618327 CTNSO60931 367 aa12.99□□□□□ -0.33
CIITA-213ENST00000618327 KCNJ10P78508 379 aa12.99□□□□□ -0.33
CIITA-213ENST00000618327 PROX2Q3B8N5 592 aa12.99□□□□□ -0.33
CIITA-213ENST00000618327 WASH2PQ6VEQ5 465 aa12.99□□□□□ -0.33
CIITA-213ENST00000618327 ZNF547Q8IVP9 402 aa12.99□□□□□ -0.33
CIITA-213ENST00000618327 LSM14AQ8ND56 463 aaKnown RBP12.99□□□□□ -0.33
CIITA-213ENST00000618327 TUBA1CQ9BQE3 449 aa12.99□□□□□ -0.33
CIITA-213ENST00000618327 NPLQ9BXD5 320 aaPredicted RBP12.99□□□□□ -0.33
CIITA-213ENST00000618327 J3KTA2 159 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 UBL4AP11441 157 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 DNASE1L3Q13609 305 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 ZNF367Q7RTV3 350 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 MMP21Q8N119 569 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 C1orf216Q8TAB5 229 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 ACOT11Q8WXI4 607 aaPredicted RBP12.98□□□□□ -0.33
CIITA-213ENST00000618327 PNPLA2Q96AD5 504 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 LDAHQ9H6V9 325 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 LAMP5Q9UJQ1 280 aa12.98□□□□□ -0.33
CIITA-213ENST00000618327 PCDHGB5Q9Y5G0 923 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms