RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 OSTF1Q92882 214 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 GAL3ST3Q96A11 431 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 CLDN23Q96B33 292 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 FAM46AQ96IP4 442 aaKnown RBP13.7□□□□□ -0.22
CDH1-213ENST00000612417 COQ7Q99807 217 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 ABCB9Q9NP78 766 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 KLHL28Q9NXS3 571 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 CNIH4Q9P003 139 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 CPNE7Q9UBL6 633 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 GPR52Q9Y2T5 361 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 SCN3AQ9NY46 2000 aa13.69□□□□□ -0.22
CDH1-213ENST00000612417 DUXAA6NLW8 204 aa13.69□□□□□ -0.22
CDH1-213ENST00000612417 CPSF4LA6NMK7 179 aaKnown RBP13.69□□□□□ -0.22
CDH1-213ENST00000612417 CCNKO75909 580 aa13.69□□□□□ -0.22
CDH1-213ENST00000612417 CCNYL3P0C7X3 344 aa13.69□□□□□ -0.22
CDH1-213ENST00000612417 SDC2P34741 201 aa13.69□□□□□ -0.22
CDH1-213ENST00000612417 TRHRP34981 398 aaPredicted RBP13.69□□□□□ -0.22
CDH1-213ENST00000612417 RAB8AP61006 207 aa13.69□□□□□ -0.22
CDH1-213ENST00000612417 MXD1Q05195 221 aa13.69□□□□□ -0.22
CDH1-213ENST00000612417 SCN1BQ07699 218 aa13.69□□□□□ -0.22
CDH1-213ENST00000612417 ACSM1Q08AH1 577 aa13.69□□□□□ -0.22
CDH1-213ENST00000612417 CAMK2BQ13554 666 aa13.69□□□□□ -0.22
CDH1-213ENST00000612417 DDI2Q5TDH0 399 aa13.69□□□□□ -0.22
CDH1-213ENST00000612417 AADACL4Q5VUY2 407 aa13.69□□□□□ -0.22
CDH1-213ENST00000612417 ZNF517Q6ZMY9 492 aaPredicted RBP13.69□□□□□ -0.22
CDH1-213ENST00000612417 PRR23CQ6ZRP0 262 aa13.69□□□□□ -0.22
CDH1-213ENST00000612417 SFTPA2Q8IWL1 248 aa13.69□□□□□ -0.22
CDH1-213ENST00000612417 GDPD1Q8N9F7 314 aa13.69□□□□□ -0.22
CDH1-213ENST00000612417 CADM4Q8NFZ8 388 aa13.69□□□□□ -0.22
CDH1-213ENST00000612417 AP3S1Q92572 193 aa13.69□□□□□ -0.22
CDH1-213ENST00000612417 SLC22A18Q96BI1 424 aa13.69□□□□□ -0.22
CDH1-213ENST00000612417 C10orf90Q96M02 699 aa13.69□□□□□ -0.22
CDH1-213ENST00000612417 HSPA12BQ96MM6 686 aa13.69□□□□□ -0.22
CDH1-213ENST00000612417 KATNB1Q9BVA0 655 aa13.69□□□□□ -0.22
CDH1-213ENST00000612417 PRR14Q9BWN1 585 aa13.69□□□□□ -0.22
CDH1-213ENST00000612417 EQTNQ9NQ60 294 aa13.69□□□□□ -0.22
CDH1-213ENST00000612417 GPR27Q9NS67 375 aa13.69□□□□□ -0.22
CDH1-213ENST00000612417 SPAG17Q6Q759 2223 aa13.69□□□□□ -0.22
CDH1-213ENST00000612417 A0A1W2PQ09 198 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 A0A1W2PQL4 384 aaPredicted RBP13.68□□□□□ -0.22
CDH1-213ENST00000612417 OR6C74A6NCV1 312 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 SURF4O15260 269 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 FRS3O43559 492 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 NDUFB5O43674 189 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 OR5F1O95221 314 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 AGR2O95994 175 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 WNT1P04628 370 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 GSTT2P0CG29 244 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 GSTT2BP0CG30 244 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 POLR2CP19387 275 aaPredicted RBP13.68□□□□□ -0.22
CDH1-213ENST00000612417 SLC1A3P43003 542 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 CDH11P55287 796 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 FAM214AQ32MH5 1076 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 RRM2BQ7LG56 351 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 PAQR7Q86WK9 346 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 MEX3DQ86XN8 651 aaKnown RBP13.68□□□□□ -0.22
CDH1-213ENST00000612417 OR52P1PQ8NH57 321 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 GATAD2BQ8WXI9 593 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 TMEM203Q969S6 136 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 MS4A4EQ96PG1 132 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 JAM3Q9BX67 310 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 TEX12Q9BXU0 123 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 RABL2AQ9UBK7 228 aaPredicted RBP13.68□□□□□ -0.22
CDH1-213ENST00000612417 GSTK1Q9Y2Q3 226 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 YARS2Q9Y2Z4 477 aaKnown RBP13.68□□□□□ -0.22
CDH1-213ENST00000612417 CACNA1IQ9P0X4 2223 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 TRDV1A0A1B0GX56 115 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 C19orf67A6NJJ6 358 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 OR5K4A6NMS3 321 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 AP3D1O14617 1153 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 APOL3O95236 402 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 IGHA1P01876 353 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 CLEC2LP0C7M8 214 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 HOXD11P31277 338 aaPredicted RBP13.68□□□□□ -0.22
CDH1-213ENST00000612417 RPS5P46782 204 aaKnown RBP13.68□□□□□ -0.22
CDH1-213ENST00000612417 RGS8P57771 180 aaPredicted RBP13.68□□□□□ -0.22
CDH1-213ENST00000612417 RPS15AP62244 130 aaKnown RBP13.68□□□□□ -0.22
CDH1-213ENST00000612417 MAP4K2Q12851 820 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 DSG2Q14126 1118 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 CRTC2Q53ET0 693 aaPredicted RBP13.68□□□□□ -0.22
CDH1-213ENST00000612417 TJAP1Q5JTD0 557 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 C6orf132Q5T0Z8 1188 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 NXNL2Q5VZ03 156 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 MFSD12Q6NUT3 480 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 CDC73Q6P1J9 531 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 FAM131AQ6UXB0 335 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 FRRS1Q6ZNA5 592 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 ZNF620Q6ZNG0 422 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 VN1R4Q7Z5H5 301 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 RAB43Q86YS6 212 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 TMEFF1Q8IYR6 380 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 SAMD14Q8IZD0 417 aaPredicted RBP13.68□□□□□ -0.22
CDH1-213ENST00000612417 OR4Q3Q8NH05 313 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 NT5CQ8TCD5 201 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 SLC37A2Q8TED4 501 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 C1GALT1C1Q96EU7 318 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 SLC35A4Q96G79 324 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 ZNF486Q96H40 463 aaPredicted RBP13.68□□□□□ -0.22
CDH1-213ENST00000612417 NEDD4LQ96PU5 975 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms