RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 PRDM14Q9GZV8 571 aa19.82■□□□□ 0.76
CBWD3-207ENST00000611426 ATP6V1HQ9UI12 483 aa19.82■□□□□ 0.76
CBWD3-207ENST00000611426 POMPQ9Y244 141 aa19.82■□□□□ 0.76
CBWD3-207ENST00000611426 GNG14A0A1W2PPG7 69 aa19.81■□□□□ 0.76
CBWD3-207ENST00000611426 KDM4EB2RXH2 506 aaPredicted RBP19.81■□□□□ 0.76
CBWD3-207ENST00000611426 SYT5O00445 386 aa19.81■□□□□ 0.76
CBWD3-207ENST00000611426 SCAMP2O15127 329 aaKnown RBP19.81■□□□□ 0.76
CBWD3-207ENST00000611426 IL2RAP01589 272 aa19.81■□□□□ 0.76
CBWD3-207ENST00000611426 HSD17B1P14061 328 aa19.81■□□□□ 0.76
CBWD3-207ENST00000611426 BMP7P18075 431 aa19.81■□□□□ 0.76
CBWD3-207ENST00000611426 DRD5P21918 477 aa19.81■□□□□ 0.76
CBWD3-207ENST00000611426 ME2P23368 584 aa19.81■□□□□ 0.76
CBWD3-207ENST00000611426 PTPN6P29350 595 aa19.81■□□□□ 0.76
CBWD3-207ENST00000611426 UQCRC1P31930 480 aa19.81■□□□□ 0.76
CBWD3-207ENST00000611426 CEACAM8P31997 349 aaPredicted RBP19.81■□□□□ 0.76
CBWD3-207ENST00000611426 S100A3P33764 101 aa19.81■□□□□ 0.76
CBWD3-207ENST00000611426 TIMP3P35625 211 aa19.81■□□□□ 0.76
CBWD3-207ENST00000611426 SOX18P35713 384 aa19.81■□□□□ 0.76
CBWD3-207ENST00000611426 PPICP45877 212 aa19.81■□□□□ 0.76
CBWD3-207ENST00000611426 EMDP50402 254 aa19.81■□□□□ 0.76
CBWD3-207ENST00000611426 DGKQP52824 942 aa19.81■□□□□ 0.76
CBWD3-207ENST00000611426 MRPS35P82673 323 aaKnown RBP19.81■□□□□ 0.76
CBWD3-207ENST00000611426 NHSL2Q5HYW2 709 aa19.81■□□□□ 0.76
CBWD3-207ENST00000611426 LRIF1Q5T3J3 769 aa19.81■□□□□ 0.76
CBWD3-207ENST00000611426 TMEM81Q6P7N7 255 aa19.81■□□□□ 0.76
CBWD3-207ENST00000611426 NAXEQ8NCW5 288 aa19.81■□□□□ 0.76
CBWD3-207ENST00000611426 JADE3Q92613 823 aa19.81■□□□□ 0.76
CBWD3-207ENST00000611426 HGDQ93099 445 aa19.81■□□□□ 0.76
CBWD3-207ENST00000611426 NTNG2Q96CW9 530 aa19.81■□□□□ 0.76
CBWD3-207ENST00000611426 COQ8BQ96D53 544 aa19.81■□□□□ 0.76
CBWD3-207ENST00000611426 LRRC46Q96FV0 321 aa19.81■□□□□ 0.76
CBWD3-207ENST00000611426 EGLN2Q96KS0 407 aa19.81■□□□□ 0.76
CBWD3-207ENST00000611426 EBPLQ9BY08 206 aa19.81■□□□□ 0.76
CBWD3-207ENST00000611426 UGT2B28Q9BY64 529 aa19.81■□□□□ 0.76
CBWD3-207ENST00000611426 FAM120CQ9NX05 1096 aaKnown RBP19.81■□□□□ 0.76
CBWD3-207ENST00000611426 EHD3Q9NZN3 535 aa19.81■□□□□ 0.76
CBWD3-207ENST00000611426 KLRF1Q9NZS2 232 aa19.81■□□□□ 0.76
CBWD3-207ENST00000611426 TRBV5-3A0A0A0MS03 114 aa19.8■□□□□ 0.76
CBWD3-207ENST00000611426 C2orf72A6NCS6 295 aa19.8■□□□□ 0.76
CBWD3-207ENST00000611426 TBX19O60806 448 aa19.8■□□□□ 0.76
CBWD3-207ENST00000611426 ICOSLGO75144 302 aa19.8■□□□□ 0.76
CBWD3-207ENST00000611426 ERN1O75460 977 aaKnown RBP19.8■□□□□ 0.76
CBWD3-207ENST00000611426 ATP6V1G2O95670 118 aa19.8■□□□□ 0.76
CBWD3-207ENST00000611426 IL3P08700 152 aa19.8■□□□□ 0.76
CBWD3-207ENST00000611426 DRD2P14416 443 aa19.8■□□□□ 0.76
CBWD3-207ENST00000611426 HOXB9P17482 250 aaPredicted RBP19.8■□□□□ 0.76
CBWD3-207ENST00000611426 HPCAL1P37235 193 aa19.8■□□□□ 0.76
CBWD3-207ENST00000611426 KIR2DL3P43628 341 aa19.8■□□□□ 0.76
CBWD3-207ENST00000611426 PHC1P78364 1004 aa19.8■□□□□ 0.76
CBWD3-207ENST00000611426 LRRC74AQ0VAA2 488 aa19.8■□□□□ 0.76
CBWD3-207ENST00000611426 SNTA1Q13424 505 aa19.8■□□□□ 0.76
CBWD3-207ENST00000611426 SNTB1Q13884 538 aaKnown RBP19.8■□□□□ 0.76
CBWD3-207ENST00000611426 KPNB1Q14974 876 aaKnown RBP19.8■□□□□ 0.76
CBWD3-207ENST00000611426 C1orf146Q5VVC0 180 aa19.8■□□□□ 0.76
CBWD3-207ENST00000611426 SPNS3Q6ZMD2 512 aa19.8■□□□□ 0.76
CBWD3-207ENST00000611426 DHDDSQ86SQ9 333 aa19.8■□□□□ 0.76
CBWD3-207ENST00000611426 YRDCQ86U90 279 aaKnown RBP19.8■□□□□ 0.76
CBWD3-207ENST00000611426 SLC15A3Q8IY34 581 aa19.8■□□□□ 0.76
CBWD3-207ENST00000611426 ZZZ3Q8IYH5 903 aa19.8■□□□□ 0.76
CBWD3-207ENST00000611426 RELL2Q8NC24 303 aaPredicted RBP19.8■□□□□ 0.76
CBWD3-207ENST00000611426 FAM83FQ8NEG4 500 aaPredicted RBP19.8■□□□□ 0.76
CBWD3-207ENST00000611426 OR8J3Q8NGG0 315 aa19.8■□□□□ 0.76
CBWD3-207ENST00000611426 CLHC1Q8NHS4 586 aa19.8■□□□□ 0.76
CBWD3-207ENST00000611426 ABTB1Q969K4 478 aaPredicted RBP19.8■□□□□ 0.76
CBWD3-207ENST00000611426 OSBPL11Q9BXB4 747 aa19.8■□□□□ 0.76
CBWD3-207ENST00000611426 RMND5AQ9H871 391 aa19.8■□□□□ 0.76
CBWD3-207ENST00000611426 SERHLQ9NQF3 203 aa19.8■□□□□ 0.76
CBWD3-207ENST00000611426 ZNF629Q9UEG4 869 aaPredicted RBP19.8■□□□□ 0.76
CBWD3-207ENST00000611426 A0A096LPI6 279 aa19.79■□□□□ 0.76
CBWD3-207ENST00000611426 DNAJA2O60884 412 aa19.79■□□□□ 0.76
CBWD3-207ENST00000611426 SCN2BO60939 215 aa19.79■□□□□ 0.76
CBWD3-207ENST00000611426 UGT2B11O75310 529 aa19.79■□□□□ 0.76
CBWD3-207ENST00000611426 BCAS2O75934 225 aaPredicted RBP19.79■□□□□ 0.76
CBWD3-207ENST00000611426 PDE5AO76074 875 aa19.79■□□□□ 0.76
CBWD3-207ENST00000611426 PEX19P40855 299 aa19.79■□□□□ 0.76
CBWD3-207ENST00000611426 SLC7A2P52569 658 aa19.79■□□□□ 0.76
CBWD3-207ENST00000611426 NSUN5P2Q63ZY6 315 aa19.79■□□□□ 0.76
CBWD3-207ENST00000611426 FAM71E1Q6IPT2 247 aa19.79■□□□□ 0.76
CBWD3-207ENST00000611426 SLC2A7Q6PXP3 512 aa19.79■□□□□ 0.76
CBWD3-207ENST00000611426 R3HCC1LQ7Z5L2 792 aaKnown RBP19.79■□□□□ 0.76
CBWD3-207ENST00000611426 ZNF675Q8TD23 568 aa19.79■□□□□ 0.76
CBWD3-207ENST00000611426 EXOSC8Q96B26 276 aaKnown RBP19.79■□□□□ 0.76
CBWD3-207ENST00000611426 WDYHV1Q96HA8 205 aa19.79■□□□□ 0.76
CBWD3-207ENST00000611426 OR52E6Q96RD3 313 aa19.79■□□□□ 0.76
CBWD3-207ENST00000611426 TRIB1Q96RU8 372 aa19.79■□□□□ 0.76
CBWD3-207ENST00000611426 CGREF1Q99674 301 aa19.79■□□□□ 0.76
CBWD3-207ENST00000611426 GALNT9Q9HCQ5 603 aa19.79■□□□□ 0.76
CBWD3-207ENST00000611426 DNAJB12Q9NXW2 375 aaKnown RBP19.79■□□□□ 0.76
CBWD3-207ENST00000611426 AP3M1Q9Y2T2 418 aa19.79■□□□□ 0.76
CBWD3-207ENST00000611426 GPR55Q9Y2T6 319 aaPredicted RBP19.79■□□□□ 0.76
CBWD3-207ENST00000611426 GMEB1Q9Y692 573 aa19.79■□□□□ 0.76
CBWD3-207ENST00000611426 FRG2CA6NGY1 282 aa19.78■□□□□ 0.76
CBWD3-207ENST00000611426 SNPHO15079 494 aa19.78■□□□□ 0.76
CBWD3-207ENST00000611426 TO15178 435 aa19.78■□□□□ 0.76
CBWD3-207ENST00000611426 KCNH1O95259 989 aa19.78■□□□□ 0.76
CBWD3-207ENST00000611426 GCKP35557 465 aa19.78■□□□□ 0.76
CBWD3-207ENST00000611426 PTGDSP41222 190 aa19.78■□□□□ 0.76
CBWD3-207ENST00000611426 ASCL1P50553 236 aa19.78■□□□□ 0.76
CBWD3-207ENST00000611426 EEFSECP57772 596 aaKnown RBP19.78■□□□□ 0.76
CBWD3-207ENST00000611426 TRAP1Q12931 704 aaKnown RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms