RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 HCN1O60741 890 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 DCTN3O75935 186 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 WISP2O76076 250 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 ZIC2O95409 532 aaPredicted RBP12.65□□□□□ -0.38
RNF40-212ENST00000602784 H6PDO95479 791 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 ANGPTL1O95841 491 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 HPNP05981 417 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 COX4I1P13073 169 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 GDF1P27539 372 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 MSX1P28360 303 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 PRDX6P30041 224 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 ADH7P40394 386 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 HPCAP84074 193 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 SYPL1Q16563 259 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 GPAT3Q53EU6 434 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 PRAMEF8Q5VWM4 474 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 PRAMEF7Q5VXH5 474 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 TYW3Q6IPR3 259 aaKnown RBP12.65□□□□□ -0.38
RNF40-212ENST00000602784 FRRS1Q6ZNA5 592 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 TREML1Q86YW5 311 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 ZNF619Q8N2I2 560 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 ANKFN1Q8N957 763 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 FADS6Q8N9I5 356 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 SLC38A5Q8WUX1 472 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 CMTM5Q96DZ9 223 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 LRRC37BQ96QE4 947 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 SH3GL1Q99961 368 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 RTN4RQ9BZR6 473 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 DEFB127Q9H1M4 99 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 TSPAN10Q9H1Z9 355 aaPredicted RBP12.65□□□□□ -0.38
RNF40-212ENST00000602784 SLC38A1Q9H2H9 487 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 IKZF5Q9H5V7 419 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 A4GALTQ9NPC4 353 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 GID8Q9NWU2 228 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 MKLN1Q9UL63 735 aa12.65□□□□□ -0.38
RNF40-212ENST00000602784 UBR5O95071 2799 aaPredicted RBP12.64□□□□□ -0.39
RNF40-212ENST00000602784 UGT2B17O75795 530 aa12.64□□□□□ -0.39
RNF40-212ENST00000602784 CHRM4P08173 479 aa12.64□□□□□ -0.39
RNF40-212ENST00000602784 CRISP3P54108 245 aa12.64□□□□□ -0.39
RNF40-212ENST00000602784 RBPJQ06330 500 aa12.64□□□□□ -0.39
RNF40-212ENST00000602784 ELOAQ14241 798 aaKnown RBP12.64□□□□□ -0.39
RNF40-212ENST00000602784 GPR68Q15743 365 aa12.64□□□□□ -0.39
RNF40-212ENST00000602784 MAPK11Q15759 364 aa12.64□□□□□ -0.39
RNF40-212ENST00000602784 FAM91A1Q658Y4 838 aa12.64□□□□□ -0.39
RNF40-212ENST00000602784 REP15Q6BDI9 236 aa12.64□□□□□ -0.39
RNF40-212ENST00000602784 NANOGP8Q6NSW7 305 aa12.64□□□□□ -0.39
RNF40-212ENST00000602784 ARHGAP11AQ6P4F7 1023 aa12.64□□□□□ -0.39
RNF40-212ENST00000602784 TRILQ7L0X0 811 aa12.64□□□□□ -0.39
RNF40-212ENST00000602784 OR2M3Q8NG83 312 aa12.64□□□□□ -0.39
RNF40-212ENST00000602784 OR8J3Q8NGG0 315 aa12.64□□□□□ -0.39
RNF40-212ENST00000602784 LRRC58Q96CX6 371 aa12.64□□□□□ -0.39
RNF40-212ENST00000602784 TMEM38AQ9H6F2 299 aa12.64□□□□□ -0.39
RNF40-212ENST00000602784 PTGES2Q9H7Z7 377 aa12.64□□□□□ -0.39
RNF40-212ENST00000602784 NANOGQ9H9S0 305 aa12.64□□□□□ -0.39
RNF40-212ENST00000602784 EFCAB1Q9HAE3 211 aa12.64□□□□□ -0.39
RNF40-212ENST00000602784 BCL2L10Q9HD36 194 aa12.64□□□□□ -0.39
RNF40-212ENST00000602784 SUCOQ9UBS9 1254 aaKnown RBP12.64□□□□□ -0.39
RNF40-212ENST00000602784 KCNE5Q9UJ90 142 aa12.64□□□□□ -0.39
RNF40-212ENST00000602784 ZNF835Q9Y2P0 537 aa12.64□□□□□ -0.39
RNF40-212ENST00000602784 A0A0G2JPF8 293 aa12.63□□□□□ -0.39
RNF40-212ENST00000602784 OR14I1A6ND48 311 aa12.63□□□□□ -0.39
RNF40-212ENST00000602784 AGAP5A6NIR3 686 aa12.63□□□□□ -0.39
RNF40-212ENST00000602784 HNRNPCL2B2RXH8 293 aa12.63□□□□□ -0.39
RNF40-212ENST00000602784 HNRNPCL3B7ZW38 293 aa12.63□□□□□ -0.39
RNF40-212ENST00000602784 FXYD1O00168 92 aa12.63□□□□□ -0.39
RNF40-212ENST00000602784 AQP7O14520 342 aa12.63□□□□□ -0.39
RNF40-212ENST00000602784 HNRNPCL1O60812 293 aaKnown RBP12.63□□□□□ -0.39
RNF40-212ENST00000602784 TRAPPC6AO75865 159 aa12.63□□□□□ -0.39
RNF40-212ENST00000602784 CELA3AP09093 270 aa12.63□□□□□ -0.39
RNF40-212ENST00000602784 HNRNPCL4P0DMR1 293 aa12.63□□□□□ -0.39
RNF40-212ENST00000602784 SRD5A2P31213 254 aa12.63□□□□□ -0.39
RNF40-212ENST00000602784 DSCR4P56555 118 aaPredicted RBP12.63□□□□□ -0.39
RNF40-212ENST00000602784 CHRNEQ04844 493 aa12.63□□□□□ -0.39
RNF40-212ENST00000602784 GANABQ14697 944 aaKnown RBP12.63□□□□□ -0.39
RNF40-212ENST00000602784 CD226Q15762 336 aa12.63□□□□□ -0.39
RNF40-212ENST00000602784 ZNF630Q2M218 657 aaPredicted RBP12.63□□□□□ -0.39
RNF40-212ENST00000602784 GLYR1Q49A26 553 aaPredicted RBP12.63□□□□□ -0.39
RNF40-212ENST00000602784 PDZK1Q5T2W1 519 aa12.63□□□□□ -0.39
RNF40-212ENST00000602784 GCNT6Q5T4J0 391 aa12.63□□□□□ -0.39
RNF40-212ENST00000602784 OR5M10Q6IEU7 315 aa12.63□□□□□ -0.39
RNF40-212ENST00000602784 CHERPQ8IWX8 916 aaKnown RBP12.63□□□□□ -0.39
RNF40-212ENST00000602784 POU5F2Q8N7G0 328 aa12.63□□□□□ -0.39
RNF40-212ENST00000602784 CCDC197Q8NCU1 140 aa12.63□□□□□ -0.39
RNF40-212ENST00000602784 OR4K17Q8NGC6 315 aa12.63□□□□□ -0.39
RNF40-212ENST00000602784 ZG16BQ96DA0 208 aa12.63□□□□□ -0.39
RNF40-212ENST00000602784 TREX2Q9BQ50 279 aaPredicted RBP12.63□□□□□ -0.39
RNF40-212ENST00000602784 THUMPD3Q9BV44 507 aaKnown RBP12.63□□□□□ -0.39
RNF40-212ENST00000602784 OR2B2Q9GZK3 357 aa12.63□□□□□ -0.39
RNF40-212ENST00000602784 DSN1Q9H410 356 aa12.63□□□□□ -0.39
RNF40-212ENST00000602784 KAT8Q9H7Z6 458 aaKnown RBP12.63□□□□□ -0.39
RNF40-212ENST00000602784 FBXL2Q9UKC9 423 aa12.63□□□□□ -0.39
RNF40-212ENST00000602784 HRH3Q9Y5N1 445 aa12.63□□□□□ -0.39
RNF40-212ENST00000602784 DSPPQ9NZW4 1301 aa12.62□□□□□ -0.39
RNF40-212ENST00000602784 ZGRF1Q86YA3 2104 aa12.62□□□□□ -0.39
RNF40-212ENST00000602784 ZNF407Q9C0G0 2248 aa12.62□□□□□ -0.39
RNF40-212ENST00000602784 FASNP49327 2511 aaKnown RBP12.62□□□□□ -0.39
RNF40-212ENST00000602784 TRGV5A0A0B4J1U4 118 aa12.62□□□□□ -0.39
RNF40-212ENST00000602784 NPIPA5A0A0B4J1W7 369 aa12.62□□□□□ -0.39
RNF40-212ENST00000602784 A0A1B0GTH9 108 aa12.62□□□□□ -0.39
RNF40-212ENST00000602784 SERINC4A6NH21 518 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms