RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 DACH2Q96NX9 599 aa16.93■□□□□ 0.3
PNKP-213ENST00000599543 WDR55Q9H6Y2 383 aaPredicted RBP16.93■□□□□ 0.3
PNKP-213ENST00000599543 FAM120CQ9NX05 1096 aaKnown RBP16.93■□□□□ 0.3
PNKP-213ENST00000599543 FLRT3Q9NZU0 649 aa16.93■□□□□ 0.3
PNKP-213ENST00000599543 NIPBLQ6KC79 2804 aaeCLIP16.92■□□□□ 0.3
PNKP-213ENST00000599543 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.92■□□□□ 0.3
PNKP-213ENST00000599543 A0A1W2PNV4 684 aa16.92■□□□□ 0.3
PNKP-213ENST00000599543 SH3D21A4FU49 640 aa16.92■□□□□ 0.3
PNKP-213ENST00000599543 SLC22A20A6NK97 555 aa16.92■□□□□ 0.3
PNKP-213ENST00000599543 SDHDO14521 159 aa16.92■□□□□ 0.3
PNKP-213ENST00000599543 FADS1O60427 444 aa16.92■□□□□ 0.3
PNKP-213ENST00000599543 DIAPH2O60879 1101 aa16.92■□□□□ 0.3
PNKP-213ENST00000599543 TNFSF13O75888 250 aa16.92■□□□□ 0.3
PNKP-213ENST00000599543 TGM6O95932 706 aa16.92■□□□□ 0.3
PNKP-213ENST00000599543 KLK2P20151 261 aa16.92■□□□□ 0.3
PNKP-213ENST00000599543 EEFSECP57772 596 aaKnown RBP16.92■□□□□ 0.3
PNKP-213ENST00000599543 HSPB3Q12988 150 aa16.92■□□□□ 0.3
PNKP-213ENST00000599543 PTGR1Q14914 329 aa16.92■□□□□ 0.3
PNKP-213ENST00000599543 MAVSQ7Z434 540 aa16.92■□□□□ 0.3
PNKP-213ENST00000599543 KRTCAP2Q8N6L1 136 aa16.92■□□□□ 0.3
PNKP-213ENST00000599543 CNEP1R1Q8N9A8 125 aa16.92■□□□□ 0.3
PNKP-213ENST00000599543 RAB3IL1Q8TBN0 382 aa16.92■□□□□ 0.3
PNKP-213ENST00000599543 CIDECQ96AQ7 238 aaPredicted RBP16.92■□□□□ 0.3
PNKP-213ENST00000599543 MBD6Q96DN6 1003 aa16.92■□□□□ 0.3
PNKP-213ENST00000599543 METTL2AQ96IZ6 378 aaKnown RBP16.92■□□□□ 0.3
PNKP-213ENST00000599543 LMF2Q9BU23 707 aaKnown RBP16.92■□□□□ 0.3
PNKP-213ENST00000599543 C3orf14Q9HBI5 128 aa16.92■□□□□ 0.3
PNKP-213ENST00000599543 MED11Q9P086 117 aa16.92■□□□□ 0.3
PNKP-213ENST00000599543 A8MXE2 369 aa16.91■□□□□ 0.3
PNKP-213ENST00000599543 LINC01387J3KSC0 135 aa16.91■□□□□ 0.3
PNKP-213ENST00000599543 PDPK1O15530 556 aa16.91■□□□□ 0.3
PNKP-213ENST00000599543 SMNDC1O75940 238 aaKnown RBP eCLIP16.91■□□□□ 0.3
PNKP-213ENST00000599543 KCNH1O95259 989 aa16.91■□□□□ 0.3
PNKP-213ENST00000599543 IL33O95760 270 aa16.91■□□□□ 0.3
PNKP-213ENST00000599543 CRHP06850 196 aa16.91■□□□□ 0.3
PNKP-213ENST00000599543 IFI6P09912 130 aa16.91■□□□□ 0.3
PNKP-213ENST00000599543 GPC1P35052 558 aa16.91■□□□□ 0.3
PNKP-213ENST00000599543 OR7A2PQ8NGA2 310 aa16.91■□□□□ 0.3
PNKP-213ENST00000599543 PIGQQ9BRB3 760 aa16.91■□□□□ 0.3
PNKP-213ENST00000599543 TBL1XR1Q9BZK7 514 aa16.91■□□□□ 0.3
PNKP-213ENST00000599543 EQTNQ9NQ60 294 aa16.91■□□□□ 0.3
PNKP-213ENST00000599543 SH3BP4Q9P0V3 963 aa16.91■□□□□ 0.3
PNKP-213ENST00000599543 NDRG3Q9UGV2 375 aa16.91■□□□□ 0.3
PNKP-213ENST00000599543 TMED5Q9Y3A6 229 aa16.91■□□□□ 0.3
PNKP-213ENST00000599543 TTC36A6NLP5 189 aa16.9■□□□□ 0.3
PNKP-213ENST00000599543 H3BML4 177 aa16.9■□□□□ 0.3
PNKP-213ENST00000599543 MSTNO14793 375 aa16.9■□□□□ 0.3
PNKP-213ENST00000599543 CASKO14936 926 aa16.9■□□□□ 0.3
PNKP-213ENST00000599543 SEC14L5O43304 696 aa16.9■□□□□ 0.3
PNKP-213ENST00000599543 ATE1O95260 518 aa16.9■□□□□ 0.3
PNKP-213ENST00000599543 HRGP04196 525 aa16.9■□□□□ 0.3
PNKP-213ENST00000599543 G6PDP11413 515 aa16.9■□□□□ 0.3
PNKP-213ENST00000599543 EPHA3P29320 983 aa16.9■□□□□ 0.3
PNKP-213ENST00000599543 GABRA3P34903 492 aa16.9■□□□□ 0.3
PNKP-213ENST00000599543 NME5P56597 212 aa16.9■□□□□ 0.3
PNKP-213ENST00000599543 POU4F3Q15319 338 aa16.9■□□□□ 0.3
PNKP-213ENST00000599543 SLC9B1Q4ZJI4 515 aa16.9■□□□□ 0.3
PNKP-213ENST00000599543 ZNF551Q7Z340 670 aaPredicted RBP16.9■□□□□ 0.3
PNKP-213ENST00000599543 SZRD1Q7Z422 152 aa16.9■□□□□ 0.3
PNKP-213ENST00000599543 MARCH3Q86UD3 253 aa16.9■□□□□ 0.3
PNKP-213ENST00000599543 DUSP19Q8WTR2 217 aa16.9■□□□□ 0.3
PNKP-213ENST00000599543 PPCDCQ96CD2 204 aa16.9■□□□□ 0.3
PNKP-213ENST00000599543 C1GALT1C1Q96EU7 318 aa16.9■□□□□ 0.3
PNKP-213ENST00000599543 THOC1Q96FV9 657 aaKnown RBP16.9■□□□□ 0.3
PNKP-213ENST00000599543 MARK4Q96L34 752 aa16.9■□□□□ 0.3
PNKP-213ENST00000599543 PINK1Q9BXM7 581 aa16.9■□□□□ 0.3
PNKP-213ENST00000599543 RTN4RQ9BZR6 473 aa16.9■□□□□ 0.3
PNKP-213ENST00000599543 REEP4Q9H6H4 257 aa16.9■□□□□ 0.3
PNKP-213ENST00000599543 PLEKHF2Q9H8W4 249 aa16.9■□□□□ 0.3
PNKP-213ENST00000599543 MEAF6Q9HAF1 191 aa16.9■□□□□ 0.3
PNKP-213ENST00000599543 KLF11O14901 512 aa16.89■□□□□ 0.29
PNKP-213ENST00000599543 HDAC3O15379 428 aa16.89■□□□□ 0.29
PNKP-213ENST00000599543 SNUPNO95149 360 aaKnown RBP16.89■□□□□ 0.29
PNKP-213ENST00000599543 UTS2O95399 124 aa16.89■□□□□ 0.29
PNKP-213ENST00000599543 PRPS2P11908 318 aa16.89■□□□□ 0.29
PNKP-213ENST00000599543 MAPK1P28482 360 aa16.89■□□□□ 0.29
PNKP-213ENST00000599543 EMX2Q04743 252 aa16.89■□□□□ 0.29
PNKP-213ENST00000599543 DEFB113Q30KQ7 82 aa16.89■□□□□ 0.29
PNKP-213ENST00000599543 VPS26BQ4G0F5 336 aa16.89■□□□□ 0.29
PNKP-213ENST00000599543 NXNQ6DKJ4 435 aa16.89■□□□□ 0.29
PNKP-213ENST00000599543 OR5M1Q8NGP8 315 aa16.89■□□□□ 0.29
PNKP-213ENST00000599543 ZFP28Q8NHY6 868 aa16.89■□□□□ 0.29
PNKP-213ENST00000599543 GPR151Q8TDV0 419 aa16.89■□□□□ 0.29
PNKP-213ENST00000599543 CKAP2Q8WWK9 683 aa16.89■□□□□ 0.29
PNKP-213ENST00000599543 SMPDL3BQ92485 455 aa16.89■□□□□ 0.29
PNKP-213ENST00000599543 ZNF764Q96H86 408 aaPredicted RBP16.89■□□□□ 0.29
PNKP-213ENST00000599543 EIF3LQ9Y262 564 aaKnown RBP16.89■□□□□ 0.29
PNKP-213ENST00000599543 ZNF337Q9Y3M9 751 aa16.89■□□□□ 0.29
PNKP-213ENST00000599543 NAV3Q8IVL0 2385 aa16.89■□□□□ 0.29
PNKP-213ENST00000599543 OR2M5A3KFT3 312 aa16.88■□□□□ 0.29
PNKP-213ENST00000599543 H0YC42 278 aa16.88■□□□□ 0.29
PNKP-213ENST00000599543 GMFGO60234 142 aa16.88■□□□□ 0.29
PNKP-213ENST00000599543 ANGPTL1O95841 491 aa16.88■□□□□ 0.29
PNKP-213ENST00000599543 ALDOCP09972 364 aaKnown RBP16.88■□□□□ 0.29
PNKP-213ENST00000599543 LBPP18428 481 aa16.88■□□□□ 0.29
PNKP-213ENST00000599543 HPCAL1P37235 193 aa16.88■□□□□ 0.29
PNKP-213ENST00000599543 SUCLG1P53597 346 aaKnown RBP16.88■□□□□ 0.29
PNKP-213ENST00000599543 TPD52P55327 224 aaPredicted RBP16.88■□□□□ 0.29
PNKP-213ENST00000599543 PRR5P85299 388 aa16.88■□□□□ 0.29
PNKP-213ENST00000599543 C17orf67Q0P5P2 114 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms