RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 ATP5J2P56134 94 aa18.94■□□□□ 0.62
PNKP-212ENST00000599454 RAC1P63000 192 aa18.94■□□□□ 0.62
PNKP-212ENST00000599454 WHAMMP3Q1A5X7 153 aa18.94■□□□□ 0.62
PNKP-212ENST00000599454 APOOLQ6UXV4 268 aa18.94■□□□□ 0.62
PNKP-212ENST00000599454 ESPNLQ6ZVH7 1005 aa18.94■□□□□ 0.62
PNKP-212ENST00000599454 TRIM46Q7Z4K8 759 aa18.94■□□□□ 0.62
PNKP-212ENST00000599454 C17orf53Q8N3J3 647 aaPredicted RBP18.94■□□□□ 0.62
PNKP-212ENST00000599454 SPATA3Q8NHX4 192 aa18.94■□□□□ 0.62
PNKP-212ENST00000599454 ACTRT2Q8TDY3 377 aa18.94■□□□□ 0.62
PNKP-212ENST00000599454 PLPPR2Q96GM1 343 aa18.94■□□□□ 0.62
PNKP-212ENST00000599454 ACTR6Q9GZN1 396 aa18.94■□□□□ 0.62
PNKP-212ENST00000599454 IQCGQ9H095 443 aaKnown RBP18.94■□□□□ 0.62
PNKP-212ENST00000599454 CLEC4AQ9UMR7 237 aa18.94■□□□□ 0.62
PNKP-212ENST00000599454 POLR3HQ9Y535 204 aaPredicted RBP18.94■□□□□ 0.62
PNKP-212ENST00000599454 CADP27708 2225 aa18.94■□□□□ 0.62
PNKP-212ENST00000599454 CR1P17927 2039 aa18.93■□□□□ 0.62
PNKP-212ENST00000599454 GXYLT2A0PJZ3 443 aa18.93■□□□□ 0.62
PNKP-212ENST00000599454 SHISA8B8ZZ34 492 aa18.93■□□□□ 0.62
PNKP-212ENST00000599454 NDUFB5O43674 189 aa18.93■□□□□ 0.62
PNKP-212ENST00000599454 IGKV1D-16P01601 117 aa18.93■□□□□ 0.62
PNKP-212ENST00000599454 PRPS2P11908 318 aa18.93■□□□□ 0.62
PNKP-212ENST00000599454 PSMB1P20618 241 aaKnown RBP18.93■□□□□ 0.62
PNKP-212ENST00000599454 MAP3K8P41279 467 aa18.93■□□□□ 0.62
PNKP-212ENST00000599454 SLC29A2Q14542 456 aa18.93■□□□□ 0.62
PNKP-212ENST00000599454 CTU2Q2VPK5 515 aaKnown RBP18.93■□□□□ 0.62
PNKP-212ENST00000599454 PDSS1Q5T2R2 415 aa18.93■□□□□ 0.62
PNKP-212ENST00000599454 GTF2IRD2BQ6EKJ0 949 aa18.93■□□□□ 0.62
PNKP-212ENST00000599454 NOXRED1Q6NXP6 359 aa18.93■□□□□ 0.62
PNKP-212ENST00000599454 GTF2IRD2Q86UP8 949 aa18.93■□□□□ 0.62
PNKP-212ENST00000599454 EXOC3L1Q86VI1 746 aa18.93■□□□□ 0.62
PNKP-212ENST00000599454 WFDC8Q8IUA0 241 aa18.93■□□□□ 0.62
PNKP-212ENST00000599454 CEP70Q8NHQ1 597 aa18.93■□□□□ 0.62
PNKP-212ENST00000599454 GPR151Q8TDV0 419 aa18.93■□□□□ 0.62
PNKP-212ENST00000599454 ZNF764Q96H86 408 aaPredicted RBP18.93■□□□□ 0.62
PNKP-212ENST00000599454 RRAGDQ9NQL2 400 aaPredicted RBP18.93■□□□□ 0.62
PNKP-212ENST00000599454 GMFGO60234 142 aa18.92■□□□□ 0.62
PNKP-212ENST00000599454 NKX2-2O95096 273 aa18.92■□□□□ 0.62
PNKP-212ENST00000599454 OXSR1O95747 527 aaPredicted RBP18.92■□□□□ 0.62
PNKP-212ENST00000599454 TUBBP07437 444 aa18.92■□□□□ 0.62
PNKP-212ENST00000599454 GCAP28676 217 aa18.92■□□□□ 0.62
PNKP-212ENST00000599454 LCN1P31025 176 aa18.92■□□□□ 0.62
PNKP-212ENST00000599454 ZNF41P51814 821 aaPredicted RBP18.92■□□□□ 0.62
PNKP-212ENST00000599454 FOXA1P55317 472 aa18.92■□□□□ 0.62
PNKP-212ENST00000599454 ETFDHQ16134 617 aa18.92■□□□□ 0.62
PNKP-212ENST00000599454 CPTPQ5TA50 214 aa18.92■□□□□ 0.62
PNKP-212ENST00000599454 ADAM5Q6NVV9 412 aa18.92■□□□□ 0.62
PNKP-212ENST00000599454 CXXC5Q7LFL8 322 aaKnown RBP18.92■□□□□ 0.62
PNKP-212ENST00000599454 MISPQ8IVT2 679 aa18.92■□□□□ 0.62
PNKP-212ENST00000599454 CCNYL1Q8N7R7 359 aa18.92■□□□□ 0.62
PNKP-212ENST00000599454 CDRT4Q8N9R6 151 aa18.92■□□□□ 0.62
PNKP-212ENST00000599454 OR2V1Q8NHB1 315 aa18.92■□□□□ 0.62
PNKP-212ENST00000599454 PIK3R3Q92569 461 aa18.92■□□□□ 0.62
PNKP-212ENST00000599454 EQTNQ9NQ60 294 aa18.92■□□□□ 0.62
PNKP-212ENST00000599454 NUP214P35658 2090 aaPredicted RBP18.91■□□□□ 0.62
PNKP-212ENST00000599454 UBFD1O14562 309 aaKnown RBP18.91■□□□□ 0.62
PNKP-212ENST00000599454 PDPK1O15530 556 aa18.91■□□□□ 0.62
PNKP-212ENST00000599454 CXCL13O43927 109 aa18.91■□□□□ 0.62
PNKP-212ENST00000599454 CRCPO75575 148 aa18.91■□□□□ 0.62
PNKP-212ENST00000599454 PLAUP00749 431 aa18.91■□□□□ 0.62
PNKP-212ENST00000599454 PABPC4LP0CB38 370 aaKnown RBP18.91■□□□□ 0.62
PNKP-212ENST00000599454 ME2P23368 584 aa18.91■□□□□ 0.62
PNKP-212ENST00000599454 PSMA4P25789 261 aaKnown RBP18.91■□□□□ 0.62
PNKP-212ENST00000599454 GPC1P35052 558 aa18.91■□□□□ 0.62
PNKP-212ENST00000599454 RPS4XP62701 263 aaKnown RBP18.91■□□□□ 0.62
PNKP-212ENST00000599454 HSPB3Q12988 150 aa18.91■□□□□ 0.62
PNKP-212ENST00000599454 GLE1Q53GS7 698 aaKnown RBP18.91■□□□□ 0.62
PNKP-212ENST00000599454 ZNF551Q7Z340 670 aaPredicted RBP18.91■□□□□ 0.62
PNKP-212ENST00000599454 GALNT10Q86SR1 603 aa18.91■□□□□ 0.62
PNKP-212ENST00000599454 STEAP2Q8NFT2 490 aa18.91■□□□□ 0.62
PNKP-212ENST00000599454 OR6Y1Q8NGX8 325 aa18.91■□□□□ 0.62
PNKP-212ENST00000599454 ZFP28Q8NHY6 868 aa18.91■□□□□ 0.62
PNKP-212ENST00000599454 SLC9A6Q92581 669 aa18.91■□□□□ 0.62
PNKP-212ENST00000599454 TACO1Q9BSH4 297 aaKnown RBP18.91■□□□□ 0.62
PNKP-212ENST00000599454 HDHD5Q9BXW7 423 aa18.91■□□□□ 0.62
PNKP-212ENST00000599454 DCDC2Q9UHG0 476 aa18.91■□□□□ 0.62
PNKP-212ENST00000599454 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.91■□□□□ 0.62
PNKP-212ENST00000599454 A0A1W2PRB8 838 aa18.9■□□□□ 0.62
PNKP-212ENST00000599454 URI1O94763 535 aaPredicted RBP18.9■□□□□ 0.62
PNKP-212ENST00000599454 SOX30O94993 753 aa18.9■□□□□ 0.62
PNKP-212ENST00000599454 PRPH2P23942 346 aa18.9■□□□□ 0.62
PNKP-212ENST00000599454 AGTR1P30556 359 aa18.9■□□□□ 0.62
PNKP-212ENST00000599454 SLC18A2Q05940 514 aa18.9■□□□□ 0.62
PNKP-212ENST00000599454 CAPRIN1Q14444 709 aaKnown RBP18.9■□□□□ 0.62
PNKP-212ENST00000599454 PLPPR5Q32ZL2 321 aa18.9■□□□□ 0.62
PNKP-212ENST00000599454 HBMQ6B0K9 141 aa18.9■□□□□ 0.62
PNKP-212ENST00000599454 TRABD2AQ86V40 505 aa18.9■□□□□ 0.62
PNKP-212ENST00000599454 OR4C3Q8NH37 302 aa18.9■□□□□ 0.62
PNKP-212ENST00000599454 AKAP1Q92667 903 aaKnown RBP eCLIP18.9■□□□□ 0.62
PNKP-212ENST00000599454 RNF145Q96MT1 663 aa18.9■□□□□ 0.62
PNKP-212ENST00000599454 MED17Q9NVC6 651 aa18.9■□□□□ 0.62
PNKP-212ENST00000599454 NTMQ9P121 344 aa18.9■□□□□ 0.62
PNKP-212ENST00000599454 ADAM21Q9UKJ8 722 aa18.9■□□□□ 0.62
PNKP-212ENST00000599454 SNX8Q9Y5X2 465 aa18.9■□□□□ 0.62
PNKP-212ENST00000599454 NPIPB8E9PQR5 432 aa18.89■□□□□ 0.61
PNKP-212ENST00000599454 TNFSF11O14788 317 aa18.89■□□□□ 0.61
PNKP-212ENST00000599454 CRLF1O75462 422 aa18.89■□□□□ 0.61
PNKP-212ENST00000599454 HSPA4LO95757 839 aa18.89■□□□□ 0.61
PNKP-212ENST00000599454 MYL2P10916 166 aa18.89■□□□□ 0.61
PNKP-212ENST00000599454 HPGDP15428 266 aa18.89■□□□□ 0.61
PNKP-212ENST00000599454 TNK1Q13470 666 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms