RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 RYDENQ9NUL5 291 aaKnown RBP13.47□□□□□ -0.25
VRK3-212ENST00000596814 RLIMQ9NVW2 624 aa13.47□□□□□ -0.25
VRK3-212ENST00000596814 C6orf203Q9P0P8 240 aaPredicted RBP13.47□□□□□ -0.25
VRK3-212ENST00000596814 DTNAQ9Y4J8 743 aa13.47□□□□□ -0.25
VRK3-212ENST00000596814 CDHR4A6H8M9 788 aa13.47□□□□□ -0.25
VRK3-212ENST00000596814 PRAMEF25A6NGN4 478 aa13.47□□□□□ -0.25
VRK3-212ENST00000596814 MAN1A2O60476 641 aa13.47□□□□□ -0.25
VRK3-212ENST00000596814 NGFRP08138 427 aa13.47□□□□□ -0.25
VRK3-212ENST00000596814 ADRB1P08588 477 aa13.47□□□□□ -0.25
VRK3-212ENST00000596814 ITGA2P17301 1181 aa13.47□□□□□ -0.25
VRK3-212ENST00000596814 TBXA2RP21731 343 aa13.47□□□□□ -0.25
VRK3-212ENST00000596814 ITGA3P26006 1051 aa13.47□□□□□ -0.25
VRK3-212ENST00000596814 SOX3P41225 446 aa13.47□□□□□ -0.25
VRK3-212ENST00000596814 SSR4P51571 173 aa13.47□□□□□ -0.25
VRK3-212ENST00000596814 RRADP55042 308 aa13.47□□□□□ -0.25
VRK3-212ENST00000596814 FBXW4P57775 412 aa13.47□□□□□ -0.25
VRK3-212ENST00000596814 SESN3P58005 492 aa13.47□□□□□ -0.25
VRK3-212ENST00000596814 SLC34A1Q06495 639 aa13.47□□□□□ -0.25
VRK3-212ENST00000596814 ZSWIM7Q19AV6 140 aa13.47□□□□□ -0.25
VRK3-212ENST00000596814 CRTC2Q53ET0 693 aaPredicted RBP13.47□□□□□ -0.25
VRK3-212ENST00000596814 OPN5Q6U736 354 aa13.47□□□□□ -0.25
VRK3-212ENST00000596814 LACC1Q8IV20 430 aa13.47□□□□□ -0.25
VRK3-212ENST00000596814 CMIPQ8IY22 773 aa13.47□□□□□ -0.25
VRK3-212ENST00000596814 LILRA2Q8N149 483 aa13.47□□□□□ -0.25
VRK3-212ENST00000596814 TMEM102Q8N9M5 508 aaPredicted RBP13.47□□□□□ -0.25
VRK3-212ENST00000596814 OR4D11Q8NGI4 311 aa13.47□□□□□ -0.25
VRK3-212ENST00000596814 OR5M3Q8NGP4 307 aa13.47□□□□□ -0.25
VRK3-212ENST00000596814 SPACA9Q96E40 222 aaPredicted RBP13.47□□□□□ -0.25
VRK3-212ENST00000596814 DPH1Q9BZG8 443 aa13.47□□□□□ -0.25
VRK3-212ENST00000596814 AMBRA1Q9C0C7 1298 aa13.47□□□□□ -0.25
VRK3-212ENST00000596814 AGPAT4Q9NRZ5 378 aa13.47□□□□□ -0.25
VRK3-212ENST00000596814 RIMS3Q9UJD0 308 aa13.47□□□□□ -0.25
VRK3-212ENST00000596814 ABCG2Q9UNQ0 655 aa13.47□□□□□ -0.25
VRK3-212ENST00000596814 SERINC4A6NH21 518 aa13.46□□□□□ -0.25
VRK3-212ENST00000596814 ARGFXA6NJG6 315 aa13.46□□□□□ -0.25
VRK3-212ENST00000596814 DEAF1O75398 565 aaPredicted RBP13.46□□□□□ -0.25
VRK3-212ENST00000596814 CST1P01037 141 aa13.46□□□□□ -0.25
VRK3-212ENST00000596814 LDLRP01130 860 aa13.46□□□□□ -0.25
VRK3-212ENST00000596814 EVI2BP34910 448 aa13.46□□□□□ -0.25
VRK3-212ENST00000596814 RGS8P57771 180 aaPredicted RBP13.46□□□□□ -0.25
VRK3-212ENST00000596814 CDC20Q12834 499 aa13.46□□□□□ -0.25
VRK3-212ENST00000596814 ATP6AP1Q15904 470 aa13.46□□□□□ -0.25
VRK3-212ENST00000596814 SNCBQ16143 134 aa13.46□□□□□ -0.25
VRK3-212ENST00000596814 NTRK2Q16620 822 aa13.46□□□□□ -0.25
VRK3-212ENST00000596814 KLHL26Q53HC5 615 aa13.46□□□□□ -0.25
VRK3-212ENST00000596814 NUP54Q7Z3B4 507 aa13.46□□□□□ -0.25
VRK3-212ENST00000596814 ASB15Q8WXK1 588 aa13.46□□□□□ -0.25
VRK3-212ENST00000596814 HGDQ93099 445 aa13.46□□□□□ -0.25
VRK3-212ENST00000596814 TMCO6Q96DC7 493 aa13.46□□□□□ -0.25
VRK3-212ENST00000596814 ZNF300Q96RE9 604 aaPredicted RBP13.46□□□□□ -0.25
VRK3-212ENST00000596814 CCNL2Q96S94 520 aaPredicted RBP13.46□□□□□ -0.25
VRK3-212ENST00000596814 LHPPQ9H008 270 aa13.46□□□□□ -0.25
VRK3-212ENST00000596814 RASSF4Q9H2L5 321 aa13.46□□□□□ -0.25
VRK3-212ENST00000596814 NDUFAF4Q9P032 175 aa13.46□□□□□ -0.25
VRK3-212ENST00000596814 POLHQ9Y253 713 aa13.46□□□□□ -0.25
VRK3-212ENST00000596814 SLC35A3Q9Y2D2 325 aa13.46□□□□□ -0.25
VRK3-212ENST00000596814 ENPP4Q9Y6X5 453 aa13.46□□□□□ -0.25
VRK3-212ENST00000596814 H3BNH8 94 aa13.45□□□□□ -0.26
VRK3-212ENST00000596814 CLOCKO15516 846 aa13.45□□□□□ -0.26
VRK3-212ENST00000596814 FRS3O43559 492 aa13.45□□□□□ -0.26
VRK3-212ENST00000596814 OR6B1O95007 311 aa13.45□□□□□ -0.26
VRK3-212ENST00000596814 DIRAS1O95057 198 aa13.45□□□□□ -0.26
VRK3-212ENST00000596814 PLAURQ03405 335 aa13.45□□□□□ -0.26
VRK3-212ENST00000596814 MEP1AQ16819 746 aa13.45□□□□□ -0.26
VRK3-212ENST00000596814 IQCCQ4KMZ1 466 aa13.45□□□□□ -0.26
VRK3-212ENST00000596814 B3GNTL1Q67FW5 361 aaPredicted RBP13.45□□□□□ -0.26
VRK3-212ENST00000596814 HMBOX1Q6NT76 420 aa13.45□□□□□ -0.26
VRK3-212ENST00000596814 DEF8Q6ZN54 512 aa13.45□□□□□ -0.26
VRK3-212ENST00000596814 AMIGO2Q86SJ2 522 aa13.45□□□□□ -0.26
VRK3-212ENST00000596814 RBM45Q8IUH3 476 aaKnown RBP13.45□□□□□ -0.26
VRK3-212ENST00000596814 GRAMD2AQ8IUY3 354 aa13.45□□□□□ -0.26
VRK3-212ENST00000596814 DND1Q8IYX4 353 aaKnown RBP13.45□□□□□ -0.26
VRK3-212ENST00000596814 TMEM156Q8N614 296 aa13.45□□□□□ -0.26
VRK3-212ENST00000596814 POGLUT1Q8NBL1 392 aa13.45□□□□□ -0.26
VRK3-212ENST00000596814 OR6T1Q8NGN1 323 aa13.45□□□□□ -0.26
VRK3-212ENST00000596814 PSMF1Q92530 271 aa13.45□□□□□ -0.26
VRK3-212ENST00000596814 TTC9Q92623 222 aa13.45□□□□□ -0.26
VRK3-212ENST00000596814 WFDC6Q9BQY6 131 aa13.45□□□□□ -0.26
VRK3-212ENST00000596814 TBL1XR1Q9BZK7 514 aa13.45□□□□□ -0.26
VRK3-212ENST00000596814 EVA1AQ9H8M9 152 aa13.45□□□□□ -0.26
VRK3-212ENST00000596814 DKK4Q9UBT3 224 aa13.45□□□□□ -0.26
VRK3-212ENST00000596814 TEKT2Q9UIF3 430 aa13.45□□□□□ -0.26
VRK3-212ENST00000596814 CPAMD8Q8IZJ3 1885 aa13.45□□□□□ -0.26
VRK3-212ENST00000596814 A0A1W2PQD3 144 aa13.44□□□□□ -0.26
VRK3-212ENST00000596814 ALG1L2C9J202 215 aa13.44□□□□□ -0.26
VRK3-212ENST00000596814 BCAS1O75363 584 aaPredicted RBP13.44□□□□□ -0.26
VRK3-212ENST00000596814 CSTAP01040 98 aa13.44□□□□□ -0.26
VRK3-212ENST00000596814 ADH7P40394 386 aa13.44□□□□□ -0.26
VRK3-212ENST00000596814 CD226Q15762 336 aa13.44□□□□□ -0.26
VRK3-212ENST00000596814 NPTX1Q15818 432 aa13.44□□□□□ -0.26
VRK3-212ENST00000596814 ZNF791Q3KP31 576 aaPredicted RBP13.44□□□□□ -0.26
VRK3-212ENST00000596814 ACER2Q5QJU3 275 aa13.44□□□□□ -0.26
VRK3-212ENST00000596814 FNDC7Q5VTL7 733 aa13.44□□□□□ -0.26
VRK3-212ENST00000596814 OR2T5Q6IEZ7 315 aa13.44□□□□□ -0.26
VRK3-212ENST00000596814 APOOLQ6UXV4 268 aa13.44□□□□□ -0.26
VRK3-212ENST00000596814 TSEN54Q7Z6J9 526 aaKnown RBP13.44□□□□□ -0.26
VRK3-212ENST00000596814 GATSQ8NAP1 163 aa13.44□□□□□ -0.26
VRK3-212ENST00000596814 OR10G3Q8NGC4 313 aa13.44□□□□□ -0.26
VRK3-212ENST00000596814 OR2T29Q8NH02 315 aa13.44□□□□□ -0.26
VRK3-212ENST00000596814 PHOSPHO1Q8TCT1 267 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms