RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 FAM107BQ9H098 131 aa10.09□□□□□ -0.79
LIG1-211ENST00000596457 RABEP2Q9H5N1 569 aa10.09□□□□□ -0.79
LIG1-211ENST00000596457 CCDC134Q9H6E4 229 aa10.09□□□□□ -0.79
LIG1-211ENST00000596457 ACKR4Q9NPB9 350 aa10.09□□□□□ -0.79
LIG1-211ENST00000596457 UBQLN4Q9NRR5 601 aa10.09□□□□□ -0.79
LIG1-211ENST00000596457 PLSCR2Q9NRY7 297 aa10.09□□□□□ -0.79
LIG1-211ENST00000596457 PNPLA3Q9NST1 481 aa10.09□□□□□ -0.79
LIG1-211ENST00000596457 TAS2R10Q9NYW0 307 aa10.09□□□□□ -0.79
LIG1-211ENST00000596457 SUCOQ9UBS9 1254 aaKnown RBP10.09□□□□□ -0.79
LIG1-211ENST00000596457 PLEKHB1Q9UF11 243 aaPredicted RBP10.09□□□□□ -0.79
LIG1-211ENST00000596457 MKLN1Q9UL63 735 aa10.09□□□□□ -0.79
LIG1-211ENST00000596457 SVILO95425 2214 aa10.09□□□□□ -0.79
LIG1-211ENST00000596457 A0A1B0GVC2 190 aa10.08□□□□□ -0.8
LIG1-211ENST00000596457 GTPBP1O00178 669 aaKnown RBP10.08□□□□□ -0.8
LIG1-211ENST00000596457 AQP7O14520 342 aa10.08□□□□□ -0.8
LIG1-211ENST00000596457 BCKDKO14874 412 aa10.08□□□□□ -0.8
LIG1-211ENST00000596457 FCMRO60667 390 aa10.08□□□□□ -0.8
LIG1-211ENST00000596457 ZG16O60844 167 aa10.08□□□□□ -0.8
LIG1-211ENST00000596457 STX11O75558 287 aa10.08□□□□□ -0.8
LIG1-211ENST00000596457 CYP7B1O75881 506 aa10.08□□□□□ -0.8
LIG1-211ENST00000596457 AGR2O95994 175 aa10.08□□□□□ -0.8
LIG1-211ENST00000596457 CAPN3P20807 821 aa10.08□□□□□ -0.8
LIG1-211ENST00000596457 ENDOUP21128 410 aaKnown RBP10.08□□□□□ -0.8
LIG1-211ENST00000596457 GCKP35557 465 aa10.08□□□□□ -0.8
LIG1-211ENST00000596457 MRPL19P49406 292 aaKnown RBP10.08□□□□□ -0.8
LIG1-211ENST00000596457 ANXA11P50995 505 aaKnown RBP10.08□□□□□ -0.8
LIG1-211ENST00000596457 SEC24CP53992 1094 aa10.08□□□□□ -0.8
LIG1-211ENST00000596457 ATP12AP54707 1039 aa10.08□□□□□ -0.8
LIG1-211ENST00000596457 HPCAP84074 193 aa10.08□□□□□ -0.8
LIG1-211ENST00000596457 SRYQ05066 204 aa10.08□□□□□ -0.8
LIG1-211ENST00000596457 SYPL1Q16563 259 aa10.08□□□□□ -0.8
LIG1-211ENST00000596457 PAGE3Q5JUK9 113 aa10.08□□□□□ -0.8
LIG1-211ENST00000596457 ZNF527Q8NB42 609 aa10.08□□□□□ -0.8
LIG1-211ENST00000596457 CHDHQ8NE62 594 aaPredicted RBP10.08□□□□□ -0.8
LIG1-211ENST00000596457 OR2M3Q8NG83 312 aa10.08□□□□□ -0.8
LIG1-211ENST00000596457 OR5M1Q8NGP8 315 aa10.08□□□□□ -0.8
LIG1-211ENST00000596457 MIPOL1Q8TD10 442 aa10.08□□□□□ -0.8
LIG1-211ENST00000596457 RNF138Q8WVD3 245 aa10.08□□□□□ -0.8
LIG1-211ENST00000596457 ABTB1Q969K4 478 aaPredicted RBP10.08□□□□□ -0.8
LIG1-211ENST00000596457 RELTQ969Z4 430 aa10.08□□□□□ -0.8
LIG1-211ENST00000596457 ROPN1LQ96C74 230 aa10.08□□□□□ -0.8
LIG1-211ENST00000596457 DTNBP1Q96EV8 351 aa10.08□□□□□ -0.8
LIG1-211ENST00000596457 PHF12Q96QT6 1004 aa10.08□□□□□ -0.8
LIG1-211ENST00000596457 HOXD1Q9GZZ0 328 aa10.08□□□□□ -0.8
LIG1-211ENST00000596457 PAIP1Q9H074 479 aaKnown RBP10.08□□□□□ -0.8
LIG1-211ENST00000596457 UBQLN3Q9H347 655 aa10.08□□□□□ -0.8
LIG1-211ENST00000596457 PTGES2Q9H7Z7 377 aa10.08□□□□□ -0.8
LIG1-211ENST00000596457 TPT1P8Q9HAU6 139 aa10.08□□□□□ -0.8
LIG1-211ENST00000596457 CAMK2AQ9UQM7 478 aa10.08□□□□□ -0.8
LIG1-211ENST00000596457 PCDHB14Q9Y5E9 798 aa10.08□□□□□ -0.8
LIG1-211ENST00000596457 POLQO75417 2590 aa10.08□□□□□ -0.8
LIG1-211ENST00000596457 A1L4Q6 167 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 OR14I1A6ND48 311 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 B4DXG7 233 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 SHISA8B8ZZ34 492 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 ALG1L2C9J202 215 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 H3BNH8 94 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 CLIC1O00299 241 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 HMGN4O00479 90 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 ANGPT2O15123 496 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 NUDT14O95848 222 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 AK1P00568 194 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 LDLRP01130 860 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 ZCCHC18P0CG32 403 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 RNF224P0DH78 156 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 NR2F1P10589 423 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 ETFAP13804 333 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 BMP7P18075 431 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 LCN1P31025 176 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 SRD5A2P31213 254 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 STARP49675 285 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 DSCR4P56555 118 aaPredicted RBP10.07□□□□□ -0.8
LIG1-211ENST00000596457 GNGT1P63211 74 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 IRX1P78414 480 aaPredicted RBP10.07□□□□□ -0.8
LIG1-211ENST00000596457 RCAN2Q14206 197 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 EMC4Q5J8M3 183 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 PDZK1Q5T2W1 519 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 RAET1LQ5VY80 246 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 METTL21CQ5VZV1 264 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 IFNEQ86WN2 208 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 TMCO5AQ8N6Q1 288 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 ANKFN1Q8N957 763 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 FADS6Q8N9I5 356 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 STON2Q8WXE9 905 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 CCDC120Q96HB5 630 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 SFXN2Q96NB2 322 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 ZNF317Q96PQ6 595 aaPredicted RBP10.07□□□□□ -0.8
LIG1-211ENST00000596457 ELAC2Q9BQ52 826 aaKnown RBP10.07□□□□□ -0.8
LIG1-211ENST00000596457 UGT2B28Q9BY64 529 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 OR2B2Q9GZK3 357 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 TP63Q9H3D4 680 aaPredicted RBP10.07□□□□□ -0.8
LIG1-211ENST00000596457 ZNF385DQ9H6B1 395 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 SLAMF8Q9P0V8 285 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 KLHL14Q9P2G3 628 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.07□□□□□ -0.8
LIG1-211ENST00000596457 LEF1Q9UJU2 399 aaPredicted RBP10.07□□□□□ -0.8
LIG1-211ENST00000596457 VDAC3Q9Y277 283 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 CARD8Q9Y2G2 431 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 MEMO1Q9Y316 297 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 NDUFAF1Q9Y375 327 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms